RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 CARMIL1Q5VZK9 1371 aa21.86■■□□□ 1.09
CHRNA3-208ENST00000561128 KIAA0586Q9BVV6 1533 aa21.83■■□□□ 1.09
CHRNA3-208ENST00000561128 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
CHRNA3-208ENST00000561128 IQGAP2Q13576 1575 aa21.74■■□□□ 1.07
CHRNA3-208ENST00000561128 RAPGEF2Q9Y4G8 1499 aa21.72■■□□□ 1.07
CHRNA3-208ENST00000561128 ADCY10Q96PN6 1610 aa21.69■■□□□ 1.06
CHRNA3-208ENST00000561128 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
CHRNA3-208ENST00000561128 DISP1Q96F81 1524 aa21.65■■□□□ 1.06
CHRNA3-208ENST00000561128 PRXQ9BXM0 1461 aa21.64■■□□□ 1.06
CHRNA3-208ENST00000561128 CTTNBP2Q8WZ74 1663 aa21.63■■□□□ 1.05
CHRNA3-208ENST00000561128 UGGT2Q9NYU1 1516 aa21.6■■□□□ 1.05
CHRNA3-208ENST00000561128 KIF13AQ9H1H9 1805 aa21.57■■□□□ 1.04
CHRNA3-208ENST00000561128 KIAA0556O60303 1618 aa21.57■■□□□ 1.04
CHRNA3-208ENST00000561128 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
CHRNA3-208ENST00000561128 TNIKQ9UKE5 1360 aa21.52■■□□□ 1.04
CHRNA3-208ENST00000561128 PTPRGP23470 1445 aa21.52■■□□□ 1.04
CHRNA3-208ENST00000561128 CARMIL2Q6F5E8 1435 aa21.51■■□□□ 1.03
CHRNA3-208ENST00000561128 MAPKBP1O60336 1514 aa21.5■■□□□ 1.03
CHRNA3-208ENST00000561128 DIP2BQ9P265 1576 aa21.48■■□□□ 1.03
CHRNA3-208ENST00000561128 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
CHRNA3-208ENST00000561128 ABCC10Q5T3U5 1492 aa21.43■■□□□ 1.02
CHRNA3-208ENST00000561128 ABCC2Q92887 1545 aa21.43■■□□□ 1.02
CHRNA3-208ENST00000561128 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
CHRNA3-208ENST00000561128 UHRF1BP1LA0JNW5 1464 aa21.41■■□□□ 1.02
CHRNA3-208ENST00000561128 EEA1Q15075 1411 aa21.4■■□□□ 1.02
CHRNA3-208ENST00000561128 UACAQ9BZF9 1416 aa21.4■■□□□ 1.02
CHRNA3-208ENST00000561128 FAM9AQ8IZU1 332 aaPredicted RBP21.4■■□□□ 1.02
CHRNA3-208ENST00000561128 PLB1Q6P1J6 1458 aa21.38■■□□□ 1.01
CHRNA3-208ENST00000561128 ZCCHC11Q5TAX3 1644 aaKnown RBP21.37■■□□□ 1.01
CHRNA3-208ENST00000561128 KIF21BO75037 1637 aa21.36■■□□□ 1.01
CHRNA3-208ENST00000561128 ABCA8O94911 1581 aa21.35■■□□□ 1.01
CHRNA3-208ENST00000561128 SAMD9Q5K651 1589 aa21.35■■□□□ 1.01
CHRNA3-208ENST00000561128 KDM5BQ9UGL1 1544 aa21.34■■□□□ 1.01
CHRNA3-208ENST00000561128 GOLGA3Q08378 1498 aa21.33■■□□□ 1.01
CHRNA3-208ENST00000561128 ASXL2Q76L83 1435 aa21.33■■□□□ 1.01
CHRNA3-208ENST00000561128 NPM1P06748 294 aaKnown RBP eCLIP21.32■■□□□ 1
CHRNA3-208ENST00000561128 FAM69CQ0P6D2 419 aa21.31■■□□□ 1
CHRNA3-208ENST00000561128 TSPOAP1O95153 1857 aa21.28■■□□□ 1
CHRNA3-208ENST00000561128 PPRC1Q5VV67 1664 aaKnown RBP21.28■■□□□ 1
CHRNA3-208ENST00000561128 P3H3Q8IVL6 736 aa21.26■□□□□ 0.99
CHRNA3-208ENST00000561128 GLI2P10070 1586 aa21.23■□□□□ 0.99
CHRNA3-208ENST00000561128 EPRSP07814 1512 aaKnown RBP21.21■□□□□ 0.99
CHRNA3-208ENST00000561128 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
CHRNA3-208ENST00000561128 FHOD3Q2V2M9 1422 aa21.2■□□□□ 0.98
CHRNA3-208ENST00000561128 MAP3K4Q9Y6R4 1608 aa21.19■□□□□ 0.98
CHRNA3-208ENST00000561128 RANGAP1P46060 587 aaPredicted RBP21.18■□□□□ 0.98
CHRNA3-208ENST00000561128 WDR7Q9Y4E6 1490 aa21.18■□□□□ 0.98
CHRNA3-208ENST00000561128 RAPGEF6Q8TEU7 1601 aa21.16■□□□□ 0.98
CHRNA3-208ENST00000561128 ARID3CA6NKF2 412 aa21.14■□□□□ 0.97
CHRNA3-208ENST00000561128 KDM6BO15054 1643 aa21.14■□□□□ 0.97
CHRNA3-208ENST00000561128 ATP10BO94823 1461 aa21.13■□□□□ 0.97
CHRNA3-208ENST00000561128 EFCAB5A4FU69 1503 aa21.11■□□□□ 0.97
CHRNA3-208ENST00000561128 NUP153P49790 1475 aaKnown RBP21.11■□□□□ 0.97
CHRNA3-208ENST00000561128 COL17A1Q9UMD9 1497 aaPredicted RBP21.06■□□□□ 0.96
CHRNA3-208ENST00000561128 ARHGAP35Q9NRY4 1499 aa21.05■□□□□ 0.96
CHRNA3-208ENST00000561128 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.96
CHRNA3-208ENST00000561128 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
CHRNA3-208ENST00000561128 CDK13Q14004 1512 aaKnown RBP20.99■□□□□ 0.95
CHRNA3-208ENST00000561128 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
CHRNA3-208ENST00000561128 ABCA9Q8IUA7 1624 aa20.96■□□□□ 0.95
CHRNA3-208ENST00000561128 MAGI3Q5TCQ9 1506 aa20.95■□□□□ 0.94
CHRNA3-208ENST00000561128 CD109Q6YHK3 1445 aa20.95■□□□□ 0.94
CHRNA3-208ENST00000561128 TEX14Q8IWB6 1497 aa20.94■□□□□ 0.94
CHRNA3-208ENST00000561128 LRRIQ1Q96JM4 1722 aa20.93■□□□□ 0.94
CHRNA3-208ENST00000561128 HECW1Q76N89 1606 aa20.89■□□□□ 0.93
CHRNA3-208ENST00000561128 PCF11O94913 1555 aaKnown RBP20.88■□□□□ 0.93
CHRNA3-208ENST00000561128 TTC37Q6PGP7 1564 aa20.88■□□□□ 0.93
CHRNA3-208ENST00000561128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.84■□□□□ 0.93
CHRNA3-208ENST00000561128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
CHRNA3-208ENST00000561128 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
CHRNA3-208ENST00000561128 FMN1Q68DA7 1419 aa20.84■□□□□ 0.93
CHRNA3-208ENST00000561128 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
CHRNA3-208ENST00000561128 KIF14Q15058 1648 aa20.79■□□□□ 0.92
CHRNA3-208ENST00000561128 ARAP3Q8WWN8 1544 aa20.78■□□□□ 0.92
CHRNA3-208ENST00000561128 KDM4FA0A1W2PPD8 638 aa20.76■□□□□ 0.91
CHRNA3-208ENST00000561128 CLIP1P30622 1438 aa20.76■□□□□ 0.91
CHRNA3-208ENST00000561128 PLEKHD1A6NEE1 506 aa20.73■□□□□ 0.91
CHRNA3-208ENST00000561128 ATP1B4Q9UN42 357 aaPredicted RBP20.73■□□□□ 0.91
CHRNA3-208ENST00000561128 NEO1Q92859 1461 aa20.73■□□□□ 0.91
CHRNA3-208ENST00000561128 CASKIN1Q8WXD9 1431 aa20.72■□□□□ 0.91
CHRNA3-208ENST00000561128 ADGRL1O94910 1474 aa20.72■□□□□ 0.91
CHRNA3-208ENST00000561128 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
CHRNA3-208ENST00000561128 RICTORQ6R327 1708 aa20.69■□□□□ 0.9
CHRNA3-208ENST00000561128 FANCAO15360 1455 aa20.69■□□□□ 0.9
CHRNA3-208ENST00000561128 FYCO1Q9BQS8 1478 aa20.69■□□□□ 0.9
CHRNA3-208ENST00000561128 TROQ12816 1431 aaPredicted RBP20.68■□□□□ 0.9
CHRNA3-208ENST00000561128 RAPGEF3O95398 923 aa20.66■□□□□ 0.9
CHRNA3-208ENST00000561128 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
CHRNA3-208ENST00000561128 MYO5CQ9NQX4 1742 aa20.66■□□□□ 0.9
CHRNA3-208ENST00000561128 CEP162Q5TB80 1403 aa20.65■□□□□ 0.9
CHRNA3-208ENST00000561128 CCDC18Q5T9S5 1454 aa20.63■□□□□ 0.89
CHRNA3-208ENST00000561128 AKNAQ7Z591 1439 aa20.63■□□□□ 0.89
CHRNA3-208ENST00000561128 PLCH2O75038 1416 aa20.61■□□□□ 0.89
CHRNA3-208ENST00000561128 PHLDB1Q86UU1 1377 aa20.61■□□□□ 0.89
CHRNA3-208ENST00000561128 ARHGEF40Q8TER5 1519 aa20.61■□□□□ 0.89
CHRNA3-208ENST00000561128 SIGLEC1Q9BZZ2 1709 aa20.61■□□□□ 0.89
CHRNA3-208ENST00000561128 DENND4BO75064 1496 aaPredicted RBP20.59■□□□□ 0.89
CHRNA3-208ENST00000561128 CDC42BPBQ9Y5S2 1711 aa20.58■□□□□ 0.89
CHRNA3-208ENST00000561128 PREX2Q70Z35 1606 aa20.58■□□□□ 0.89
CHRNA3-208ENST00000561128 LOC105371045A0A1W2PR82 267 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms