RNA–Protein interactions for RNA: ENST00000564969.5

FANCA-217, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 850 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-217ENST00000564969 KIAA0586Q9BVV6 1533 aa18.1■□□□□ 0.49
FANCA-217ENST00000564969 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
FANCA-217ENST00000564969 CEP162Q5TB80 1403 aa18.05■□□□□ 0.48
FANCA-217ENST00000564969 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
FANCA-217ENST00000564969 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
FANCA-217ENST00000564969 CLIP1P30622 1438 aa18.03■□□□□ 0.48
FANCA-217ENST00000564969 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
FANCA-217ENST00000564969 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
FANCA-217ENST00000564969 CHD1O14646 1710 aa17.98■□□□□ 0.47
FANCA-217ENST00000564969 UGGT2Q9NYU1 1516 aa17.95■□□□□ 0.46
FANCA-217ENST00000564969 CTTNBP2Q8WZ74 1663 aa17.95■□□□□ 0.46
FANCA-217ENST00000564969 ARHGAP35Q9NRY4 1499 aa17.93■□□□□ 0.46
FANCA-217ENST00000564969 EFCAB5A4FU69 1503 aa17.92■□□□□ 0.46
FANCA-217ENST00000564969 CARMIL2Q6F5E8 1435 aa17.91■□□□□ 0.46
FANCA-217ENST00000564969 P3H3Q8IVL6 736 aa17.91■□□□□ 0.46
FANCA-217ENST00000564969 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
FANCA-217ENST00000564969 PRG4Q92954 1404 aaPredicted RBP17.88■□□□□ 0.45
FANCA-217ENST00000564969 ARAP1Q96P48 1450 aa17.86■□□□□ 0.45
FANCA-217ENST00000564969 DISP1Q96F81 1524 aa17.86■□□□□ 0.45
FANCA-217ENST00000564969 SAMD9Q5K651 1589 aa17.85■□□□□ 0.45
FANCA-217ENST00000564969 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
FANCA-217ENST00000564969 FHOD3Q2V2M9 1422 aa17.83■□□□□ 0.45
FANCA-217ENST00000564969 SHROOM2Q13796 1616 aa17.82■□□□□ 0.44
FANCA-217ENST00000564969 FMN1Q68DA7 1419 aa17.81■□□□□ 0.44
FANCA-217ENST00000564969 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
FANCA-217ENST00000564969 KIAA0556O60303 1618 aa17.79■□□□□ 0.44
FANCA-217ENST00000564969 PTPRGP23470 1445 aa17.77■□□□□ 0.44
FANCA-217ENST00000564969 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
FANCA-217ENST00000564969 APLP2Q06481 763 aa17.73■□□□□ 0.43
FANCA-217ENST00000564969 CASKIN1Q8WXD9 1431 aa17.72■□□□□ 0.43
FANCA-217ENST00000564969 ATP1B4Q9UN42 357 aaPredicted RBP17.7■□□□□ 0.42
FANCA-217ENST00000564969 ERCC6L2Q5T890 1561 aa17.69■□□□□ 0.42
FANCA-217ENST00000564969 FYCO1Q9BQS8 1478 aa17.65■□□□□ 0.42
FANCA-217ENST00000564969 UACAQ9BZF9 1416 aa17.64■□□□□ 0.42
FANCA-217ENST00000564969 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
FANCA-217ENST00000564969 PLB1Q6P1J6 1458 aa17.63■□□□□ 0.41
FANCA-217ENST00000564969 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
FANCA-217ENST00000564969 ABCA8O94911 1581 aa17.59■□□□□ 0.41
FANCA-217ENST00000564969 MAP3K1Q13233 1512 aa17.59■□□□□ 0.41
FANCA-217ENST00000564969 PCF11O94913 1555 aaKnown RBP17.58■□□□□ 0.41
FANCA-217ENST00000564969 UHRF1BP1LA0JNW5 1464 aa17.58■□□□□ 0.41
FANCA-217ENST00000564969 NUP153P49790 1475 aaKnown RBP17.57■□□□□ 0.4
FANCA-217ENST00000564969 CDK11AQ9UQ88 783 aaPredicted RBP17.57■□□□□ 0.4
FANCA-217ENST00000564969 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
FANCA-217ENST00000564969 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
FANCA-217ENST00000564969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
FANCA-217ENST00000564969 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
FANCA-217ENST00000564969 CYB5RLQ6IPT4 315 aa17.56■□□□□ 0.4
FANCA-217ENST00000564969 EPRSP07814 1512 aaKnown RBP17.56■□□□□ 0.4
FANCA-217ENST00000564969 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
FANCA-217ENST00000564969 ABCC2Q92887 1545 aa17.54■□□□□ 0.4
FANCA-217ENST00000564969 ARID3CA6NKF2 412 aa17.53■□□□□ 0.4
FANCA-217ENST00000564969 KANK4Q5T7N3 995 aaPredicted RBP17.53■□□□□ 0.4
FANCA-217ENST00000564969 DNAJC5Q9H3Z4 198 aa17.53■□□□□ 0.4
FANCA-217ENST00000564969 ATP10BO94823 1461 aa17.52■□□□□ 0.4
FANCA-217ENST00000564969 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.4
FANCA-217ENST00000564969 PLEKHD1A6NEE1 506 aa17.51■□□□□ 0.39
FANCA-217ENST00000564969 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
FANCA-217ENST00000564969 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
FANCA-217ENST00000564969 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
FANCA-217ENST00000564969 PPARGC1BQ86YN6 1023 aaKnown RBP17.5■□□□□ 0.39
FANCA-217ENST00000564969 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
FANCA-217ENST00000564969 KDM5BQ9UGL1 1544 aa17.48■□□□□ 0.39
FANCA-217ENST00000564969 MTUS2Q5JR59 1369 aa17.48■□□□□ 0.39
FANCA-217ENST00000564969 LRRC9Q6ZRR7 1453 aa17.48■□□□□ 0.39
FANCA-217ENST00000564969 CDK13Q14004 1512 aaKnown RBP17.46■□□□□ 0.39
FANCA-217ENST00000564969 TROQ12816 1431 aaPredicted RBP17.41■□□□□ 0.38
FANCA-217ENST00000564969 ADCY10Q96PN6 1610 aa17.41■□□□□ 0.38
FANCA-217ENST00000564969 CFAP43Q8NDM7 1665 aa17.4■□□□□ 0.38
FANCA-217ENST00000564969 EHBP1L1Q8N3D4 1523 aa17.38■□□□□ 0.37
FANCA-217ENST00000564969 LRRIQ1Q96JM4 1722 aa17.36■□□□□ 0.37
FANCA-217ENST00000564969 MAGI3Q5TCQ9 1506 aa17.36■□□□□ 0.37
FANCA-217ENST00000564969 KCNH8Q96L42 1107 aa17.34■□□□□ 0.37
FANCA-217ENST00000564969 ZCCHC11Q5TAX3 1644 aaKnown RBP17.33■□□□□ 0.37
FANCA-217ENST00000564969 NCOA2Q15596 1464 aa17.33■□□□□ 0.37
FANCA-217ENST00000564969 ASXL2Q76L83 1435 aa17.33■□□□□ 0.36
FANCA-217ENST00000564969 TRIM26Q12899 539 aaPredicted RBP17.33■□□□□ 0.36
FANCA-217ENST00000564969 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
FANCA-217ENST00000564969 PHLDB1Q86UU1 1377 aa17.29■□□□□ 0.36
FANCA-217ENST00000564969 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
FANCA-217ENST00000564969 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.35
FANCA-217ENST00000564969 MAPKBP1O60336 1514 aa17.26■□□□□ 0.35
FANCA-217ENST00000564969 ABCC10Q5T3U5 1492 aa17.25■□□□□ 0.35
FANCA-217ENST00000564969 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
FANCA-217ENST00000564969 CFDP1Q9UEE9 299 aaPredicted RBP17.24■□□□□ 0.35
FANCA-217ENST00000564969 KIF14Q15058 1648 aa17.24■□□□□ 0.35
FANCA-217ENST00000564969 MIA2Q96PC5 1412 aa17.23■□□□□ 0.35
FANCA-217ENST00000564969 RRBP1Q9P2E9 1410 aaKnown RBP17.23■□□□□ 0.35
FANCA-217ENST00000564969 GPATCH8Q9UKJ3 1502 aaKnown RBP17.22■□□□□ 0.35
FANCA-217ENST00000564969 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.34
FANCA-217ENST00000564969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
FANCA-217ENST00000564969 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.34
FANCA-217ENST00000564969 PLCH2O75038 1416 aa17.19■□□□□ 0.34
FANCA-217ENST00000564969 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
FANCA-217ENST00000564969 EFCAB2Q5VUJ9 269 aa17.18■□□□□ 0.34
FANCA-217ENST00000564969 FAM69CQ0P6D2 419 aa17.17■□□□□ 0.34
FANCA-217ENST00000564969 PCGF6Q9BYE7 350 aa17.15■□□□□ 0.34
FANCA-217ENST00000564969 CD109Q6YHK3 1445 aa17.14■□□□□ 0.33
FANCA-217ENST00000564969 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
FANCA-217ENST00000564969 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms