RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
IRF8-203ENST00000563180 PRXQ9BXM0 1461 aa28.56■■■□□ 2.16
IRF8-203ENST00000563180 KIAA0586Q9BVV6 1533 aa28.53■■■□□ 2.16
IRF8-203ENST00000563180 SHROOM2Q13796 1616 aa28.52■■■□□ 2.16
IRF8-203ENST00000563180 JPH4Q96JJ6 628 aa28.5■■■□□ 2.15
IRF8-203ENST00000563180 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.14
IRF8-203ENST00000563180 ARAP1Q96P48 1450 aa28.43■■■□□ 2.14
IRF8-203ENST00000563180 PRG4Q92954 1404 aaPredicted RBP28.42■■■□□ 2.14
IRF8-203ENST00000563180 CYB5RLQ6IPT4 315 aa28.42■■■□□ 2.14
IRF8-203ENST00000563180 IQGAP2Q13576 1575 aa28.4■■■□□ 2.14
IRF8-203ENST00000563180 CTTNBP2Q8WZ74 1663 aa28.38■■■□□ 2.13
IRF8-203ENST00000563180 KIF21BO75037 1637 aa28.34■■■□□ 2.13
IRF8-203ENST00000563180 EHMT2Q96KQ7 1210 aa28.26■■■□□ 2.12
IRF8-203ENST00000563180 UGGT2Q9NYU1 1516 aa28.24■■■□□ 2.11
IRF8-203ENST00000563180 CARMIL2Q6F5E8 1435 aa28.23■■■□□ 2.11
IRF8-203ENST00000563180 GOLGA3Q08378 1498 aa28.19■■■□□ 2.1
IRF8-203ENST00000563180 DISP1Q96F81 1524 aa28.19■■■□□ 2.1
IRF8-203ENST00000563180 UBTFP17480 764 aaKnown RBP28.15■■■□□ 2.1
IRF8-203ENST00000563180 TNIKQ9UKE5 1360 aa28.13■■■□□ 2.09
IRF8-203ENST00000563180 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
IRF8-203ENST00000563180 KIAA0556O60303 1618 aa28.13■■■□□ 2.09
IRF8-203ENST00000563180 PTPRGP23470 1445 aa28.11■■■□□ 2.09
IRF8-203ENST00000563180 RANGAP1P46060 587 aaPredicted RBP28.08■■■□□ 2.09
IRF8-203ENST00000563180 P3H3Q8IVL6 736 aa28.02■■■□□ 2.08
IRF8-203ENST00000563180 SAMD9Q5K651 1589 aa28■■■□□ 2.07
IRF8-203ENST00000563180 ADCY10Q96PN6 1610 aa27.97■■■□□ 2.07
IRF8-203ENST00000563180 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
IRF8-203ENST00000563180 EFCAB5A4FU69 1503 aa27.89■■■□□ 2.06
IRF8-203ENST00000563180 NPM1P06748 294 aaKnown RBP eCLIP27.89■■■□□ 2.06
IRF8-203ENST00000563180 UHRF1BP1LA0JNW5 1464 aa27.86■■■□□ 2.05
IRF8-203ENST00000563180 FHOD3Q2V2M9 1422 aa27.86■■■□□ 2.05
IRF8-203ENST00000563180 ABCC2Q92887 1545 aa27.85■■■□□ 2.05
IRF8-203ENST00000563180 PLB1Q6P1J6 1458 aa27.85■■■□□ 2.05
IRF8-203ENST00000563180 ABCA8O94911 1581 aa27.82■■■□□ 2.04
IRF8-203ENST00000563180 LOC105371045A0A1W2PR82 267 aa27.81■■■□□ 2.04
IRF8-203ENST00000563180 TRHP20396 242 aaPredicted RBP27.8■■■□□ 2.04
IRF8-203ENST00000563180 ARHGAP35Q9NRY4 1499 aa27.8■■■□□ 2.04
IRF8-203ENST00000563180 KDM5BQ9UGL1 1544 aa27.73■■■□□ 2.03
IRF8-203ENST00000563180 MAPKBP1O60336 1514 aa27.72■■■□□ 2.03
IRF8-203ENST00000563180 ZCCHC11Q5TAX3 1644 aaKnown RBP27.71■■■□□ 2.03
IRF8-203ENST00000563180 RAPGEF6Q8TEU7 1601 aa27.71■■■□□ 2.03
IRF8-203ENST00000563180 CLIP1P30622 1438 aa27.7■■■□□ 2.03
IRF8-203ENST00000563180 ARID3CA6NKF2 412 aa27.65■■■□□ 2.02
IRF8-203ENST00000563180 FMN1Q68DA7 1419 aa27.64■■■□□ 2.01
IRF8-203ENST00000563180 ASXL2Q76L83 1435 aa27.64■■■□□ 2.01
IRF8-203ENST00000563180 CEP162Q5TB80 1403 aa27.61■■■□□ 2.01
IRF8-203ENST00000563180 KIF13AQ9H1H9 1805 aa27.6■■■□□ 2.01
IRF8-203ENST00000563180 ATP10BO94823 1461 aa27.6■■■□□ 2.01
IRF8-203ENST00000563180 NUP153P49790 1475 aaKnown RBP27.6■■■□□ 2.01
IRF8-203ENST00000563180 ABCC10Q5T3U5 1492 aa27.59■■■□□ 2.01
IRF8-203ENST00000563180 FAM69CQ0P6D2 419 aa27.57■■■□□ 2
IRF8-203ENST00000563180 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
IRF8-203ENST00000563180 DIP2BQ9P265 1576 aa27.56■■■□□ 2
IRF8-203ENST00000563180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.54■■■□□ 2
IRF8-203ENST00000563180 HNRNPUL2Q1KMD3 747 aaKnown RBP27.54■■■□□ 2
IRF8-203ENST00000563180 HECW1Q76N89 1606 aa27.5■■□□□ 1.99
IRF8-203ENST00000563180 WDR7Q9Y4E6 1490 aa27.5■■□□□ 1.99
IRF8-203ENST00000563180 EPRSP07814 1512 aaKnown RBP27.47■■□□□ 1.99
IRF8-203ENST00000563180 PCF11O94913 1555 aaKnown RBP27.46■■□□□ 1.99
IRF8-203ENST00000563180 KCNH8Q96L42 1107 aa27.46■■□□□ 1.99
IRF8-203ENST00000563180 CASKIN1Q8WXD9 1431 aa27.45■■□□□ 1.99
IRF8-203ENST00000563180 CDK13Q14004 1512 aaKnown RBP27.44■■□□□ 1.98
IRF8-203ENST00000563180 GLI2P10070 1586 aa27.44■■□□□ 1.98
IRF8-203ENST00000563180 LRRIQ1Q96JM4 1722 aa27.41■■□□□ 1.98
IRF8-203ENST00000563180 PLEKHD1A6NEE1 506 aa27.39■■□□□ 1.98
IRF8-203ENST00000563180 TSPOAP1O95153 1857 aa27.39■■□□□ 1.98
IRF8-203ENST00000563180 FYCO1Q9BQS8 1478 aa27.39■■□□□ 1.98
IRF8-203ENST00000563180 MAP3K4Q9Y6R4 1608 aa27.33■■□□□ 1.97
IRF8-203ENST00000563180 CCDC18Q5T9S5 1454 aa27.31■■□□□ 1.96
IRF8-203ENST00000563180 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
IRF8-203ENST00000563180 CFAP43Q8NDM7 1665 aa27.29■■□□□ 1.96
IRF8-203ENST00000563180 PPRC1Q5VV67 1664 aaKnown RBP27.27■■□□□ 1.96
IRF8-203ENST00000563180 CD109Q6YHK3 1445 aa27.25■■□□□ 1.95
IRF8-203ENST00000563180 VPS8Q8N3P4 1428 aa27.25■■□□□ 1.95
IRF8-203ENST00000563180 ABCA9Q8IUA7 1624 aa27.25■■□□□ 1.95
IRF8-203ENST00000563180 TROQ12816 1431 aaPredicted RBP27.21■■□□□ 1.95
IRF8-203ENST00000563180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.18■■□□□ 1.94
IRF8-203ENST00000563180 MAGI3Q5TCQ9 1506 aa27.17■■□□□ 1.94
IRF8-203ENST00000563180 TEX14Q8IWB6 1497 aa27.17■■□□□ 1.94
IRF8-203ENST00000563180 KIF14Q15058 1648 aa27.15■■□□□ 1.94
IRF8-203ENST00000563180 TTC37Q6PGP7 1564 aa27.14■■□□□ 1.94
IRF8-203ENST00000563180 KDM6BO15054 1643 aa27.09■■□□□ 1.93
IRF8-203ENST00000563180 MTUS2Q5JR59 1369 aa27.08■■□□□ 1.93
IRF8-203ENST00000563180 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
IRF8-203ENST00000563180 MYO5CQ9NQX4 1742 aa27.04■■□□□ 1.92
IRF8-203ENST00000563180 PLCH2O75038 1416 aa27.01■■□□□ 1.92
IRF8-203ENST00000563180 EHBP1L1Q8N3D4 1523 aa27.01■■□□□ 1.91
IRF8-203ENST00000563180 COL17A1Q9UMD9 1497 aaPredicted RBP27■■□□□ 1.91
IRF8-203ENST00000563180 NEO1Q92859 1461 aa27■■□□□ 1.91
IRF8-203ENST00000563180 MAP3K1Q13233 1512 aa26.99■■□□□ 1.91
IRF8-203ENST00000563180 APLP2Q06481 763 aa26.98■■□□□ 1.91
IRF8-203ENST00000563180 FANCAO15360 1455 aa26.98■■□□□ 1.91
IRF8-203ENST00000563180 PHLDB1Q86UU1 1377 aa26.97■■□□□ 1.91
IRF8-203ENST00000563180 CFAP74Q9C0B2 1584 aa26.96■■□□□ 1.91
IRF8-203ENST00000563180 ARAP3Q8WWN8 1544 aa26.94■■□□□ 1.9
IRF8-203ENST00000563180 LRRC9Q6ZRR7 1453 aa26.94■■□□□ 1.9
IRF8-203ENST00000563180 AKNAQ7Z591 1439 aa26.94■■□□□ 1.9
IRF8-203ENST00000563180 EFCAB2Q5VUJ9 269 aa26.94■■□□□ 1.9
IRF8-203ENST00000563180 CDC42BPAQ5VT25 1732 aa26.94■■□□□ 1.9
IRF8-203ENST00000563180 CDC42BPBQ9Y5S2 1711 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms