RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
MARK3-225ENST00000561225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
MARK3-225ENST00000561225 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
MARK3-225ENST00000561225 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
MARK3-225ENST00000561225 SLC4A1APQ9BWU0 796 aaKnown RBP14.8□□□□□ -0.04
MARK3-225ENST00000561225 CLASP1Q7Z460 1538 aa14.8□□□□□ -0.04
MARK3-225ENST00000561225 RAD54L2Q9Y4B4 1467 aa14.77□□□□□ -0.04
MARK3-225ENST00000561225 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.04
MARK3-225ENST00000561225 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
MARK3-225ENST00000561225 SNAPC4Q5SXM2 1469 aa14.76□□□□□ -0.05
MARK3-225ENST00000561225 SOGA1O94964 1423 aa14.74□□□□□ -0.05
MARK3-225ENST00000561225 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
MARK3-225ENST00000561225 SYNJ1O43426 1573 aa14.73□□□□□ -0.05
MARK3-225ENST00000561225 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
MARK3-225ENST00000561225 MAGI1Q96QZ7 1491 aaPredicted RBP14.69□□□□□ -0.06
MARK3-225ENST00000561225 WDR97A6NE52 1622 aa14.69□□□□□ -0.06
MARK3-225ENST00000561225 GAPVD1Q14C86 1478 aa14.67□□□□□ -0.06
MARK3-225ENST00000561225 SYNJ2O15056 1496 aa14.66□□□□□ -0.06
MARK3-225ENST00000561225 FGD5Q6ZNL6 1462 aa14.66□□□□□ -0.06
MARK3-225ENST00000561225 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
MARK3-225ENST00000561225 GRIN2BQ13224 1484 aa14.65□□□□□ -0.06
MARK3-225ENST00000561225 CUX1P39880 1505 aa14.58□□□□□ -0.08
MARK3-225ENST00000561225 ERCC6L2Q5T890 1561 aa14.54□□□□□ -0.08
MARK3-225ENST00000561225 PBRM1Q86U86 1689 aa14.52□□□□□ -0.08
MARK3-225ENST00000561225 POLA2Q14181 598 aa14.48□□□□□ -0.09
MARK3-225ENST00000561225 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
MARK3-225ENST00000561225 ABCA10Q8WWZ4 1543 aa14.47□□□□□ -0.09
MARK3-225ENST00000561225 GRIN2AQ12879 1464 aa14.47□□□□□ -0.09
MARK3-225ENST00000561225 CEP170Q5SW79 1584 aa14.47□□□□□ -0.09
MARK3-225ENST00000561225 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
MARK3-225ENST00000561225 NUP160Q12769 1436 aa14.45□□□□□ -0.1
MARK3-225ENST00000561225 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
MARK3-225ENST00000561225 SP7Q8TDD2 431 aaPredicted RBP14.43□□□□□ -0.1
MARK3-225ENST00000561225 KIF13AQ9H1H9 1805 aa14.43□□□□□ -0.1
MARK3-225ENST00000561225 SHROOM2Q13796 1616 aa14.41□□□□□ -0.1
MARK3-225ENST00000561225 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
MARK3-225ENST00000561225 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
MARK3-225ENST00000561225 KDM4FA0A1W2PPD8 638 aa14.35□□□□□ -0.11
MARK3-225ENST00000561225 ILDR1Q86SU0 546 aaPredicted RBP14.35□□□□□ -0.11
MARK3-225ENST00000561225 ABCC10Q5T3U5 1492 aa14.35□□□□□ -0.11
MARK3-225ENST00000561225 FAM69CQ0P6D2 419 aa14.34□□□□□ -0.11
MARK3-225ENST00000561225 PRG4Q92954 1404 aaPredicted RBP14.33□□□□□ -0.11
MARK3-225ENST00000561225 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.12
MARK3-225ENST00000561225 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
MARK3-225ENST00000561225 JPH4Q96JJ6 628 aa14.29□□□□□ -0.12
MARK3-225ENST00000561225 MAPKBP1O60336 1514 aa14.29□□□□□ -0.12
MARK3-225ENST00000561225 DIP2BQ9P265 1576 aa14.28□□□□□ -0.12
MARK3-225ENST00000561225 ERICH3Q5RHP9 1530 aa14.27□□□□□ -0.12
MARK3-225ENST00000561225 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
MARK3-225ENST00000561225 KDM6BO15054 1643 aa14.26□□□□□ -0.13
MARK3-225ENST00000561225 TOP2BQ02880 1626 aa14.22□□□□□ -0.13
MARK3-225ENST00000561225 ADCY10Q96PN6 1610 aa14.22□□□□□ -0.13
MARK3-225ENST00000561225 BIVM-ERCC5R4GMW8 1640 aa14.21□□□□□ -0.13
MARK3-225ENST00000561225 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
MARK3-225ENST00000561225 PIP4P2Q8N4L2 257 aa14.18□□□□□ -0.14
MARK3-225ENST00000561225 REM2Q8IYK8 340 aaPredicted RBP14.15□□□□□ -0.14
MARK3-225ENST00000561225 ZBTB12Q9Y330 459 aaPredicted RBP14.15□□□□□ -0.14
MARK3-225ENST00000561225 TSPOAP1O95153 1857 aa14.14□□□□□ -0.15
MARK3-225ENST00000561225 ZBTB22O15209 634 aa14.13□□□□□ -0.15
MARK3-225ENST00000561225 HAX1O00165 279 aa14.11□□□□□ -0.15
MARK3-225ENST00000561225 ADGRL1O94910 1474 aa14.11□□□□□ -0.15
MARK3-225ENST00000561225 KIAA0586Q9BVV6 1533 aa14.1□□□□□ -0.15
MARK3-225ENST00000561225 HECW2Q9P2P5 1572 aa14.05□□□□□ -0.16
MARK3-225ENST00000561225 PPRC1Q5VV67 1664 aaKnown RBP14.05□□□□□ -0.16
MARK3-225ENST00000561225 PTPRGP23470 1445 aa14.05□□□□□ -0.16
MARK3-225ENST00000561225 ASXL2Q76L83 1435 aa14.04□□□□□ -0.16
MARK3-225ENST00000561225 ABCC2Q92887 1545 aa14.04□□□□□ -0.16
MARK3-225ENST00000561225 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
MARK3-225ENST00000561225 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
MARK3-225ENST00000561225 COL17A1Q9UMD9 1497 aaPredicted RBP14.03□□□□□ -0.16
MARK3-225ENST00000561225 GLI2P10070 1586 aa14.03□□□□□ -0.16
MARK3-225ENST00000561225 PLB1Q6P1J6 1458 aa14.02□□□□□ -0.16
MARK3-225ENST00000561225 IGF1RP08069 1367 aa14.01□□□□□ -0.17
MARK3-225ENST00000561225 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
MARK3-225ENST00000561225 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
MARK3-225ENST00000561225 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
MARK3-225ENST00000561225 TNIKQ9UKE5 1360 aa13.99□□□□□ -0.17
MARK3-225ENST00000561225 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
MARK3-225ENST00000561225 UHRF1BP1LA0JNW5 1464 aa13.96□□□□□ -0.17
MARK3-225ENST00000561225 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
MARK3-225ENST00000561225 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.18
MARK3-225ENST00000561225 EPRSP07814 1512 aaKnown RBP13.95□□□□□ -0.18
MARK3-225ENST00000561225 CUL7Q14999 1698 aa13.95□□□□□ -0.18
MARK3-225ENST00000561225 KIF27Q86VH2 1401 aa13.94□□□□□ -0.18
MARK3-225ENST00000561225 MAP3K4Q9Y6R4 1608 aa13.93□□□□□ -0.18
MARK3-225ENST00000561225 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
MARK3-225ENST00000561225 TEX14Q8IWB6 1497 aa13.93□□□□□ -0.18
MARK3-225ENST00000561225 KDM5BQ9UGL1 1544 aa13.91□□□□□ -0.18
MARK3-225ENST00000561225 FBXO41Q8TF61 875 aa13.9□□□□□ -0.18
MARK3-225ENST00000561225 CARMIL1Q5VZK9 1371 aa13.89□□□□□ -0.19
MARK3-225ENST00000561225 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
MARK3-225ENST00000561225 DISP1Q96F81 1524 aa13.88□□□□□ -0.19
MARK3-225ENST00000561225 EVX2Q03828 476 aa13.85□□□□□ -0.19
MARK3-225ENST00000561225 ZCCHC11Q5TAX3 1644 aaKnown RBP13.85□□□□□ -0.19
MARK3-225ENST00000561225 WDR7Q9Y4E6 1490 aa13.82□□□□□ -0.2
MARK3-225ENST00000561225 CSRNP3Q8WYN3 585 aa13.82□□□□□ -0.2
MARK3-225ENST00000561225 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
MARK3-225ENST00000561225 CD109Q6YHK3 1445 aa13.79□□□□□ -0.2
MARK3-225ENST00000561225 UGGT2Q9NYU1 1516 aa13.79□□□□□ -0.2
MARK3-225ENST00000561225 KIAA0556O60303 1618 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms