RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 ARHGAP35Q9NRY4 1499 aa17.84■□□□□ 0.45
SNX29-204ENST00000564791 ARAP1Q96P48 1450 aa17.83■□□□□ 0.44
SNX29-204ENST00000564791 CHMP7Q8WUX9 453 aaPredicted RBP17.8■□□□□ 0.44
SNX29-204ENST00000564791 CHD1O14646 1710 aa17.8■□□□□ 0.44
SNX29-204ENST00000564791 IQGAP2Q13576 1575 aa17.8■□□□□ 0.44
SNX29-204ENST00000564791 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
SNX29-204ENST00000564791 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
SNX29-204ENST00000564791 VPS8Q8N3P4 1428 aa17.78■□□□□ 0.44
SNX29-204ENST00000564791 FBLN2P98095 1184 aa17.77■□□□□ 0.44
SNX29-204ENST00000564791 SAMD9Q5K651 1589 aa17.75■□□□□ 0.43
SNX29-204ENST00000564791 KIAA0586Q9BVV6 1533 aa17.75■□□□□ 0.43
SNX29-204ENST00000564791 NUP160Q12769 1436 aa17.75■□□□□ 0.43
SNX29-204ENST00000564791 UGGT2Q9NYU1 1516 aa17.7■□□□□ 0.42
SNX29-204ENST00000564791 FHOD3Q2V2M9 1422 aa17.7■□□□□ 0.42
SNX29-204ENST00000564791 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
SNX29-204ENST00000564791 KIAA0556O60303 1618 aa17.63■□□□□ 0.41
SNX29-204ENST00000564791 DISP1Q96F81 1524 aa17.62■□□□□ 0.41
SNX29-204ENST00000564791 PCF11O94913 1555 aaKnown RBP17.62■□□□□ 0.41
SNX29-204ENST00000564791 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
SNX29-204ENST00000564791 FMN1Q68DA7 1419 aa17.59■□□□□ 0.41
SNX29-204ENST00000564791 CLASP1Q7Z460 1538 aa17.56■□□□□ 0.4
SNX29-204ENST00000564791 JPH4Q96JJ6 628 aa17.56■□□□□ 0.4
SNX29-204ENST00000564791 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
SNX29-204ENST00000564791 SHROOM2Q13796 1616 aa17.56■□□□□ 0.4
SNX29-204ENST00000564791 APLP2Q06481 763 aa17.54■□□□□ 0.4
SNX29-204ENST00000564791 CASKIN1Q8WXD9 1431 aa17.54■□□□□ 0.4
SNX29-204ENST00000564791 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.4
SNX29-204ENST00000564791 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.39
SNX29-204ENST00000564791 TIAM1Q13009 1591 aa17.51■□□□□ 0.39
SNX29-204ENST00000564791 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
SNX29-204ENST00000564791 LRRIQ1Q96JM4 1722 aa17.5■□□□□ 0.39
SNX29-204ENST00000564791 PRG4Q92954 1404 aaPredicted RBP17.49■□□□□ 0.39
SNX29-204ENST00000564791 MAP3K1Q13233 1512 aa17.49■□□□□ 0.39
SNX29-204ENST00000564791 HECW1Q76N89 1606 aa17.47■□□□□ 0.39
SNX29-204ENST00000564791 TRIM26Q12899 539 aaPredicted RBP17.46■□□□□ 0.39
SNX29-204ENST00000564791 ATP1B4Q9UN42 357 aaPredicted RBP17.46■□□□□ 0.39
SNX29-204ENST00000564791 ERCC6L2Q5T890 1561 aa17.44■□□□□ 0.38
SNX29-204ENST00000564791 RAPGEF6Q8TEU7 1601 aa17.44■□□□□ 0.38
SNX29-204ENST00000564791 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
SNX29-204ENST00000564791 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
SNX29-204ENST00000564791 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
SNX29-204ENST00000564791 CCDC18Q5T9S5 1454 aa17.39■□□□□ 0.37
SNX29-204ENST00000564791 PLB1Q6P1J6 1458 aa17.38■□□□□ 0.37
SNX29-204ENST00000564791 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
SNX29-204ENST00000564791 ABCA8O94911 1581 aa17.38■□□□□ 0.37
SNX29-204ENST00000564791 EPRSP07814 1512 aaKnown RBP17.38■□□□□ 0.37
SNX29-204ENST00000564791 NUP153P49790 1475 aaKnown RBP17.37■□□□□ 0.37
SNX29-204ENST00000564791 CDK13Q14004 1512 aaKnown RBP17.36■□□□□ 0.37
SNX29-204ENST00000564791 PTPRGP23470 1445 aa17.36■□□□□ 0.37
SNX29-204ENST00000564791 MAGI3Q5TCQ9 1506 aa17.31■□□□□ 0.36
SNX29-204ENST00000564791 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
SNX29-204ENST00000564791 ARID3CA6NKF2 412 aa17.31■□□□□ 0.36
SNX29-204ENST00000564791 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
SNX29-204ENST00000564791 UACAQ9BZF9 1416 aa17.27■□□□□ 0.36
SNX29-204ENST00000564791 SUPT6HQ7KZ85 1726 aaKnown RBP17.26■□□□□ 0.35
SNX29-204ENST00000564791 ABCC2Q92887 1545 aa17.25■□□□□ 0.35
SNX29-204ENST00000564791 PHLDB1Q86UU1 1377 aa17.24■□□□□ 0.35
SNX29-204ENST00000564791 ATP10BO94823 1461 aa17.23■□□□□ 0.35
SNX29-204ENST00000564791 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
SNX29-204ENST00000564791 NCOA2Q15596 1464 aa17.22■□□□□ 0.35
SNX29-204ENST00000564791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
SNX29-204ENST00000564791 ARHGEF11O15085 1522 aa17.21■□□□□ 0.35
SNX29-204ENST00000564791 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
SNX29-204ENST00000564791 UHRF1BP1LA0JNW5 1464 aa17.2■□□□□ 0.34
SNX29-204ENST00000564791 CDK11AQ9UQ88 783 aaPredicted RBP17.18■□□□□ 0.34
SNX29-204ENST00000564791 TROQ12816 1431 aaPredicted RBP17.18■□□□□ 0.34
SNX29-204ENST00000564791 ADCY10Q96PN6 1610 aa17.17■□□□□ 0.34
SNX29-204ENST00000564791 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
SNX29-204ENST00000564791 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
SNX29-204ENST00000564791 KIF14Q15058 1648 aa17.15■□□□□ 0.34
SNX29-204ENST00000564791 MYOM3Q5VTT5 1437 aa17.14■□□□□ 0.33
SNX29-204ENST00000564791 KDM5BQ9UGL1 1544 aa17.13■□□□□ 0.33
SNX29-204ENST00000564791 FGD6Q6ZV73 1430 aa17.12■□□□□ 0.33
SNX29-204ENST00000564791 PLEKHD1A6NEE1 506 aa17.1■□□□□ 0.33
SNX29-204ENST00000564791 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
SNX29-204ENST00000564791 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
SNX29-204ENST00000564791 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
SNX29-204ENST00000564791 PTPN23Q9H3S7 1636 aa17.08■□□□□ 0.32
SNX29-204ENST00000564791 ITSN2Q9NZM3 1697 aa17.06■□□□□ 0.32
SNX29-204ENST00000564791 ABCC10Q5T3U5 1492 aa17.05■□□□□ 0.32
SNX29-204ENST00000564791 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
SNX29-204ENST00000564791 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.05■□□□□ 0.322e-10■■■■■ 30.8
SNX29-204ENST00000564791 CDC42BPAQ5VT25 1732 aa17.04■□□□□ 0.32
SNX29-204ENST00000564791 TCOF1Q13428 1488 aaKnown RBP17.04■□□□□ 0.32
SNX29-204ENST00000564791 MIA2Q96PC5 1412 aa17.03■□□□□ 0.32
SNX29-204ENST00000564791 GPATCH8Q9UKJ3 1502 aaKnown RBP17.02■□□□□ 0.31
SNX29-204ENST00000564791 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
SNX29-204ENST00000564791 ITGAEP38570 1179 aa16.99■□□□□ 0.31
SNX29-204ENST00000564791 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNX29-204ENST00000564791 WDR7Q9Y4E6 1490 aa16.98■□□□□ 0.31
SNX29-204ENST00000564791 PREX2Q70Z35 1606 aa16.97■□□□□ 0.31
SNX29-204ENST00000564791 MYO5CQ9NQX4 1742 aa16.96■□□□□ 0.31
SNX29-204ENST00000564791 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.31
SNX29-204ENST00000564791 ASXL2Q76L83 1435 aa16.95■□□□□ 0.3
SNX29-204ENST00000564791 CAMSAP2Q08AD1 1489 aa16.95■□□□□ 0.3
SNX29-204ENST00000564791 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
SNX29-204ENST00000564791 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
SNX29-204ENST00000564791 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNX29-204ENST00000564791 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
SNX29-204ENST00000564791 ZNF644Q9H582 1327 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms