RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 CLIP1P30622 1438 aa14.85□□□□□ -0.03
CNEP1R1-206ENST00000565556 PCGF6Q9BYE7 350 aa14.84□□□□□ -0.03
CNEP1R1-206ENST00000565556 GRIN2AQ12879 1464 aa14.82□□□□□ -0.04
CNEP1R1-206ENST00000565556 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
CNEP1R1-206ENST00000565556 RANGAP1P46060 587 aaPredicted RBP14.76□□□□□ -0.05
CNEP1R1-206ENST00000565556 FBLN2P98095 1184 aa14.76□□□□□ -0.05
CNEP1R1-206ENST00000565556 KIAA0586Q9BVV6 1533 aa14.74□□□□□ -0.05
CNEP1R1-206ENST00000565556 IQGAP2Q13576 1575 aa14.74□□□□□ -0.05
CNEP1R1-206ENST00000565556 EFCAB5A4FU69 1503 aa14.74□□□□□ -0.05
CNEP1R1-206ENST00000565556 CHD1O14646 1710 aa14.73□□□□□ -0.05
CNEP1R1-206ENST00000565556 NUP160Q12769 1436 aa14.73□□□□□ -0.05
CNEP1R1-206ENST00000565556 ARHGAP35Q9NRY4 1499 aa14.73□□□□□ -0.05
CNEP1R1-206ENST00000565556 CEP170Q5SW79 1584 aa14.71□□□□□ -0.05
CNEP1R1-206ENST00000565556 ARAP1Q96P48 1450 aa14.69□□□□□ -0.06
CNEP1R1-206ENST00000565556 VPS8Q8N3P4 1428 aa14.69□□□□□ -0.06
CNEP1R1-206ENST00000565556 SAMD9Q5K651 1589 aa14.68□□□□□ -0.06
CNEP1R1-206ENST00000565556 UGGT2Q9NYU1 1516 aa14.68□□□□□ -0.06
CNEP1R1-206ENST00000565556 P3H3Q8IVL6 736 aa14.61□□□□□ -0.07
CNEP1R1-206ENST00000565556 FHOD3Q2V2M9 1422 aa14.61□□□□□ -0.07
CNEP1R1-206ENST00000565556 FMN1Q68DA7 1419 aa14.61□□□□□ -0.07
CNEP1R1-206ENST00000565556 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
CNEP1R1-206ENST00000565556 TRIM26Q12899 539 aaPredicted RBP14.6□□□□□ -0.07
CNEP1R1-206ENST00000565556 PPARGC1BQ86YN6 1023 aaKnown RBP14.6□□□□□ -0.07
CNEP1R1-206ENST00000565556 KIAA0556O60303 1618 aa14.59□□□□□ -0.07
CNEP1R1-206ENST00000565556 APLP2Q06481 763 aa14.58□□□□□ -0.07
CNEP1R1-206ENST00000565556 CARMIL2Q6F5E8 1435 aa14.58□□□□□ -0.08
CNEP1R1-206ENST00000565556 DISP1Q96F81 1524 aa14.58□□□□□ -0.08
CNEP1R1-206ENST00000565556 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
CNEP1R1-206ENST00000565556 SHROOM2Q13796 1616 aa14.56□□□□□ -0.08
CNEP1R1-206ENST00000565556 FYCO1Q9BQS8 1478 aa14.54□□□□□ -0.08
CNEP1R1-206ENST00000565556 CASKIN1Q8WXD9 1431 aa14.54□□□□□ -0.08
CNEP1R1-206ENST00000565556 PCF11O94913 1555 aaKnown RBP14.52□□□□□ -0.08
CNEP1R1-206ENST00000565556 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
CNEP1R1-206ENST00000565556 PRG4Q92954 1404 aaPredicted RBP14.52□□□□□ -0.09
CNEP1R1-206ENST00000565556 MAP3K1Q13233 1512 aa14.51□□□□□ -0.09
CNEP1R1-206ENST00000565556 ATP1B4Q9UN42 357 aaPredicted RBP14.46□□□□□ -0.09
CNEP1R1-206ENST00000565556 HECW1Q76N89 1606 aa14.46□□□□□ -0.09
CNEP1R1-206ENST00000565556 TIAM1Q13009 1591 aa14.46□□□□□ -0.09
CNEP1R1-206ENST00000565556 ZEB1P37275 1124 aaPredicted RBP14.46□□□□□ -0.1
CNEP1R1-206ENST00000565556 CFAP43Q8NDM7 1665 aa14.45□□□□□ -0.1
CNEP1R1-206ENST00000565556 RAPGEF6Q8TEU7 1601 aa14.43□□□□□ -0.1
CNEP1R1-206ENST00000565556 CCDC18Q5T9S5 1454 aa14.43□□□□□ -0.1
CNEP1R1-206ENST00000565556 PTPRGP23470 1445 aa14.43□□□□□ -0.1
CNEP1R1-206ENST00000565556 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
CNEP1R1-206ENST00000565556 LRRIQ1Q96JM4 1722 aa14.4□□□□□ -0.1
CNEP1R1-206ENST00000565556 ERCC6L2Q5T890 1561 aa14.4□□□□□ -0.1
CNEP1R1-206ENST00000565556 KANK4Q5T7N3 995 aaPredicted RBP14.39□□□□□ -0.11
CNEP1R1-206ENST00000565556 ABCA8O94911 1581 aa14.39□□□□□ -0.11
CNEP1R1-206ENST00000565556 LRRC9Q6ZRR7 1453 aa14.39□□□□□ -0.11
CNEP1R1-206ENST00000565556 EPRSP07814 1512 aaKnown RBP14.39□□□□□ -0.11
CNEP1R1-206ENST00000565556 PLB1Q6P1J6 1458 aa14.38□□□□□ -0.11
CNEP1R1-206ENST00000565556 NUP153P49790 1475 aaKnown RBP14.37□□□□□ -0.11
CNEP1R1-206ENST00000565556 UACAQ9BZF9 1416 aa14.34□□□□□ -0.11
CNEP1R1-206ENST00000565556 MTUS2Q5JR59 1369 aa14.34□□□□□ -0.11
CNEP1R1-206ENST00000565556 CDK11AQ9UQ88 783 aaPredicted RBP14.33□□□□□ -0.12
CNEP1R1-206ENST00000565556 CDK13Q14004 1512 aaKnown RBP14.32□□□□□ -0.12
CNEP1R1-206ENST00000565556 EHBP1L1Q8N3D4 1523 aa14.32□□□□□ -0.12
CNEP1R1-206ENST00000565556 ABCC2Q92887 1545 aa14.31□□□□□ -0.12
CNEP1R1-206ENST00000565556 UHRF1BP1LA0JNW5 1464 aa14.31□□□□□ -0.12
CNEP1R1-206ENST00000565556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
CNEP1R1-206ENST00000565556 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
CNEP1R1-206ENST00000565556 SUPT6HQ7KZ85 1726 aaKnown RBP14.29□□□□□ -0.12
CNEP1R1-206ENST00000565556 ARID3CA6NKF2 412 aa14.28□□□□□ -0.12
CNEP1R1-206ENST00000565556 ATP10BO94823 1461 aa14.28□□□□□ -0.12
CNEP1R1-206ENST00000565556 MAGI3Q5TCQ9 1506 aa14.27□□□□□ -0.13
CNEP1R1-206ENST00000565556 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
CNEP1R1-206ENST00000565556 PLEKHD1A6NEE1 506 aa14.24□□□□□ -0.13
CNEP1R1-206ENST00000565556 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
CNEP1R1-206ENST00000565556 NCOA2Q15596 1464 aa14.23□□□□□ -0.13
CNEP1R1-206ENST00000565556 KDM5BQ9UGL1 1544 aa14.23□□□□□ -0.13
CNEP1R1-206ENST00000565556 RRBP1Q9P2E9 1410 aaKnown RBP14.23□□□□□ -0.13
CNEP1R1-206ENST00000565556 PHLDB1Q86UU1 1377 aa14.21□□□□□ -0.13
CNEP1R1-206ENST00000565556 ADCY10Q96PN6 1610 aa14.21□□□□□ -0.13
CNEP1R1-206ENST00000565556 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
CNEP1R1-206ENST00000565556 ZCCHC11Q5TAX3 1644 aaKnown RBP14.2□□□□□ -0.14
CNEP1R1-206ENST00000565556 CCNB3Q8WWL7 1395 aa14.19□□□□□ -0.14
CNEP1R1-206ENST00000565556 MYOM3Q5VTT5 1437 aa14.19□□□□□ -0.14
CNEP1R1-206ENST00000565556 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
CNEP1R1-206ENST00000565556 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
CNEP1R1-206ENST00000565556 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
CNEP1R1-206ENST00000565556 KIF14Q15058 1648 aa14.17□□□□□ -0.14
CNEP1R1-206ENST00000565556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.16□□□□□ -0.14
CNEP1R1-206ENST00000565556 FGD6Q6ZV73 1430 aa14.16□□□□□ -0.14
CNEP1R1-206ENST00000565556 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
CNEP1R1-206ENST00000565556 PELP1Q8IZL8 1130 aaKnown RBP14.14□□□□□ -0.15
CNEP1R1-206ENST00000565556 MIA2Q96PC5 1412 aa14.14□□□□□ -0.15
CNEP1R1-206ENST00000565556 ITSN2Q9NZM3 1697 aa14.13□□□□□ -0.15
CNEP1R1-206ENST00000565556 FAM50AQ14320 339 aaKnown RBP14.11□□□□□ -0.15
CNEP1R1-206ENST00000565556 ABCC10Q5T3U5 1492 aa14.11□□□□□ -0.15
CNEP1R1-206ENST00000565556 PTPN23Q9H3S7 1636 aa14.1□□□□□ -0.15
CNEP1R1-206ENST00000565556 CYB5RLQ6IPT4 315 aa14.1□□□□□ -0.15
CNEP1R1-206ENST00000565556 TCOF1Q13428 1488 aaKnown RBP14.09□□□□□ -0.15
CNEP1R1-206ENST00000565556 GPATCH8Q9UKJ3 1502 aaKnown RBP14.09□□□□□ -0.15
CNEP1R1-206ENST00000565556 WDR7Q9Y4E6 1490 aa14.09□□□□□ -0.15
CNEP1R1-206ENST00000565556 CDC42BPAQ5VT25 1732 aa14.08□□□□□ -0.16
CNEP1R1-206ENST00000565556 ASXL2Q76L83 1435 aa14.07□□□□□ -0.16
CNEP1R1-206ENST00000565556 KCNH8Q96L42 1107 aa14.07□□□□□ -0.16
CNEP1R1-206ENST00000565556 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
CNEP1R1-206ENST00000565556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.06□□□□□ -0.16
CNEP1R1-206ENST00000565556 MYO5CQ9NQX4 1742 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms