RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 OSCARQ8IYS5 282 aa37.84■■■■□ 3.65
TMEM249-201ENST00000561638 CTTNBP2Q8WZ74 1663 aa37.76■■■■□ 3.64
TMEM249-201ENST00000561638 KIAA0586Q9BVV6 1533 aa37.74■■■■□ 3.63
TMEM249-201ENST00000561638 IQGAP2Q13576 1575 aa37.68■■■■□ 3.62
TMEM249-201ENST00000561638 TNIKQ9UKE5 1360 aa37.68■■■■□ 3.62
TMEM249-201ENST00000561638 CLASP1Q7Z460 1538 aa37.65■■■■□ 3.62
TMEM249-201ENST00000561638 RANGAP1P46060 587 aaPredicted RBP37.64■■■■□ 3.62
TMEM249-201ENST00000561638 JPH4Q96JJ6 628 aa37.55■■■■□ 3.6
TMEM249-201ENST00000561638 UGGT2Q9NYU1 1516 aa37.45■■■■□ 3.59
TMEM249-201ENST00000561638 SHROOM2Q13796 1616 aa37.45■■■■□ 3.58
TMEM249-201ENST00000561638 CEP162Q5TB80 1403 aa37.42■■■■□ 3.58
TMEM249-201ENST00000561638 PRG4Q92954 1404 aaPredicted RBP37.41■■■■□ 3.58
TMEM249-201ENST00000561638 CLIP1P30622 1438 aa37.39■■■■□ 3.58
TMEM249-201ENST00000561638 CARMIL2Q6F5E8 1435 aa37.37■■■■□ 3.57
TMEM249-201ENST00000561638 EFCAB5A4FU69 1503 aa37.33■■■■□ 3.57
TMEM249-201ENST00000561638 P3H3Q8IVL6 736 aa37.32■■■■□ 3.57
TMEM249-201ENST00000561638 DISP1Q96F81 1524 aa37.31■■■■□ 3.56
TMEM249-201ENST00000561638 SAMD9Q5K651 1589 aa37.3■■■■□ 3.56
TMEM249-201ENST00000561638 KIAA0556O60303 1618 aa37.29■■■■□ 3.56
TMEM249-201ENST00000561638 ARHGAP35Q9NRY4 1499 aa37.27■■■■□ 3.56
TMEM249-201ENST00000561638 ERCC6L2Q5T890 1561 aa37.25■■■■□ 3.55
TMEM249-201ENST00000561638 TTBK1Q5TCY1 1321 aaPredicted RBP37.21■■■■□ 3.55
TMEM249-201ENST00000561638 FHOD3Q2V2M9 1422 aa37.21■■■■□ 3.55
TMEM249-201ENST00000561638 ARHGEF11O15085 1522 aa37.19■■■■□ 3.54
TMEM249-201ENST00000561638 ARAP1Q96P48 1450 aa37.12■■■■□ 3.53
TMEM249-201ENST00000561638 RIMBP3CA6NJZ7 1639 aa37.08■■■■□ 3.53
TMEM249-201ENST00000561638 RIMBP3BA6NNM3 1639 aa37.08■■■■□ 3.53
TMEM249-201ENST00000561638 RIMBP3Q9UFD9 1639 aa37.08■■■■□ 3.53
TMEM249-201ENST00000561638 PTPRGP23470 1445 aa37.08■■■■□ 3.53
TMEM249-201ENST00000561638 DNAJC5Q9H3Z4 198 aa37.02■■■■□ 3.52
TMEM249-201ENST00000561638 FMN1Q68DA7 1419 aa37.02■■■■□ 3.52
TMEM249-201ENST00000561638 VPS8Q8N3P4 1428 aa36.9■■■■□ 3.5
TMEM249-201ENST00000561638 CYB5RLQ6IPT4 315 aa36.89■■■■□ 3.5
TMEM249-201ENST00000561638 PLB1Q6P1J6 1458 aa36.88■■■■□ 3.49
TMEM249-201ENST00000561638 ATP1B4Q9UN42 357 aaPredicted RBP36.86■■■■□ 3.49
TMEM249-201ENST00000561638 UACAQ9BZF9 1416 aa36.83■■■■□ 3.49
TMEM249-201ENST00000561638 RAPGEF6Q8TEU7 1601 aa36.81■■■■□ 3.48
TMEM249-201ENST00000561638 PCF11O94913 1555 aaKnown RBP36.8■■■■□ 3.48
TMEM249-201ENST00000561638 ABCA8O94911 1581 aa36.79■■■■□ 3.48
TMEM249-201ENST00000561638 CASKIN1Q8WXD9 1431 aa36.78■■■■□ 3.48
TMEM249-201ENST00000561638 FYCO1Q9BQS8 1478 aa36.76■■■■□ 3.47
TMEM249-201ENST00000561638 ABCC2Q92887 1545 aa36.74■■■■□ 3.47
TMEM249-201ENST00000561638 HECW1Q76N89 1606 aa36.73■■■■□ 3.47
TMEM249-201ENST00000561638 ARID3CA6NKF2 412 aa36.71■■■■□ 3.47
TMEM249-201ENST00000561638 UHRF1BP1LA0JNW5 1464 aa36.7■■■■□ 3.46
TMEM249-201ENST00000561638 NUP153P49790 1475 aaKnown RBP36.68■■■■□ 3.46
TMEM249-201ENST00000561638 ADCY10Q96PN6 1610 aa36.68■■■■□ 3.46
TMEM249-201ENST00000561638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.63■■■■□ 3.45
TMEM249-201ENST00000561638 HNRNPUL2Q1KMD3 747 aaKnown RBP36.63■■■■□ 3.45
TMEM249-201ENST00000561638 APLP2Q06481 763 aa36.61■■■■□ 3.45
TMEM249-201ENST00000561638 EPRSP07814 1512 aaKnown RBP36.59■■■■□ 3.45
TMEM249-201ENST00000561638 NPM1P06748 294 aaKnown RBP eCLIP36.58■■■■□ 3.45
TMEM249-201ENST00000561638 CCDC18Q5T9S5 1454 aa36.57■■■■□ 3.45
TMEM249-201ENST00000561638 CDK13Q14004 1512 aaKnown RBP36.54■■■■□ 3.44
TMEM249-201ENST00000561638 KDM5BQ9UGL1 1544 aa36.53■■■■□ 3.44
TMEM249-201ENST00000561638 ATP10BO94823 1461 aa36.53■■■■□ 3.44
TMEM249-201ENST00000561638 LRRIQ1Q96JM4 1722 aa36.52■■■■□ 3.44
TMEM249-201ENST00000561638 ZCCHC11Q5TAX3 1644 aaKnown RBP36.49■■■■□ 3.43
TMEM249-201ENST00000561638 CDK11AQ9UQ88 783 aaPredicted RBP36.44■■■■□ 3.42
TMEM249-201ENST00000561638 TIAM1Q13009 1591 aa36.44■■■■□ 3.42
TMEM249-201ENST00000561638 CFAP43Q8NDM7 1665 aa36.42■■■■□ 3.42
TMEM249-201ENST00000561638 MAP3K1Q13233 1512 aa36.39■■■■□ 3.42
TMEM249-201ENST00000561638 PLEKHD1A6NEE1 506 aa36.37■■■■□ 3.41
TMEM249-201ENST00000561638 MTUS2Q5JR59 1369 aa36.34■■■■□ 3.41
TMEM249-201ENST00000561638 ASXL2Q76L83 1435 aa36.31■■■■□ 3.4
TMEM249-201ENST00000561638 KANK4Q5T7N3 995 aaPredicted RBP36.28■■■■□ 3.4
TMEM249-201ENST00000561638 LRRC9Q6ZRR7 1453 aa36.27■■■■□ 3.4
TMEM249-201ENST00000561638 MAPKBP1O60336 1514 aa36.27■■■■□ 3.4
TMEM249-201ENST00000561638 WDR7Q9Y4E6 1490 aa36.26■■■■□ 3.4
TMEM249-201ENST00000561638 PPARGC1BQ86YN6 1023 aaKnown RBP36.26■■■■□ 3.4
TMEM249-201ENST00000561638 MAGI3Q5TCQ9 1506 aa36.26■■■■□ 3.39
TMEM249-201ENST00000561638 TROQ12816 1431 aaPredicted RBP36.25■■■■□ 3.39
TMEM249-201ENST00000561638 EHBP1L1Q8N3D4 1523 aa36.23■■■■□ 3.39
TMEM249-201ENST00000561638 KCNH8Q96L42 1107 aa36.22■■■■□ 3.39
TMEM249-201ENST00000561638 KIF14Q15058 1648 aa36.13■■■■□ 3.37
TMEM249-201ENST00000561638 SUPT6HQ7KZ85 1726 aaKnown RBP36.09■■■■□ 3.37
TMEM249-201ENST00000561638 NCOA2Q15596 1464 aa36.04■■■■□ 3.36
TMEM249-201ENST00000561638 ABCC10Q5T3U5 1492 aa36.01■■■■□ 3.35
TMEM249-201ENST00000561638 FAM69CQ0P6D2 419 aa35.99■■■■□ 3.35
TMEM249-201ENST00000561638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.99■■■■□ 3.35
TMEM249-201ENST00000561638 DIP2BQ9P265 1576 aa35.98■■■■□ 3.35
TMEM249-201ENST00000561638 TTC37Q6PGP7 1564 aa35.95■■■■□ 3.35
TMEM249-201ENST00000561638 CCNB3Q8WWL7 1395 aa35.95■■■■□ 3.35
TMEM249-201ENST00000561638 ABCA9Q8IUA7 1624 aa35.92■■■■□ 3.34
TMEM249-201ENST00000561638 GLI2P10070 1586 aa35.9■■■■□ 3.34
TMEM249-201ENST00000561638 TRHP20396 242 aaPredicted RBP35.9■■■■□ 3.34
TMEM249-201ENST00000561638 PHLDB1Q86UU1 1377 aa35.88■■■■□ 3.33
TMEM249-201ENST00000561638 CD109Q6YHK3 1445 aa35.85■■■■□ 3.33
TMEM249-201ENST00000561638 MYO5CQ9NQX4 1742 aa35.84■■■■□ 3.33
TMEM249-201ENST00000561638 KIF13AQ9H1H9 1805 aa35.84■■■■□ 3.33
TMEM249-201ENST00000561638 MYOM3Q5VTT5 1437 aa35.83■■■■□ 3.33
TMEM249-201ENST00000561638 GPATCH8Q9UKJ3 1502 aaKnown RBP35.83■■■■□ 3.33
TMEM249-201ENST00000561638 ITSN2Q9NZM3 1697 aa35.81■■■■□ 3.32
TMEM249-201ENST00000561638 CDC42BPAQ5VT25 1732 aa35.8■■■■□ 3.32
TMEM249-201ENST00000561638 MAP3K4Q9Y6R4 1608 aa35.8■■■■□ 3.32
TMEM249-201ENST00000561638 CFDP1Q9UEE9 299 aaPredicted RBP35.79■■■■□ 3.32
TMEM249-201ENST00000561638 PLCH2O75038 1416 aa35.78■■■■□ 3.32
TMEM249-201ENST00000561638 PREX2Q70Z35 1606 aa35.78■■■■□ 3.32
TMEM249-201ENST00000561638 ARHGAP5Q13017 1502 aa35.77■■■■□ 3.32
TMEM249-201ENST00000561638 ZNF777Q9ULD5 760 aaPredicted RBP35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms