RNA–Protein interactions for RNA: ENST00000564701.1

ACSM3-209, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 3

Gene ACSM3, Length 756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-209ENST00000564701 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
ACSM3-209ENST00000564701 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
ACSM3-209ENST00000564701 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
ACSM3-209ENST00000564701 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
ACSM3-209ENST00000564701 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
ACSM3-209ENST00000564701 CYB5RLQ6IPT4 315 aa14.12□□□□□ -0.15
ACSM3-209ENST00000564701 CEP162Q5TB80 1403 aa14.12□□□□□ -0.15
ACSM3-209ENST00000564701 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
ACSM3-209ENST00000564701 CHD1O14646 1710 aa14.1□□□□□ -0.15
ACSM3-209ENST00000564701 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
ACSM3-209ENST00000564701 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
ACSM3-209ENST00000564701 CLIP1P30622 1438 aa14.07□□□□□ -0.16
ACSM3-209ENST00000564701 CTTNBP2Q8WZ74 1663 aa14.05□□□□□ -0.16
ACSM3-209ENST00000564701 GRIN2AQ12879 1464 aa14.05□□□□□ -0.16
ACSM3-209ENST00000564701 ARAP1Q96P48 1450 aa14.02□□□□□ -0.16
ACSM3-209ENST00000564701 EFCAB5A4FU69 1503 aa13.99□□□□□ -0.17
ACSM3-209ENST00000564701 KIAA0586Q9BVV6 1533 aa13.98□□□□□ -0.17
ACSM3-209ENST00000564701 CLASP1Q7Z460 1538 aa13.97□□□□□ -0.17
ACSM3-209ENST00000564701 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
ACSM3-209ENST00000564701 NUP160Q12769 1436 aa13.96□□□□□ -0.18
ACSM3-209ENST00000564701 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
ACSM3-209ENST00000564701 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
ACSM3-209ENST00000564701 RANGAP1P46060 587 aaPredicted RBP13.93□□□□□ -0.18
ACSM3-209ENST00000564701 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
ACSM3-209ENST00000564701 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
ACSM3-209ENST00000564701 UGGT2Q9NYU1 1516 aa13.91□□□□□ -0.18
ACSM3-209ENST00000564701 SAMD9Q5K651 1589 aa13.9□□□□□ -0.18
ACSM3-209ENST00000564701 FMN1Q68DA7 1419 aa13.86□□□□□ -0.19
ACSM3-209ENST00000564701 CARMIL2Q6F5E8 1435 aa13.85□□□□□ -0.19
ACSM3-209ENST00000564701 APLP2Q06481 763 aa13.84□□□□□ -0.19
ACSM3-209ENST00000564701 JPH4Q96JJ6 628 aa13.84□□□□□ -0.19
ACSM3-209ENST00000564701 FHOD3Q2V2M9 1422 aa13.82□□□□□ -0.2
ACSM3-209ENST00000564701 MSH5O43196 834 aa13.82□□□□□ -0.2
ACSM3-209ENST00000564701 ERCC6L2Q5T890 1561 aa13.82□□□□□ -0.2
ACSM3-209ENST00000564701 KIAA0556O60303 1618 aa13.81□□□□□ -0.2
ACSM3-209ENST00000564701 DISP1Q96F81 1524 aa13.8□□□□□ -0.2
ACSM3-209ENST00000564701 P3H3Q8IVL6 736 aa13.8□□□□□ -0.2
ACSM3-209ENST00000564701 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
ACSM3-209ENST00000564701 FYCO1Q9BQS8 1478 aa13.79□□□□□ -0.2
ACSM3-209ENST00000564701 SHROOM2Q13796 1616 aa13.78□□□□□ -0.2
ACSM3-209ENST00000564701 MAP3K1Q13233 1512 aa13.76□□□□□ -0.21
ACSM3-209ENST00000564701 PRG4Q92954 1404 aaPredicted RBP13.75□□□□□ -0.21
ACSM3-209ENST00000564701 PCF11O94913 1555 aaKnown RBP13.74□□□□□ -0.21
ACSM3-209ENST00000564701 HECW1Q76N89 1606 aa13.71□□□□□ -0.22
ACSM3-209ENST00000564701 CCDC18Q5T9S5 1454 aa13.7□□□□□ -0.22
ACSM3-209ENST00000564701 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
ACSM3-209ENST00000564701 PTPRGP23470 1445 aa13.68□□□□□ -0.22
ACSM3-209ENST00000564701 ATP1B4Q9UN42 357 aaPredicted RBP13.68□□□□□ -0.22
ACSM3-209ENST00000564701 CFAP43Q8NDM7 1665 aa13.67□□□□□ -0.22
ACSM3-209ENST00000564701 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
ACSM3-209ENST00000564701 TRIM26Q12899 539 aaPredicted RBP13.66□□□□□ -0.22
ACSM3-209ENST00000564701 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
ACSM3-209ENST00000564701 ABCA8O94911 1581 aa13.62□□□□□ -0.23
ACSM3-209ENST00000564701 LRRC9Q6ZRR7 1453 aa13.62□□□□□ -0.23
ACSM3-209ENST00000564701 TTBK1Q5TCY1 1321 aaPredicted RBP13.62□□□□□ -0.23
ACSM3-209ENST00000564701 PPARGC1BQ86YN6 1023 aaKnown RBP13.61□□□□□ -0.23
ACSM3-209ENST00000564701 CDK11AQ9UQ88 783 aaPredicted RBP13.61□□□□□ -0.23
ACSM3-209ENST00000564701 UACAQ9BZF9 1416 aa13.61□□□□□ -0.23
ACSM3-209ENST00000564701 NUP153P49790 1475 aaKnown RBP13.61□□□□□ -0.23
ACSM3-209ENST00000564701 PLB1Q6P1J6 1458 aa13.6□□□□□ -0.23
ACSM3-209ENST00000564701 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
ACSM3-209ENST00000564701 KANK4Q5T7N3 995 aaPredicted RBP13.59□□□□□ -0.23
ACSM3-209ENST00000564701 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
ACSM3-209ENST00000564701 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
ACSM3-209ENST00000564701 EHBP1L1Q8N3D4 1523 aa13.58□□□□□ -0.24
ACSM3-209ENST00000564701 UHRF1BP1LA0JNW5 1464 aa13.56□□□□□ -0.24
ACSM3-209ENST00000564701 ABCC2Q92887 1545 aa13.56□□□□□ -0.24
ACSM3-209ENST00000564701 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
ACSM3-209ENST00000564701 FAM69CQ0P6D2 419 aa13.54□□□□□ -0.24
ACSM3-209ENST00000564701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.53□□□□□ -0.24
ACSM3-209ENST00000564701 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
ACSM3-209ENST00000564701 PCGF6Q9BYE7 350 aa13.53□□□□□ -0.24
ACSM3-209ENST00000564701 SUPT6HQ7KZ85 1726 aaKnown RBP13.53□□□□□ -0.24
ACSM3-209ENST00000564701 ADCY10Q96PN6 1610 aa13.51□□□□□ -0.25
ACSM3-209ENST00000564701 ATP10BO94823 1461 aa13.51□□□□□ -0.25
ACSM3-209ENST00000564701 TROQ12816 1431 aaPredicted RBP13.5□□□□□ -0.25
ACSM3-209ENST00000564701 PLEKHD1A6NEE1 506 aa13.5□□□□□ -0.25
ACSM3-209ENST00000564701 ABCC10Q5T3U5 1492 aa13.48□□□□□ -0.25
ACSM3-209ENST00000564701 RRBP1Q9P2E9 1410 aaKnown RBP13.48□□□□□ -0.25
ACSM3-209ENST00000564701 ARID3CA6NKF2 412 aa13.48□□□□□ -0.25
ACSM3-209ENST00000564701 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
ACSM3-209ENST00000564701 KDM5BQ9UGL1 1544 aa13.48□□□□□ -0.25
ACSM3-209ENST00000564701 NCOA2Q15596 1464 aa13.48□□□□□ -0.25
ACSM3-209ENST00000564701 MAGI3Q5TCQ9 1506 aa13.47□□□□□ -0.25
ACSM3-209ENST00000564701 MAPKBP1O60336 1514 aa13.46□□□□□ -0.25
ACSM3-209ENST00000564701 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.26
ACSM3-209ENST00000564701 CCNB3Q8WWL7 1395 aa13.45□□□□□ -0.26
ACSM3-209ENST00000564701 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
ACSM3-209ENST00000564701 MYOM3Q5VTT5 1437 aa13.44□□□□□ -0.26
ACSM3-209ENST00000564701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.44□□□□□ -0.26
ACSM3-209ENST00000564701 KIF14Q15058 1648 aa13.43□□□□□ -0.26
ACSM3-209ENST00000564701 ZCCHC11Q5TAX3 1644 aaKnown RBP13.43□□□□□ -0.26
ACSM3-209ENST00000564701 DIP2BQ9P265 1576 aa13.42□□□□□ -0.26
ACSM3-209ENST00000564701 MIA2Q96PC5 1412 aa13.42□□□□□ -0.26
ACSM3-209ENST00000564701 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
ACSM3-209ENST00000564701 ITSN2Q9NZM3 1697 aa13.39□□□□□ -0.27
ACSM3-209ENST00000564701 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
ACSM3-209ENST00000564701 WDR7Q9Y4E6 1490 aa13.36□□□□□ -0.27
ACSM3-209ENST00000564701 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
ACSM3-209ENST00000564701 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms