RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 CENPBP07199 599 aaPredicted RBP32.95■■■□□ 2.87
SPSB3-206ENST00000564709 LRRC9Q6ZRR7 1453 aa32.94■■■□□ 2.86
SPSB3-206ENST00000564709 URB2Q14146 1524 aaKnown RBP32.91■■■□□ 2.86
SPSB3-206ENST00000564709 FHAD1B1AJZ9 1412 aa32.91■■■□□ 2.86
SPSB3-206ENST00000564709 CUL7Q14999 1698 aa32.91■■■□□ 2.86
SPSB3-206ENST00000564709 LAMC3Q9Y6N6 1575 aa32.9■■■□□ 2.86
SPSB3-206ENST00000564709 FHOD3Q2V2M9 1422 aa32.9■■■□□ 2.86
SPSB3-206ENST00000564709 CFAP43Q8NDM7 1665 aa32.9■■■□□ 2.86
SPSB3-206ENST00000564709 MIER1Q8N108 512 aa32.88■■■□□ 2.85
SPSB3-206ENST00000564709 ATP1B4Q9UN42 357 aaPredicted RBP32.88■■■□□ 2.85
SPSB3-206ENST00000564709 WDR97A6NE52 1622 aa32.86■■■□□ 2.85
SPSB3-206ENST00000564709 CTTNBP2Q8WZ74 1663 aa32.86■■■□□ 2.85
SPSB3-206ENST00000564709 PHLDB1Q86UU1 1377 aa32.84■■■□□ 2.85
SPSB3-206ENST00000564709 YTHDC1Q96MU7 727 aaKnown RBP32.82■■■□□ 2.84
SPSB3-206ENST00000564709 DNAJC5BQ9UF47 199 aa32.8■■■□□ 2.84
SPSB3-206ENST00000564709 EFCAB5A4FU69 1503 aa32.79■■■□□ 2.84
SPSB3-206ENST00000564709 RAB3GAP2Q9H2M9 1393 aa32.78■■■□□ 2.84
SPSB3-206ENST00000564709 GTF3C3Q9Y5Q9 886 aa32.76■■■□□ 2.83
SPSB3-206ENST00000564709 TDRD9Q8NDG6 1382 aaKnown RBP32.75■■■□□ 2.83
SPSB3-206ENST00000564709 FYCO1Q9BQS8 1478 aa32.73■■■□□ 2.83
SPSB3-206ENST00000564709 FAM50AQ14320 339 aaKnown RBP32.72■■■□□ 2.83
SPSB3-206ENST00000564709 ABCA5Q8WWZ7 1642 aa32.72■■■□□ 2.83
SPSB3-206ENST00000564709 KIF21AQ7Z4S6 1674 aa32.71■■■□□ 2.83
SPSB3-206ENST00000564709 CASKIN1Q8WXD9 1431 aa32.68■■■□□ 2.82
SPSB3-206ENST00000564709 PDS5BQ9NTI5 1447 aa32.66■■■□□ 2.82
SPSB3-206ENST00000564709 GAPVD1Q14C86 1478 aa32.65■■■□□ 2.82
SPSB3-206ENST00000564709 MAPKBP1O60336 1514 aa32.64■■■□□ 2.82
SPSB3-206ENST00000564709 SETD5Q9C0A6 1442 aa32.64■■■□□ 2.82
SPSB3-206ENST00000564709 AQRO60306 1485 aaKnown RBP eCLIP32.62■■■□□ 2.812e-8■■■■■ 44.6
SPSB3-206ENST00000564709 FMN1Q68DA7 1419 aa32.57■■■□□ 2.8
SPSB3-206ENST00000564709 SNAPC4Q5SXM2 1469 aa32.57■■■□□ 2.8
SPSB3-206ENST00000564709 SAMD9Q5K651 1589 aa32.54■■■□□ 2.8
SPSB3-206ENST00000564709 LRRIQ1Q96JM4 1722 aa32.51■■■□□ 2.79
SPSB3-206ENST00000564709 TARBP1Q13395 1621 aaKnown RBP32.49■■■□□ 2.79
SPSB3-206ENST00000564709 MTUS2Q5JR59 1369 aa32.42■■■□□ 2.78
SPSB3-206ENST00000564709 FGD6Q6ZV73 1430 aa32.4■■■□□ 2.78
SPSB3-206ENST00000564709 SIN3AQ96ST3 1273 aa32.39■■■□□ 2.78
SPSB3-206ENST00000564709 PBRM1Q86U86 1689 aa32.38■■■□□ 2.77
SPSB3-206ENST00000564709 GRIN2BQ13224 1484 aa32.37■■■□□ 2.77
SPSB3-206ENST00000564709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.35■■■□□ 2.771e-6■■■■□ 25.8
SPSB3-206ENST00000564709 NCOA2Q15596 1464 aa32.29■■■□□ 2.76
SPSB3-206ENST00000564709 THOC2Q8NI27 1593 aaKnown RBP32.27■■■□□ 2.76
SPSB3-206ENST00000564709 SUPT6HQ7KZ85 1726 aaKnown RBP32.25■■■□□ 2.75
SPSB3-206ENST00000564709 PELP1Q8IZL8 1130 aaKnown RBP32.25■■■□□ 2.75
SPSB3-206ENST00000564709 PTPRKQ15262 1439 aa32.24■■■□□ 2.75
SPSB3-206ENST00000564709 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
SPSB3-206ENST00000564709 EHBP1L1Q8N3D4 1523 aa32.22■■■□□ 2.75
SPSB3-206ENST00000564709 MRC2Q9UBG0 1479 aa32.22■■■□□ 2.75
SPSB3-206ENST00000564709 MYOM3Q5VTT5 1437 aa32.21■■■□□ 2.75
SPSB3-206ENST00000564709 MAGI3Q5TCQ9 1506 aa32.2■■■□□ 2.75
SPSB3-206ENST00000564709 CCDC18Q5T9S5 1454 aa32.2■■■□□ 2.74
SPSB3-206ENST00000564709 IQGAP2Q13576 1575 aa32.19■■■□□ 2.74
SPSB3-206ENST00000564709 PTPN23Q9H3S7 1636 aa32.16■■■□□ 2.74
SPSB3-206ENST00000564709 UGGT2Q9NYU1 1516 aa32.14■■■□□ 2.73
SPSB3-206ENST00000564709 HFM1A2PYH4 1435 aa32.13■■■□□ 2.73
SPSB3-206ENST00000564709 HECW1Q76N89 1606 aa32.12■■■□□ 2.73
SPSB3-206ENST00000564709 ZNF608Q9ULD9 1512 aaPredicted RBP32.08■■■□□ 2.73
SPSB3-206ENST00000564709 ARHGEF11O15085 1522 aa32.08■■■□□ 2.73
SPSB3-206ENST00000564709 NAIPQ13075 1403 aa32.06■■■□□ 2.72
SPSB3-206ENST00000564709 ARID3CA6NKF2 412 aa32.05■■■□□ 2.72
SPSB3-206ENST00000564709 CDK13Q14004 1512 aaKnown RBP32.05■■■□□ 2.72
SPSB3-206ENST00000564709 UACAQ9BZF9 1416 aa32.04■■■□□ 2.72
SPSB3-206ENST00000564709 EPRSP07814 1512 aaKnown RBP32.03■■■□□ 2.72
SPSB3-206ENST00000564709 TIMELESSQ9UNS1 1208 aa32.03■■■□□ 2.72
SPSB3-206ENST00000564709 PPP1R15AO75807 674 aaPredicted RBP32■■■□□ 2.71
SPSB3-206ENST00000564709 WDR62O43379 1518 aa31.99■■■□□ 2.71
SPSB3-206ENST00000564709 HIRIP3Q9BW71 556 aaPredicted RBP31.99■■■□□ 2.71
SPSB3-206ENST00000564709 IFT140Q96RY7 1462 aa31.98■■■□□ 2.71
SPSB3-206ENST00000564709 DDX10Q13206 875 aaKnown RBP31.97■■■□□ 2.71
SPSB3-206ENST00000564709 KCNH8Q96L42 1107 aa31.95■■■□□ 2.71
SPSB3-206ENST00000564709 TONSLQ96HA7 1378 aa31.95■■■□□ 2.71
SPSB3-206ENST00000564709 CHIC2Q9UKJ5 165 aa31.95■■■□□ 2.71
SPSB3-206ENST00000564709 RRP7BPQ9NSQ0 103 aa31.93■■■□□ 2.7
SPSB3-206ENST00000564709 TCOF1Q13428 1488 aaKnown RBP31.93■■■□□ 2.7
SPSB3-206ENST00000564709 GCC2Q8IWJ2 1684 aa31.88■■■□□ 2.69
SPSB3-206ENST00000564709 EIF4G3O43432 1585 aaKnown RBP31.87■■■□□ 2.69
SPSB3-206ENST00000564709 KIAA0556O60303 1618 aa31.86■■■□□ 2.69
SPSB3-206ENST00000564709 DISP1Q96F81 1524 aa31.84■■■□□ 2.69
SPSB3-206ENST00000564709 KDM6BO15054 1643 aa31.84■■■□□ 2.69
SPSB3-206ENST00000564709 KIAA0586Q9BVV6 1533 aa31.82■■■□□ 2.68
SPSB3-206ENST00000564709 GRIN2AQ12879 1464 aa31.8■■■□□ 2.68
SPSB3-206ENST00000564709 MIA2Q96PC5 1412 aa31.78■■■□□ 2.68
SPSB3-206ENST00000564709 TRIM52Q96A61 297 aa31.75■■■□□ 2.67
SPSB3-206ENST00000564709 DENND4BO75064 1496 aaPredicted RBP31.74■■■□□ 2.67
SPSB3-206ENST00000564709 ERCC6Q03468 1493 aa31.74■■■□□ 2.67
SPSB3-206ENST00000564709 KDM5BQ9UGL1 1544 aa31.74■■■□□ 2.67
SPSB3-206ENST00000564709 NUP153P49790 1475 aaKnown RBP31.74■■■□□ 2.67
SPSB3-206ENST00000564709 RAPGEF6Q8TEU7 1601 aa31.73■■■□□ 2.67
SPSB3-206ENST00000564709 AKNAQ7Z591 1439 aa31.71■■■□□ 2.67
SPSB3-206ENST00000564709 SUPT16HQ9Y5B9 1047 aaKnown RBP31.64■■■□□ 2.66
SPSB3-206ENST00000564709 CEP170Q5SW79 1584 aa31.63■■■□□ 2.65
SPSB3-206ENST00000564709 ZNF644Q9H582 1327 aaPredicted RBP31.63■■■□□ 2.65
SPSB3-206ENST00000564709 DAPK1P53355 1430 aa31.63■■■□□ 2.65
SPSB3-206ENST00000564709 MAGI1Q96QZ7 1491 aaPredicted RBP31.6■■■□□ 2.65
SPSB3-206ENST00000564709 DNMT1P26358 1616 aaKnown RBP31.59■■■□□ 2.65
SPSB3-206ENST00000564709 FOXD1Q16676 465 aa31.59■■■□□ 2.65
SPSB3-206ENST00000564709 CHMP7Q8WUX9 453 aaPredicted RBP31.59■■■□□ 2.65
SPSB3-206ENST00000564709 MPHOSPH9Q99550 1183 aa31.59■■■□□ 2.65
SPSB3-206ENST00000564709 FBLN2P98095 1184 aa31.59■■■□□ 2.65
SPSB3-206ENST00000564709 ANP32CO43423 234 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms