RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
TCF4-222ENST00000564228 GTF3C3Q9Y5Q9 886 aa16.86■□□□□ 0.29
TCF4-222ENST00000564228 CARMIL1Q5VZK9 1371 aa16.85■□□□□ 0.29
TCF4-222ENST00000564228 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
TCF4-222ENST00000564228 TNIKQ9UKE5 1360 aa16.79■□□□□ 0.28
TCF4-222ENST00000564228 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
TCF4-222ENST00000564228 SNAPC4Q5SXM2 1469 aa16.76■□□□□ 0.27
TCF4-222ENST00000564228 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
TCF4-222ENST00000564228 CEP162Q5TB80 1403 aa16.72■□□□□ 0.27
TCF4-222ENST00000564228 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
TCF4-222ENST00000564228 CTTNBP2Q8WZ74 1663 aa16.71■□□□□ 0.27
TCF4-222ENST00000564228 MAGI1Q96QZ7 1491 aaPredicted RBP16.71■□□□□ 0.26
TCF4-222ENST00000564228 DIEXFQ68CQ4 756 aaKnown RBP16.7■□□□□ 0.26
TCF4-222ENST00000564228 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
TCF4-222ENST00000564228 FBLN2P98095 1184 aa16.65■□□□□ 0.26
TCF4-222ENST00000564228 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
TCF4-222ENST00000564228 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.25
TCF4-222ENST00000564228 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
TCF4-222ENST00000564228 CLIP1P30622 1438 aa16.63■□□□□ 0.25
TCF4-222ENST00000564228 CHD1O14646 1710 aa16.62■□□□□ 0.25
TCF4-222ENST00000564228 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
TCF4-222ENST00000564228 CEP170Q5SW79 1584 aa16.56■□□□□ 0.24
TCF4-222ENST00000564228 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
TCF4-222ENST00000564228 ARHGAP35Q9NRY4 1499 aa16.52■□□□□ 0.24
TCF4-222ENST00000564228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.51■□□□□ 0.23
TCF4-222ENST00000564228 KIAA0586Q9BVV6 1533 aa16.5■□□□□ 0.23
TCF4-222ENST00000564228 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
TCF4-222ENST00000564228 NUP160Q12769 1436 aa16.49■□□□□ 0.23
TCF4-222ENST00000564228 P3H3Q8IVL6 736 aa16.49■□□□□ 0.23
TCF4-222ENST00000564228 EFCAB5A4FU69 1503 aa16.47■□□□□ 0.23
TCF4-222ENST00000564228 SAMD9Q5K651 1589 aa16.46■□□□□ 0.22
TCF4-222ENST00000564228 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
TCF4-222ENST00000564228 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
TCF4-222ENST00000564228 UGGT2Q9NYU1 1516 aa16.42■□□□□ 0.22
TCF4-222ENST00000564228 ZNF316A6NFI3 1004 aaPredicted RBP16.41■□□□□ 0.22
TCF4-222ENST00000564228 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
TCF4-222ENST00000564228 KIAA0556O60303 1618 aa16.38■□□□□ 0.21
TCF4-222ENST00000564228 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
TCF4-222ENST00000564228 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
TCF4-222ENST00000564228 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
TCF4-222ENST00000564228 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
TCF4-222ENST00000564228 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
TCF4-222ENST00000564228 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
TCF4-222ENST00000564228 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
TCF4-222ENST00000564228 KCNA4P22459 653 aa16.31■□□□□ 0.2
TCF4-222ENST00000564228 APLP2Q06481 763 aa16.31■□□□□ 0.2
TCF4-222ENST00000564228 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
TCF4-222ENST00000564228 PRG4Q92954 1404 aaPredicted RBP16.3■□□□□ 0.2
TCF4-222ENST00000564228 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
TCF4-222ENST00000564228 FYCO1Q9BQS8 1478 aa16.27■□□□□ 0.19
TCF4-222ENST00000564228 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
TCF4-222ENST00000564228 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
TCF4-222ENST00000564228 LRRIQ1Q96JM4 1722 aa16.25■□□□□ 0.19
TCF4-222ENST00000564228 YTHDC1Q96MU7 727 aaKnown RBP16.23■□□□□ 0.19
TCF4-222ENST00000564228 ANP32EQ9BTT0 268 aa16.22■□□□□ 0.19
TCF4-222ENST00000564228 TIAM1Q13009 1591 aa16.21■□□□□ 0.19
TCF4-222ENST00000564228 HECW1Q76N89 1606 aa16.21■□□□□ 0.19
TCF4-222ENST00000564228 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.19
TCF4-222ENST00000564228 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
TCF4-222ENST00000564228 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
TCF4-222ENST00000564228 MIER1Q8N108 512 aa16.19■□□□□ 0.18
TCF4-222ENST00000564228 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
TCF4-222ENST00000564228 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
TCF4-222ENST00000564228 PTPRGP23470 1445 aa16.17■□□□□ 0.18
TCF4-222ENST00000564228 ARID3CA6NKF2 412 aa16.17■□□□□ 0.18
TCF4-222ENST00000564228 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
TCF4-222ENST00000564228 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
TCF4-222ENST00000564228 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.17
TCF4-222ENST00000564228 ABCA8O94911 1581 aa16.13■□□□□ 0.17
TCF4-222ENST00000564228 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
TCF4-222ENST00000564228 NUP153P49790 1475 aaKnown RBP16.13■□□□□ 0.17
TCF4-222ENST00000564228 CCDC18Q5T9S5 1454 aa16.13■□□□□ 0.17
TCF4-222ENST00000564228 LRRC9Q6ZRR7 1453 aa16.12■□□□□ 0.17
TCF4-222ENST00000564228 SUPT16HQ9Y5B9 1047 aaKnown RBP16.1■□□□□ 0.17
TCF4-222ENST00000564228 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
TCF4-222ENST00000564228 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
TCF4-222ENST00000564228 UACAQ9BZF9 1416 aa16.07■□□□□ 0.16
TCF4-222ENST00000564228 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
TCF4-222ENST00000564228 MAGI3Q5TCQ9 1506 aa16.05■□□□□ 0.16
TCF4-222ENST00000564228 EHBP1L1Q8N3D4 1523 aa16.04■□□□□ 0.16
TCF4-222ENST00000564228 ABCC2Q92887 1545 aa16.04■□□□□ 0.16
TCF4-222ENST00000564228 ARHGEF11O15085 1522 aa16.03■□□□□ 0.16
TCF4-222ENST00000564228 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.16
TCF4-222ENST00000564228 ATP10BO94823 1461 aa16.01■□□□□ 0.15
TCF4-222ENST00000564228 ADCY10Q96PN6 1610 aa16■□□□□ 0.15
TCF4-222ENST00000564228 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
TCF4-222ENST00000564228 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
TCF4-222ENST00000564228 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
TCF4-222ENST00000564228 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
TCF4-222ENST00000564228 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
TCF4-222ENST00000564228 UHRF1BP1LA0JNW5 1464 aa15.98■□□□□ 0.15
TCF4-222ENST00000564228 ADRA2BP18089 450 aa15.98■□□□□ 0.15
TCF4-222ENST00000564228 ZCCHC11Q5TAX3 1644 aaKnown RBP15.98■□□□□ 0.15
TCF4-222ENST00000564228 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.15
TCF4-222ENST00000564228 NCOA2Q15596 1464 aa15.96■□□□□ 0.15
TCF4-222ENST00000564228 PLEKHD1A6NEE1 506 aa15.94■□□□□ 0.14
TCF4-222ENST00000564228 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
TCF4-222ENST00000564228 KIF14Q15058 1648 aa15.93■□□□□ 0.14
TCF4-222ENST00000564228 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
TCF4-222ENST00000564228 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms