RNA–Protein interactions for RNA: ENST00000564201.1

NR4A1-220, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-220ENST00000564201 KIF21BO75037 1637 aa19.56■□□□□ 0.72
NR4A1-220ENST00000564201 CEP170Q5SW79 1584 aa19.55■□□□□ 0.72
NR4A1-220ENST00000564201 NUP160Q12769 1436 aa19.52■□□□□ 0.72
NR4A1-220ENST00000564201 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
NR4A1-220ENST00000564201 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
NR4A1-220ENST00000564201 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
NR4A1-220ENST00000564201 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
NR4A1-220ENST00000564201 KIAA0586Q9BVV6 1533 aa19.45■□□□□ 0.7
NR4A1-220ENST00000564201 CTTNBP2Q8WZ74 1663 aa19.44■□□□□ 0.7
NR4A1-220ENST00000564201 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
NR4A1-220ENST00000564201 RANGAP1P46060 587 aaPredicted RBP19.41■□□□□ 0.7
NR4A1-220ENST00000564201 IQGAP2Q13576 1575 aa19.4■□□□□ 0.7
NR4A1-220ENST00000564201 JPH4Q96JJ6 628 aa19.39■□□□□ 0.69
NR4A1-220ENST00000564201 SHROOM2Q13796 1616 aa19.33■□□□□ 0.68
NR4A1-220ENST00000564201 PRG4Q92954 1404 aaPredicted RBP19.32■□□□□ 0.68
NR4A1-220ENST00000564201 TNIKQ9UKE5 1360 aa19.32■□□□□ 0.68
NR4A1-220ENST00000564201 UGGT2Q9NYU1 1516 aa19.28■□□□□ 0.68
NR4A1-220ENST00000564201 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.68
NR4A1-220ENST00000564201 P3H3Q8IVL6 736 aa19.27■□□□□ 0.68
NR4A1-220ENST00000564201 ARHGEF11O15085 1522 aa19.26■□□□□ 0.67
NR4A1-220ENST00000564201 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
NR4A1-220ENST00000564201 CARMIL2Q6F5E8 1435 aa19.25■□□□□ 0.67
NR4A1-220ENST00000564201 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
NR4A1-220ENST00000564201 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
NR4A1-220ENST00000564201 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
NR4A1-220ENST00000564201 DISP1Q96F81 1524 aa19.23■□□□□ 0.67
NR4A1-220ENST00000564201 KIAA0556O60303 1618 aa19.21■□□□□ 0.67
NR4A1-220ENST00000564201 CLIP1P30622 1438 aa19.18■□□□□ 0.66
NR4A1-220ENST00000564201 SAMD9Q5K651 1589 aa19.18■□□□□ 0.66
NR4A1-220ENST00000564201 CEP162Q5TB80 1403 aa19.17■□□□□ 0.66
NR4A1-220ENST00000564201 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
NR4A1-220ENST00000564201 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
NR4A1-220ENST00000564201 FHOD3Q2V2M9 1422 aa19.15■□□□□ 0.66
NR4A1-220ENST00000564201 CYB5RLQ6IPT4 315 aa19.14■□□□□ 0.65
NR4A1-220ENST00000564201 PTPRGP23470 1445 aa19.14■□□□□ 0.65
NR4A1-220ENST00000564201 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
NR4A1-220ENST00000564201 PPP6R1Q9UPN7 881 aa19.09■□□□□ 0.65
NR4A1-220ENST00000564201 ADRA2BP18089 450 aa19.07■□□□□ 0.64
NR4A1-220ENST00000564201 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
NR4A1-220ENST00000564201 FMN1Q68DA7 1419 aa19■□□□□ 0.63
NR4A1-220ENST00000564201 ATP1B4Q9UN42 357 aaPredicted RBP19■□□□□ 0.63
NR4A1-220ENST00000564201 UACAQ9BZF9 1416 aa19■□□□□ 0.63
NR4A1-220ENST00000564201 ARID3CA6NKF2 412 aa18.97■□□□□ 0.63
NR4A1-220ENST00000564201 ABCA8O94911 1581 aa18.96■□□□□ 0.63
NR4A1-220ENST00000564201 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
NR4A1-220ENST00000564201 ADCY10Q96PN6 1610 aa18.96■□□□□ 0.63
NR4A1-220ENST00000564201 ABCC2Q92887 1545 aa18.94■□□□□ 0.62
NR4A1-220ENST00000564201 UHRF1BP1LA0JNW5 1464 aa18.92■□□□□ 0.62
NR4A1-220ENST00000564201 PCF11O94913 1555 aaKnown RBP18.92■□□□□ 0.62
NR4A1-220ENST00000564201 NPM1P06748 294 aaKnown RBP eCLIP18.91■□□□□ 0.62
NR4A1-220ENST00000564201 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
NR4A1-220ENST00000564201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
NR4A1-220ENST00000564201 HNRNPUL2Q1KMD3 747 aaKnown RBP18.89■□□□□ 0.61
NR4A1-220ENST00000564201 CASKIN1Q8WXD9 1431 aa18.89■□□□□ 0.61
NR4A1-220ENST00000564201 NUP153P49790 1475 aaKnown RBP18.89■□□□□ 0.61
NR4A1-220ENST00000564201 HECW1Q76N89 1606 aa18.88■□□□□ 0.61
NR4A1-220ENST00000564201 FYCO1Q9BQS8 1478 aa18.86■□□□□ 0.61
NR4A1-220ENST00000564201 ZCCHC11Q5TAX3 1644 aaKnown RBP18.84■□□□□ 0.61
NR4A1-220ENST00000564201 KDM5BQ9UGL1 1544 aa18.84■□□□□ 0.61
NR4A1-220ENST00000564201 ATP10BO94823 1461 aa18.84■□□□□ 0.61
NR4A1-220ENST00000564201 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.6
NR4A1-220ENST00000564201 EPRSP07814 1512 aaKnown RBP18.82■□□□□ 0.6
NR4A1-220ENST00000564201 LRRIQ1Q96JM4 1722 aa18.81■□□□□ 0.6
NR4A1-220ENST00000564201 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.6
NR4A1-220ENST00000564201 APLP2Q06481 763 aa18.77■□□□□ 0.6
NR4A1-220ENST00000564201 ASXL2Q76L83 1435 aa18.75■□□□□ 0.59
NR4A1-220ENST00000564201 PLEKHD1A6NEE1 506 aa18.75■□□□□ 0.59
NR4A1-220ENST00000564201 PIAS4Q8N2W9 510 aaPredicted RBP18.75■□□□□ 0.59
NR4A1-220ENST00000564201 KCNH8Q96L42 1107 aa18.73■□□□□ 0.59
NR4A1-220ENST00000564201 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
NR4A1-220ENST00000564201 MAPKBP1O60336 1514 aa18.72■□□□□ 0.59
NR4A1-220ENST00000564201 WDR7Q9Y4E6 1490 aa18.71■□□□□ 0.59
NR4A1-220ENST00000564201 TIAM1Q13009 1591 aa18.69■□□□□ 0.58
NR4A1-220ENST00000564201 CFAP43Q8NDM7 1665 aa18.69■□□□□ 0.58
NR4A1-220ENST00000564201 MTUS2Q5JR59 1369 aa18.67■□□□□ 0.58
NR4A1-220ENST00000564201 MAGI3Q5TCQ9 1506 aa18.66■□□□□ 0.58
NR4A1-220ENST00000564201 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
NR4A1-220ENST00000564201 KANK4Q5T7N3 995 aaPredicted RBP18.66■□□□□ 0.58
NR4A1-220ENST00000564201 TROQ12816 1431 aaPredicted RBP18.65■□□□□ 0.58
NR4A1-220ENST00000564201 MAP3K1Q13233 1512 aa18.64■□□□□ 0.58
NR4A1-220ENST00000564201 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.57
NR4A1-220ENST00000564201 FAM69CQ0P6D2 419 aa18.63■□□□□ 0.57
NR4A1-220ENST00000564201 ABCC10Q5T3U5 1492 aa18.61■□□□□ 0.57
NR4A1-220ENST00000564201 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
NR4A1-220ENST00000564201 DIP2BQ9P265 1576 aa18.6■□□□□ 0.57
NR4A1-220ENST00000564201 EHBP1L1Q8N3D4 1523 aa18.6■□□□□ 0.57
NR4A1-220ENST00000564201 KIF14Q15058 1648 aa18.6■□□□□ 0.57
NR4A1-220ENST00000564201 KIF13AQ9H1H9 1805 aa18.58■□□□□ 0.56
NR4A1-220ENST00000564201 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.56
NR4A1-220ENST00000564201 GLI2P10070 1586 aa18.54■□□□□ 0.56
NR4A1-220ENST00000564201 SUPT6HQ7KZ85 1726 aaKnown RBP18.54■□□□□ 0.56
NR4A1-220ENST00000564201 TTC37Q6PGP7 1564 aa18.53■□□□□ 0.56
NR4A1-220ENST00000564201 ABCA9Q8IUA7 1624 aa18.52■□□□□ 0.56
NR4A1-220ENST00000564201 TSPOAP1O95153 1857 aa18.52■□□□□ 0.56
NR4A1-220ENST00000564201 NCOA2Q15596 1464 aa18.52■□□□□ 0.55
NR4A1-220ENST00000564201 CD109Q6YHK3 1445 aa18.51■□□□□ 0.55
NR4A1-220ENST00000564201 MAP3K4Q9Y6R4 1608 aa18.49■□□□□ 0.55
NR4A1-220ENST00000564201 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
NR4A1-220ENST00000564201 MYO5CQ9NQX4 1742 aa18.46■□□□□ 0.55
NR4A1-220ENST00000564201 CDC42BPAQ5VT25 1732 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms