RNA–Protein interactions for RNA: ENST00000564440.5

PKM-212, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 3,016 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-212ENST00000564440 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
PKM-212ENST00000564440 UBTFP17480 764 aaKnown RBP14.67□□□□□ -0.06
PKM-212ENST00000564440 RAPGEF2Q9Y4G8 1499 aa14.65□□□□□ -0.06
PKM-212ENST00000564440 KIAA0586Q9BVV6 1533 aa14.63□□□□□ -0.07
PKM-212ENST00000564440 UGGT2Q9NYU1 1516 aa14.63□□□□□ -0.07
PKM-212ENST00000564440 IQGAP2Q13576 1575 aa14.59□□□□□ -0.07
PKM-212ENST00000564440 CARMIL1Q5VZK9 1371 aa14.58□□□□□ -0.08
PKM-212ENST00000564440 RIMBP3CA6NJZ7 1639 aa14.58□□□□□ -0.08
PKM-212ENST00000564440 RIMBP3BA6NNM3 1639 aa14.58□□□□□ -0.08
PKM-212ENST00000564440 RIMBP3Q9UFD9 1639 aa14.58□□□□□ -0.08
PKM-212ENST00000564440 SAMD9Q5K651 1589 aa14.58□□□□□ -0.08
PKM-212ENST00000564440 DNAJC5Q9H3Z4 198 aa14.55□□□□□ -0.08
PKM-212ENST00000564440 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
PKM-212ENST00000564440 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
PKM-212ENST00000564440 ARHGEF11O15085 1522 aa14.53□□□□□ -0.08
PKM-212ENST00000564440 EFCAB5A4FU69 1503 aa14.5□□□□□ -0.09
PKM-212ENST00000564440 KIAA0556O60303 1618 aa14.49□□□□□ -0.09
PKM-212ENST00000564440 DISP1Q96F81 1524 aa14.46□□□□□ -0.09
PKM-212ENST00000564440 GOLGA3Q08378 1498 aa14.45□□□□□ -0.1
PKM-212ENST00000564440 UHRF1BP1LA0JNW5 1464 aa14.45□□□□□ -0.1
PKM-212ENST00000564440 CHMP7Q8WUX9 453 aaPredicted RBP14.43□□□□□ -0.1
PKM-212ENST00000564440 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
PKM-212ENST00000564440 TRIM26Q12899 539 aaPredicted RBP14.42□□□□□ -0.1
PKM-212ENST00000564440 P3H3Q8IVL6 736 aa14.41□□□□□ -0.1
PKM-212ENST00000564440 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
PKM-212ENST00000564440 ABCA8O94911 1581 aa14.37□□□□□ -0.11
PKM-212ENST00000564440 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
PKM-212ENST00000564440 MAPKBP1O60336 1514 aa14.34□□□□□ -0.11
PKM-212ENST00000564440 PRG4Q92954 1404 aaPredicted RBP14.33□□□□□ -0.12
PKM-212ENST00000564440 ADCY10Q96PN6 1610 aa14.33□□□□□ -0.12
PKM-212ENST00000564440 CARMIL2Q6F5E8 1435 aa14.33□□□□□ -0.12
PKM-212ENST00000564440 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
PKM-212ENST00000564440 TNIKQ9UKE5 1360 aa14.31□□□□□ -0.12
PKM-212ENST00000564440 ABCC2Q92887 1545 aa14.31□□□□□ -0.12
PKM-212ENST00000564440 ZEB1P37275 1124 aaPredicted RBP14.29□□□□□ -0.12
PKM-212ENST00000564440 CEP162Q5TB80 1403 aa14.28□□□□□ -0.12
PKM-212ENST00000564440 JPH4Q96JJ6 628 aa14.28□□□□□ -0.12
PKM-212ENST00000564440 KDM5BQ9UGL1 1544 aa14.28□□□□□ -0.12
PKM-212ENST00000564440 ARID3CA6NKF2 412 aa14.27□□□□□ -0.12
PKM-212ENST00000564440 RAPGEF6Q8TEU7 1601 aa14.26□□□□□ -0.13
PKM-212ENST00000564440 GLI2P10070 1586 aa14.26□□□□□ -0.13
PKM-212ENST00000564440 FBLN2P98095 1184 aa14.24□□□□□ -0.13
PKM-212ENST00000564440 ARHGAP35Q9NRY4 1499 aa14.23□□□□□ -0.13
PKM-212ENST00000564440 ZCCHC11Q5TAX3 1644 aaKnown RBP14.22□□□□□ -0.13
PKM-212ENST00000564440 LRRIQ1Q96JM4 1722 aa14.2□□□□□ -0.14
PKM-212ENST00000564440 KIF13AQ9H1H9 1805 aa14.2□□□□□ -0.14
PKM-212ENST00000564440 UACAQ9BZF9 1416 aa14.19□□□□□ -0.14
PKM-212ENST00000564440 HECW1Q76N89 1606 aa14.19□□□□□ -0.14
PKM-212ENST00000564440 MAP3K1Q13233 1512 aa14.17□□□□□ -0.14
PKM-212ENST00000564440 PTPRGP23470 1445 aa14.15□□□□□ -0.14
PKM-212ENST00000564440 FMN1Q68DA7 1419 aa14.15□□□□□ -0.14
PKM-212ENST00000564440 CFAP43Q8NDM7 1665 aa14.15□□□□□ -0.14
PKM-212ENST00000564440 FYCO1Q9BQS8 1478 aa14.15□□□□□ -0.14
PKM-212ENST00000564440 MAP3K4Q9Y6R4 1608 aa14.14□□□□□ -0.15
PKM-212ENST00000564440 DIP2BQ9P265 1576 aa14.14□□□□□ -0.15
PKM-212ENST00000564440 CLIP1P30622 1438 aa14.13□□□□□ -0.15
PKM-212ENST00000564440 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
PKM-212ENST00000564440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
PKM-212ENST00000564440 CASKIN1Q8WXD9 1431 aa14.12□□□□□ -0.15
PKM-212ENST00000564440 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
PKM-212ENST00000564440 ITGAEP38570 1179 aa14.12□□□□□ -0.15
PKM-212ENST00000564440 NUP153P49790 1475 aaKnown RBP14.11□□□□□ -0.15
PKM-212ENST00000564440 ARAP3Q8WWN8 1544 aa14.11□□□□□ -0.15
PKM-212ENST00000564440 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
PKM-212ENST00000564440 ABCA9Q8IUA7 1624 aa14.1□□□□□ -0.15
PKM-212ENST00000564440 PLB1Q6P1J6 1458 aa14.1□□□□□ -0.15
PKM-212ENST00000564440 PPRC1Q5VV67 1664 aaKnown RBP14.09□□□□□ -0.15
PKM-212ENST00000564440 PCF11O94913 1555 aaKnown RBP14.09□□□□□ -0.15
PKM-212ENST00000564440 ABCC10Q5T3U5 1492 aa14.08□□□□□ -0.16
PKM-212ENST00000564440 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.16
PKM-212ENST00000564440 APLP2Q06481 763 aa14.05□□□□□ -0.16
PKM-212ENST00000564440 ATP10BO94823 1461 aa14.05□□□□□ -0.16
PKM-212ENST00000564440 WDR7Q9Y4E6 1490 aa14.03□□□□□ -0.16
PKM-212ENST00000564440 FHOD3Q2V2M9 1422 aa14.03□□□□□ -0.16
PKM-212ENST00000564440 EPRSP07814 1512 aaKnown RBP14.02□□□□□ -0.16
PKM-212ENST00000564440 CFAP74Q9C0B2 1584 aa14.01□□□□□ -0.17
PKM-212ENST00000564440 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
PKM-212ENST00000564440 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
PKM-212ENST00000564440 ASXL2Q76L83 1435 aa13.97□□□□□ -0.17
PKM-212ENST00000564440 TIAM1Q13009 1591 aa13.96□□□□□ -0.17
PKM-212ENST00000564440 EHBP1L1Q8N3D4 1523 aa13.95□□□□□ -0.18
PKM-212ENST00000564440 MYO5CQ9NQX4 1742 aa13.94□□□□□ -0.18
PKM-212ENST00000564440 PREX2Q70Z35 1606 aa13.94□□□□□ -0.18
PKM-212ENST00000564440 KIF14Q15058 1648 aa13.94□□□□□ -0.18
PKM-212ENST00000564440 PHLDB1Q86UU1 1377 aa13.93□□□□□ -0.18
PKM-212ENST00000564440 ITSN2Q9NZM3 1697 aa13.91□□□□□ -0.18
PKM-212ENST00000564440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.91□□□□□ -0.18
PKM-212ENST00000564440 TROQ12816 1431 aaPredicted RBP13.91□□□□□ -0.18
PKM-212ENST00000564440 CDC42BPAQ5VT25 1732 aa13.91□□□□□ -0.18
PKM-212ENST00000564440 CYB5RLQ6IPT4 315 aa13.89□□□□□ -0.19
PKM-212ENST00000564440 CCER1Q8TC90 406 aaPredicted RBP13.89□□□□□ -0.19
PKM-212ENST00000564440 NEO1Q92859 1461 aa13.89□□□□□ -0.19
PKM-212ENST00000564440 CDC42BPBQ9Y5S2 1711 aa13.89□□□□□ -0.19
PKM-212ENST00000564440 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
PKM-212ENST00000564440 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
PKM-212ENST00000564440 TEX14Q8IWB6 1497 aa13.88□□□□□ -0.19
PKM-212ENST00000564440 CDK13Q14004 1512 aaKnown RBP13.88□□□□□ -0.19
PKM-212ENST00000564440 ACIN1Q9UKV3 1341 aaKnown RBP13.87□□□□□ -0.19
PKM-212ENST00000564440 ZMYM4Q5VZL5 1548 aa13.86□□□□□ -0.19
PKM-212ENST00000564440 RICTORQ6R327 1708 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms