RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
CMTM4-203ENST00000561680 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
CMTM4-203ENST00000561680 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
CMTM4-203ENST00000561680 KIAA0586Q9BVV6 1533 aa20.58■□□□□ 0.89
CMTM4-203ENST00000561680 UBTFP17480 764 aaKnown RBP20.58■□□□□ 0.89
CMTM4-203ENST00000561680 SHROOM2Q13796 1616 aa20.56■□□□□ 0.88
CMTM4-203ENST00000561680 UGGT2Q9NYU1 1516 aa20.51■□□□□ 0.87
CMTM4-203ENST00000561680 SAMD9Q5K651 1589 aa20.5■□□□□ 0.87
CMTM4-203ENST00000561680 CEP162Q5TB80 1403 aa20.47■□□□□ 0.87
CMTM4-203ENST00000561680 EFCAB5A4FU69 1503 aa20.47■□□□□ 0.87
CMTM4-203ENST00000561680 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
CMTM4-203ENST00000561680 KIAA0556O60303 1618 aa20.44■□□□□ 0.86
CMTM4-203ENST00000561680 CLIP1P30622 1438 aa20.42■□□□□ 0.86
CMTM4-203ENST00000561680 DISP1Q96F81 1524 aa20.4■□□□□ 0.86
CMTM4-203ENST00000561680 ARHGAP35Q9NRY4 1499 aa20.4■□□□□ 0.86
CMTM4-203ENST00000561680 JPH4Q96JJ6 628 aa20.36■□□□□ 0.85
CMTM4-203ENST00000561680 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
CMTM4-203ENST00000561680 ARAP1Q96P48 1450 aa20.34■□□□□ 0.85
CMTM4-203ENST00000561680 PRG4Q92954 1404 aaPredicted RBP20.34■□□□□ 0.85
CMTM4-203ENST00000561680 RANGAP1P46060 587 aaPredicted RBP20.33■□□□□ 0.85
CMTM4-203ENST00000561680 CARMIL2Q6F5E8 1435 aa20.32■□□□□ 0.84
CMTM4-203ENST00000561680 FHOD3Q2V2M9 1422 aa20.28■□□□□ 0.84
CMTM4-203ENST00000561680 RIMBP3CA6NJZ7 1639 aa20.25■□□□□ 0.83
CMTM4-203ENST00000561680 RIMBP3BA6NNM3 1639 aa20.25■□□□□ 0.83
CMTM4-203ENST00000561680 RIMBP3Q9UFD9 1639 aa20.25■□□□□ 0.83
CMTM4-203ENST00000561680 ARHGEF11O15085 1522 aa20.24■□□□□ 0.83
CMTM4-203ENST00000561680 P3H3Q8IVL6 736 aa20.21■□□□□ 0.83
CMTM4-203ENST00000561680 PCF11O94913 1555 aaKnown RBP20.21■□□□□ 0.83
CMTM4-203ENST00000561680 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
CMTM4-203ENST00000561680 VPS8Q8N3P4 1428 aa20.19■□□□□ 0.82
CMTM4-203ENST00000561680 RAPGEF6Q8TEU7 1601 aa20.19■□□□□ 0.82
CMTM4-203ENST00000561680 LRRIQ1Q96JM4 1722 aa20.19■□□□□ 0.82
CMTM4-203ENST00000561680 ABCA8O94911 1581 aa20.16■□□□□ 0.82
CMTM4-203ENST00000561680 HECW1Q76N89 1606 aa20.15■□□□□ 0.82
CMTM4-203ENST00000561680 FYCO1Q9BQS8 1478 aa20.13■□□□□ 0.81
CMTM4-203ENST00000561680 PTPRGP23470 1445 aa20.13■□□□□ 0.81
CMTM4-203ENST00000561680 CASKIN1Q8WXD9 1431 aa20.1■□□□□ 0.81
CMTM4-203ENST00000561680 CFAP43Q8NDM7 1665 aa20.1■□□□□ 0.81
CMTM4-203ENST00000561680 PLB1Q6P1J6 1458 aa20.1■□□□□ 0.81
CMTM4-203ENST00000561680 ADCY10Q96PN6 1610 aa20.08■□□□□ 0.8
CMTM4-203ENST00000561680 ABCC2Q92887 1545 aa20.07■□□□□ 0.8
CMTM4-203ENST00000561680 UACAQ9BZF9 1416 aa20.05■□□□□ 0.8
CMTM4-203ENST00000561680 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
CMTM4-203ENST00000561680 NUP153P49790 1475 aaKnown RBP20.05■□□□□ 0.8
CMTM4-203ENST00000561680 TTBK1Q5TCY1 1321 aaPredicted RBP20.04■□□□□ 0.8
CMTM4-203ENST00000561680 ZCCHC11Q5TAX3 1644 aaKnown RBP20.01■□□□□ 0.79
CMTM4-203ENST00000561680 TIAM1Q13009 1591 aa20■□□□□ 0.79
CMTM4-203ENST00000561680 CCDC18Q5T9S5 1454 aa20■□□□□ 0.79
CMTM4-203ENST00000561680 EPRSP07814 1512 aaKnown RBP19.99■□□□□ 0.79
CMTM4-203ENST00000561680 MAP3K1Q13233 1512 aa19.99■□□□□ 0.79
CMTM4-203ENST00000561680 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
CMTM4-203ENST00000561680 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
CMTM4-203ENST00000561680 KDM5BQ9UGL1 1544 aa19.95■□□□□ 0.78
CMTM4-203ENST00000561680 ATP10BO94823 1461 aa19.92■□□□□ 0.78
CMTM4-203ENST00000561680 ATP1B4Q9UN42 357 aaPredicted RBP19.9■□□□□ 0.78
CMTM4-203ENST00000561680 CYB5RLQ6IPT4 315 aa19.88■□□□□ 0.77
CMTM4-203ENST00000561680 MAGI3Q5TCQ9 1506 aa19.87■□□□□ 0.77
CMTM4-203ENST00000561680 EHBP1L1Q8N3D4 1523 aa19.86■□□□□ 0.77
CMTM4-203ENST00000561680 LRRC9Q6ZRR7 1453 aa19.85■□□□□ 0.77
CMTM4-203ENST00000561680 APLP2Q06481 763 aa19.84■□□□□ 0.77
CMTM4-203ENST00000561680 SUPT6HQ7KZ85 1726 aaKnown RBP19.83■□□□□ 0.77
CMTM4-203ENST00000561680 ARID3CA6NKF2 412 aa19.83■□□□□ 0.77
CMTM4-203ENST00000561680 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
CMTM4-203ENST00000561680 KIF14Q15058 1648 aa19.79■□□□□ 0.76
CMTM4-203ENST00000561680 TROQ12816 1431 aaPredicted RBP19.78■□□□□ 0.76
CMTM4-203ENST00000561680 MTUS2Q5JR59 1369 aa19.77■□□□□ 0.76
CMTM4-203ENST00000561680 WDR7Q9Y4E6 1490 aa19.77■□□□□ 0.76
CMTM4-203ENST00000561680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
CMTM4-203ENST00000561680 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
CMTM4-203ENST00000561680 KANK4Q5T7N3 995 aaPredicted RBP19.76■□□□□ 0.75
CMTM4-203ENST00000561680 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
CMTM4-203ENST00000561680 ASXL2Q76L83 1435 aa19.75■□□□□ 0.75
CMTM4-203ENST00000561680 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
CMTM4-203ENST00000561680 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
CMTM4-203ENST00000561680 ITSN2Q9NZM3 1697 aa19.71■□□□□ 0.75
CMTM4-203ENST00000561680 MYO5CQ9NQX4 1742 aa19.71■□□□□ 0.75
CMTM4-203ENST00000561680 PLEKHD1A6NEE1 506 aa19.71■□□□□ 0.75
CMTM4-203ENST00000561680 KIF13AQ9H1H9 1805 aa19.71■□□□□ 0.75
CMTM4-203ENST00000561680 TTC37Q6PGP7 1564 aa19.7■□□□□ 0.74
CMTM4-203ENST00000561680 ABCA9Q8IUA7 1624 aa19.69■□□□□ 0.74
CMTM4-203ENST00000561680 NCOA2Q15596 1464 aa19.69■□□□□ 0.74
CMTM4-203ENST00000561680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.74
CMTM4-203ENST00000561680 ABCC10Q5T3U5 1492 aa19.67■□□□□ 0.74
CMTM4-203ENST00000561680 DIP2BQ9P265 1576 aa19.67■□□□□ 0.74
CMTM4-203ENST00000561680 PPARGC1BQ86YN6 1023 aaKnown RBP19.67■□□□□ 0.74
CMTM4-203ENST00000561680 CDC42BPBQ9Y5S2 1711 aa19.67■□□□□ 0.74
CMTM4-203ENST00000561680 PREX2Q70Z35 1606 aa19.66■□□□□ 0.74
CMTM4-203ENST00000561680 GLI2P10070 1586 aa19.64■□□□□ 0.73
CMTM4-203ENST00000561680 MAP3K4Q9Y6R4 1608 aa19.63■□□□□ 0.73
CMTM4-203ENST00000561680 PHLDB1Q86UU1 1377 aa19.59■□□□□ 0.73
CMTM4-203ENST00000561680 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
CMTM4-203ENST00000561680 TSPOAP1O95153 1857 aa19.58■□□□□ 0.72
CMTM4-203ENST00000561680 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
CMTM4-203ENST00000561680 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
CMTM4-203ENST00000561680 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
CMTM4-203ENST00000561680 CCNB3Q8WWL7 1395 aa19.56■□□□□ 0.72
CMTM4-203ENST00000561680 PPRC1Q5VV67 1664 aaKnown RBP19.56■□□□□ 0.72
CMTM4-203ENST00000561680 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
CMTM4-203ENST00000561680 CFAP74Q9C0B2 1584 aa19.53■□□□□ 0.72
CMTM4-203ENST00000561680 FGD6Q6ZV73 1430 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms