RNA–Protein interactions for RNA: ENST00000561366.1

IDH3A-223, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 3 BASIC

Gene IDH3A, Length 389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-223	ENST00000561366	CUL7	Q14999	1698 aa		11.57	□□□□□ -0.56
IDH3A-223	ENST00000561366	JPH4	Q96JJ6	628 aa		11.57	□□□□□ -0.56
IDH3A-223	ENST00000561366	NUP160	Q12769	1436 aa		11.57	□□□□□ -0.56
IDH3A-223	ENST00000561366	LOC105371045	A0A1W2PR82	267 aa		11.54	□□□□□ -0.56
IDH3A-223	ENST00000561366	CYB5RL	Q6IPT4	315 aa		11.53	□□□□□ -0.56
IDH3A-223	ENST00000561366	P3H3	Q8IVL6	736 aa		11.53	□□□□□ -0.56
IDH3A-223	ENST00000561366	CLASP1	Q7Z460	1538 aa		11.53	□□□□□ -0.56
IDH3A-223	ENST00000561366	PRG4	Q92954	1404 aa	Predicted RBP	11.51	□□□□□ -0.57
IDH3A-223	ENST00000561366	KIAA0586	Q9BVV6	1533 aa		11.5	□□□□□ -0.57
IDH3A-223	ENST00000561366	ARHGEF11	O15085	1522 aa		11.48	□□□□□ -0.57
IDH3A-223	ENST00000561366	ERCC6L2	Q5T890	1561 aa		11.48	□□□□□ -0.57
IDH3A-223	ENST00000561366	GOLGA3	Q08378	1498 aa		11.47	□□□□□ -0.57
IDH3A-223	ENST00000561366	RIMBP3C	A6NJZ7	1639 aa		11.46	□□□□□ -0.58
IDH3A-223	ENST00000561366	RIMBP3B	A6NNM3	1639 aa		11.46	□□□□□ -0.58
IDH3A-223	ENST00000561366	RIMBP3	Q9UFD9	1639 aa		11.46	□□□□□ -0.58
IDH3A-223	ENST00000561366	SENP3	Q9H4L4	574 aa	Predicted RBP	11.44	□□□□□ -0.58
IDH3A-223	ENST00000561366	KIF21B	O75037	1637 aa		11.44	□□□□□ -0.58
IDH3A-223	ENST00000561366	IQGAP2	Q13576	1575 aa		11.44	□□□□□ -0.58
IDH3A-223	ENST00000561366	ARAP1	Q96P48	1450 aa		11.42	□□□□□ -0.58
IDH3A-223	ENST00000561366	CARMIL2	Q6F5E8	1435 aa		11.41	□□□□□ -0.58
IDH3A-223	ENST00000561366	SHROOM2	Q13796	1616 aa		11.39	□□□□□ -0.59
IDH3A-223	ENST00000561366	ARID3C	A6NKF2	412 aa		11.39	□□□□□ -0.59
IDH3A-223	ENST00000561366	PTPRG	P23470	1445 aa		11.39	□□□□□ -0.59
IDH3A-223	ENST00000561366	DISP1	Q96F81	1524 aa		11.39	□□□□□ -0.59
IDH3A-223	ENST00000561366	TNIK	Q9UKE5	1360 aa		11.38	□□□□□ -0.59
IDH3A-223	ENST00000561366	UGGT2	Q9NYU1	1516 aa		11.37	□□□□□ -0.59
IDH3A-223	ENST00000561366	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.37	□□□□□ -0.59
IDH3A-223	ENST00000561366	CTTNBP2	Q8WZ74	1663 aa		11.36	□□□□□ -0.59
IDH3A-223	ENST00000561366	FHOD3	Q2V2M9	1422 aa		11.35	□□□□□ -0.59
IDH3A-223	ENST00000561366	KIAA0556	O60303	1618 aa		11.33	□□□□□ -0.6
IDH3A-223	ENST00000561366	NPM1	P06748	294 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
IDH3A-223	ENST00000561366	CLIP1	P30622	1438 aa		11.31	□□□□□ -0.6
IDH3A-223	ENST00000561366	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.3	□□□□□ -0.6
IDH3A-223	ENST00000561366	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.3	□□□□□ -0.6
IDH3A-223	ENST00000561366	ARHGAP35	Q9NRY4	1499 aa		11.3	□□□□□ -0.6
IDH3A-223	ENST00000561366	PLB1	Q6P1J6	1458 aa		11.29	□□□□□ -0.6
IDH3A-223	ENST00000561366	CEP162	Q5TB80	1403 aa		11.28	□□□□□ -0.6
IDH3A-223	ENST00000561366	UACA	Q9BZF9	1416 aa		11.28	□□□□□ -0.6
IDH3A-223	ENST00000561366	TRH	P20396	242 aa	Predicted RBP	11.28	□□□□□ -0.6
IDH3A-223	ENST00000561366	SAMD9	Q5K651	1589 aa		11.27	□□□□□ -0.61
IDH3A-223	ENST00000561366	PHF23	Q9BUL5	403 aa	Predicted RBP	11.25	□□□□□ -0.61
IDH3A-223	ENST00000561366	EFCAB5	A4FU69	1503 aa		11.25	□□□□□ -0.61
IDH3A-223	ENST00000561366	KCNH8	Q96L42	1107 aa		11.23	□□□□□ -0.61
IDH3A-223	ENST00000561366	ADCY10	Q96PN6	1610 aa		11.22	□□□□□ -0.61
IDH3A-223	ENST00000561366	ABCC2	Q92887	1545 aa		11.2	□□□□□ -0.62
IDH3A-223	ENST00000561366	ABCA8	O94911	1581 aa		11.2	□□□□□ -0.62
IDH3A-223	ENST00000561366	UHRF1BP1L	A0JNW5	1464 aa		11.19	□□□□□ -0.62
IDH3A-223	ENST00000561366	FMN1	Q68DA7	1419 aa		11.19	□□□□□ -0.62
IDH3A-223	ENST00000561366	FAM69C	Q0P6D2	419 aa		11.18	□□□□□ -0.62
IDH3A-223	ENST00000561366	ATP10B	O94823	1461 aa		11.18	□□□□□ -0.62
IDH3A-223	ENST00000561366	NUP153	P49790	1475 aa	Known RBP	11.17	□□□□□ -0.62
IDH3A-223	ENST00000561366	ASXL2	Q76L83	1435 aa		11.17	□□□□□ -0.62
IDH3A-223	ENST00000561366	RAPGEF6	Q8TEU7	1601 aa		11.17	□□□□□ -0.62
IDH3A-223	ENST00000561366	PLEKHD1	A6NEE1	506 aa		11.16	□□□□□ -0.62
IDH3A-223	ENST00000561366	KDM5B	Q9UGL1	1544 aa		11.15	□□□□□ -0.62
IDH3A-223	ENST00000561366	CDK13	Q14004	1512 aa	Known RBP	11.14	□□□□□ -0.63
IDH3A-223	ENST00000561366	CASKIN1	Q8WXD9	1431 aa		11.14	□□□□□ -0.63
IDH3A-223	ENST00000561366	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.13	□□□□□ -0.63
IDH3A-223	ENST00000561366	PCF11	O94913	1555 aa	Known RBP	11.12	□□□□□ -0.63
IDH3A-223	ENST00000561366	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.12	□□□□□ -0.63
IDH3A-223	ENST00000561366	VPS8	Q8N3P4	1428 aa		11.11	□□□□□ -0.63
IDH3A-223	ENST00000561366	EPRS	P07814	1512 aa	Known RBP	11.11	□□□□□ -0.63
IDH3A-223	ENST00000561366	APLP2	Q06481	763 aa		11.1	□□□□□ -0.63
IDH3A-223	ENST00000561366	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.1	□□□□□ -0.63
IDH3A-223	ENST00000561366	WDR7	Q9Y4E6	1490 aa		11.09	□□□□□ -0.63
IDH3A-223	ENST00000561366	HECW1	Q76N89	1606 aa		11.09	□□□□□ -0.63
IDH3A-223	ENST00000561366	FYCO1	Q9BQS8	1478 aa		11.08	□□□□□ -0.64
IDH3A-223	ENST00000561366	MAPKBP1	O60336	1514 aa		11.08	□□□□□ -0.64
IDH3A-223	ENST00000561366	ABCC10	Q5T3U5	1492 aa		11.07	□□□□□ -0.64
IDH3A-223	ENST00000561366	KANK4	Q5T7N3	995 aa	Predicted RBP	11.07	□□□□□ -0.64
IDH3A-223	ENST00000561366	MTUS2	Q5JR59	1369 aa		11.04	□□□□□ -0.64
IDH3A-223	ENST00000561366	CCDC18	Q5T9S5	1454 aa		11.04	□□□□□ -0.64
IDH3A-223	ENST00000561366	DIP2B	Q9P265	1576 aa		11.03	□□□□□ -0.64
IDH3A-223	ENST00000561366	TRO	Q12816	1431 aa	Predicted RBP	11.02	□□□□□ -0.64
IDH3A-223	ENST00000561366	CD109	Q6YHK3	1445 aa		11.02	□□□□□ -0.64
IDH3A-223	ENST00000561366	LRRIQ1	Q96JM4	1722 aa		11.02	□□□□□ -0.65
IDH3A-223	ENST00000561366	MAGI3	Q5TCQ9	1506 aa		11.02	□□□□□ -0.65
IDH3A-223	ENST00000561366	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.01	□□□□□ -0.65
IDH3A-223	ENST00000561366	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.97	□□□□□ -0.65
IDH3A-223	ENST00000561366	GLI2	P10070	1586 aa		10.97	□□□□□ -0.65
IDH3A-223	ENST00000561366	TIAM1	Q13009	1591 aa		10.97	□□□□□ -0.65
IDH3A-223	ENST00000561366	KIF14	Q15058	1648 aa		10.97	□□□□□ -0.65
IDH3A-223	ENST00000561366	KIF13A	Q9H1H9	1805 aa		10.97	□□□□□ -0.65
IDH3A-223	ENST00000561366	TSPOAP1	O95153	1857 aa		10.97	□□□□□ -0.65
IDH3A-223	ENST00000561366	LRRC9	Q6ZRR7	1453 aa		10.96	□□□□□ -0.65
IDH3A-223	ENST00000561366	CCNB3	Q8WWL7	1395 aa		10.95	□□□□□ -0.66
IDH3A-223	ENST00000561366	EFCAB2	Q5VUJ9	269 aa		10.95	□□□□□ -0.66
IDH3A-223	ENST00000561366	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.95	□□□□□ -0.66
IDH3A-223	ENST00000561366	TTC37	Q6PGP7	1564 aa		10.94	□□□□□ -0.66
IDH3A-223	ENST00000561366	ZNF644	Q9H582	1327 aa	Predicted RBP	10.93	□□□□□ -0.66
IDH3A-223	ENST00000561366	RAPGEF3	O95398	923 aa		10.93	□□□□□ -0.66
IDH3A-223	ENST00000561366	NCOA2	Q15596	1464 aa		10.93	□□□□□ -0.66
IDH3A-223	ENST00000561366	PLCH2	O75038	1416 aa		10.92	□□□□□ -0.66
IDH3A-223	ENST00000561366	MAP3K4	Q9Y6R4	1608 aa		10.92	□□□□□ -0.66
IDH3A-223	ENST00000561366	MYT1L	Q9UL68	1186 aa		10.92	□□□□□ -0.66
IDH3A-223	ENST00000561366	EHBP1L1	Q8N3D4	1523 aa		10.92	□□□□□ -0.66
IDH3A-223	ENST00000561366	ABCA9	Q8IUA7	1624 aa		10.91	□□□□□ -0.66
IDH3A-223	ENST00000561366	ARHGAP5	Q13017	1502 aa		10.91	□□□□□ -0.66
IDH3A-223	ENST00000561366	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.91	□□□□□ -0.66
IDH3A-223	ENST00000561366	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.91	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms