RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	KIF27	Q86VH2	1401 aa		13.69	□□□□□ -0.22
RNF31-222	ENST00000560631	TRIM41	Q8WV44	630 aa		13.67	□□□□□ -0.22
RNF31-222	ENST00000560631	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.66	□□□□□ -0.22
RNF31-222	ENST00000560631	FHAD1	B1AJZ9	1412 aa		13.65	□□□□□ -0.22
RNF31-222	ENST00000560631	IGF1R	P08069	1367 aa		13.65	□□□□□ -0.22
RNF31-222	ENST00000560631	ADAMTS12	P58397	1594 aa		13.65	□□□□□ -0.22
RNF31-222	ENST00000560631	FBLN2	P98095	1184 aa		13.63	□□□□□ -0.23
RNF31-222	ENST00000560631	GRIN2A	Q12879	1464 aa		13.61	□□□□□ -0.23
RNF31-222	ENST00000560631	CUL7	Q14999	1698 aa		13.6	□□□□□ -0.23
RNF31-222	ENST00000560631	CLASP1	Q7Z460	1538 aa		13.58	□□□□□ -0.24
RNF31-222	ENST00000560631	NUP160	Q12769	1436 aa		13.57	□□□□□ -0.24
RNF31-222	ENST00000560631	CARMIL1	Q5VZK9	1371 aa		13.57	□□□□□ -0.24
RNF31-222	ENST00000560631	RUSC2	Q8N2Y8	1516 aa		13.56	□□□□□ -0.24
RNF31-222	ENST00000560631	NCBP3	Q53F19	620 aa	Known RBP	13.55	□□□□□ -0.24
RNF31-222	ENST00000560631	CEP170	Q5SW79	1584 aa		13.53	□□□□□ -0.24
RNF31-222	ENST00000560631	EEA1	Q15075	1411 aa		13.52	□□□□□ -0.25
RNF31-222	ENST00000560631	ARHGEF11	O15085	1522 aa		13.49	□□□□□ -0.25
RNF31-222	ENST00000560631	RIMBP3C	A6NJZ7	1639 aa		13.49	□□□□□ -0.25
RNF31-222	ENST00000560631	RIMBP3B	A6NNM3	1639 aa		13.49	□□□□□ -0.25
RNF31-222	ENST00000560631	RIMBP3	Q9UFD9	1639 aa		13.49	□□□□□ -0.25
RNF31-222	ENST00000560631	RAPGEF2	Q9Y4G8	1499 aa		13.48	□□□□□ -0.25
RNF31-222	ENST00000560631	PRX	Q9BXM0	1461 aa		13.47	□□□□□ -0.25
RNF31-222	ENST00000560631	SHROOM2	Q13796	1616 aa		13.46	□□□□□ -0.25
RNF31-222	ENST00000560631	KIAA0586	Q9BVV6	1533 aa		13.46	□□□□□ -0.25
RNF31-222	ENST00000560631	CSRNP3	Q8WYN3	585 aa		13.46	□□□□□ -0.25
RNF31-222	ENST00000560631	NPM3	O75607	178 aa	Known RBP	13.43	□□□□□ -0.26
RNF31-222	ENST00000560631	JPH4	Q96JJ6	628 aa		13.43	□□□□□ -0.26
RNF31-222	ENST00000560631	ARAP1	Q96P48	1450 aa		13.4	□□□□□ -0.26
RNF31-222	ENST00000560631	IQGAP2	Q13576	1575 aa		13.37	□□□□□ -0.27
RNF31-222	ENST00000560631	PRG4	Q92954	1404 aa	Predicted RBP	13.36	□□□□□ -0.27
RNF31-222	ENST00000560631	ERCC6L2	Q5T890	1561 aa		13.36	□□□□□ -0.27
RNF31-222	ENST00000560631	CTTNBP2	Q8WZ74	1663 aa		13.35	□□□□□ -0.27
RNF31-222	ENST00000560631	KIF21B	O75037	1637 aa		13.35	□□□□□ -0.27
RNF31-222	ENST00000560631	CYB5RL	Q6IPT4	315 aa		13.34	□□□□□ -0.27
RNF31-222	ENST00000560631	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.33	□□□□□ -0.28	6e-8	■□□□□ 8.5
RNF31-222	ENST00000560631	UGGT2	Q9NYU1	1516 aa		13.33	□□□□□ -0.28
RNF31-222	ENST00000560631	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.31	□□□□□ -0.28
RNF31-222	ENST00000560631	CARMIL2	Q6F5E8	1435 aa		13.29	□□□□□ -0.28
RNF31-222	ENST00000560631	DISP1	Q96F81	1524 aa		13.28	□□□□□ -0.28
RNF31-222	ENST00000560631	TNIK	Q9UKE5	1360 aa		13.25	□□□□□ -0.29
RNF31-222	ENST00000560631	GOLGA3	Q08378	1498 aa		13.24	□□□□□ -0.29
RNF31-222	ENST00000560631	KIAA0556	O60303	1618 aa		13.23	□□□□□ -0.29
RNF31-222	ENST00000560631	PTPRG	P23470	1445 aa		13.22	□□□□□ -0.29
RNF31-222	ENST00000560631	SAMD9	Q5K651	1589 aa		13.19	□□□□□ -0.3
RNF31-222	ENST00000560631	UBTF	P17480	764 aa	Known RBP	13.17	□□□□□ -0.3
RNF31-222	ENST00000560631	UHRF1BP1L	A0JNW5	1464 aa		13.16	□□□□□ -0.3
RNF31-222	ENST00000560631	ADCY10	Q96PN6	1610 aa		13.16	□□□□□ -0.3
RNF31-222	ENST00000560631	UACA	Q9BZF9	1416 aa		13.14	□□□□□ -0.31
RNF31-222	ENST00000560631	EFCAB5	A4FU69	1503 aa		13.13	□□□□□ -0.31
RNF31-222	ENST00000560631	ABCC2	Q92887	1545 aa		13.12	□□□□□ -0.31
RNF31-222	ENST00000560631	ABCA8	O94911	1581 aa		13.11	□□□□□ -0.31
RNF31-222	ENST00000560631	NPM1	P06748	294 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
RNF31-222	ENST00000560631	MAPKBP1	O60336	1514 aa		13.09	□□□□□ -0.31
RNF31-222	ENST00000560631	KDM5B	Q9UGL1	1544 aa		13.09	□□□□□ -0.31
RNF31-222	ENST00000560631	KCNA4	P22459	653 aa		13.08	□□□□□ -0.32
RNF31-222	ENST00000560631	P3H3	Q8IVL6	736 aa		13.08	□□□□□ -0.32
RNF31-222	ENST00000560631	EHMT2	Q96KQ7	1210 aa		13.08	□□□□□ -0.32
RNF31-222	ENST00000560631	PLB1	Q6P1J6	1458 aa		13.08	□□□□□ -0.32
RNF31-222	ENST00000560631	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.08	□□□□□ -0.32
RNF31-222	ENST00000560631	ARHGAP35	Q9NRY4	1499 aa		13.07	□□□□□ -0.32
RNF31-222	ENST00000560631	FHOD3	Q2V2M9	1422 aa		13.06	□□□□□ -0.32
RNF31-222	ENST00000560631		U3KPZ7	1027 aa	Predicted RBP	13.05	□□□□□ -0.32
RNF31-222	ENST00000560631	RAPGEF6	Q8TEU7	1601 aa		13.04	□□□□□ -0.32
RNF31-222	ENST00000560631	RANGAP1	P46060	587 aa	Predicted RBP	13.03	□□□□□ -0.32
RNF31-222	ENST00000560631	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.02	□□□□□ -0.32
RNF31-222	ENST00000560631	KIF13A	Q9H1H9	1805 aa		13.02	□□□□□ -0.32
RNF31-222	ENST00000560631	FMN1	Q68DA7	1419 aa		13.02	□□□□□ -0.33
RNF31-222	ENST00000560631	ABCC10	Q5T3U5	1492 aa		13.02	□□□□□ -0.33
RNF31-222	ENST00000560631	TRH	P20396	242 aa	Predicted RBP	13.01	□□□□□ -0.33
RNF31-222	ENST00000560631	ATP10B	O94823	1461 aa		13	□□□□□ -0.33
RNF31-222	ENST00000560631	ASXL2	Q76L83	1435 aa		13	□□□□□ -0.33
RNF31-222	ENST00000560631	CLIP1	P30622	1438 aa		12.99	□□□□□ -0.33
RNF31-222	ENST00000560631	LOC105371045	A0A1W2PR82	267 aa		12.99	□□□□□ -0.33
RNF31-222	ENST00000560631	NUP153	P49790	1475 aa	Known RBP	12.98	□□□□□ -0.33
RNF31-222	ENST00000560631	DIP2B	Q9P265	1576 aa		12.98	□□□□□ -0.33
RNF31-222	ENST00000560631	GLI2	P10070	1586 aa		12.96	□□□□□ -0.33
RNF31-222	ENST00000560631	CEP162	Q5TB80	1403 aa		12.96	□□□□□ -0.34
RNF31-222	ENST00000560631	FAM69C	Q0P6D2	419 aa		12.95	□□□□□ -0.34
RNF31-222	ENST00000560631	WDR7	Q9Y4E6	1490 aa		12.95	□□□□□ -0.34
RNF31-222	ENST00000560631	EPRS	P07814	1512 aa	Known RBP	12.93	□□□□□ -0.34
RNF31-222	ENST00000560631	POTEH	Q6S545	545 aa		12.93	□□□□□ -0.34
RNF31-222	ENST00000560631	HECW1	Q76N89	1606 aa		12.92	□□□□□ -0.34
RNF31-222	ENST00000560631	CAPN15	O75808	1086 aa		12.92	□□□□□ -0.34
RNF31-222	ENST00000560631	CASKIN1	Q8WXD9	1431 aa		12.92	□□□□□ -0.34
RNF31-222	ENST00000560631	DSG3	P32926	999 aa		12.89	□□□□□ -0.35
RNF31-222	ENST00000560631	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.89	□□□□□ -0.35
RNF31-222	ENST00000560631	FYCO1	Q9BQS8	1478 aa		12.89	□□□□□ -0.35
RNF31-222	ENST00000560631	MAP3K4	Q9Y6R4	1608 aa		12.88	□□□□□ -0.35
RNF31-222	ENST00000560631	LRRIQ1	Q96JM4	1722 aa		12.88	□□□□□ -0.35
RNF31-222	ENST00000560631	PLEKHD1	A6NEE1	506 aa		12.88	□□□□□ -0.35
RNF31-222	ENST00000560631	SLC4A2	P04920	1241 aa		12.88	□□□□□ -0.35
RNF31-222	ENST00000560631	TSPOAP1	O95153	1857 aa		12.87	□□□□□ -0.35
RNF31-222	ENST00000560631	CFAP43	Q8NDM7	1665 aa		12.87	□□□□□ -0.35
RNF31-222	ENST00000560631	PCF11	O94913	1555 aa	Known RBP	12.87	□□□□□ -0.35
RNF31-222	ENST00000560631	ARID3C	A6NKF2	412 aa		12.87	□□□□□ -0.35
RNF31-222	ENST00000560631	CDK13	Q14004	1512 aa	Known RBP	12.87	□□□□□ -0.35
RNF31-222	ENST00000560631	PPRC1	Q5VV67	1664 aa	Known RBP	12.86	□□□□□ -0.35
RNF31-222	ENST00000560631	CCDC18	Q5T9S5	1454 aa		12.86	□□□□□ -0.35
RNF31-222	ENST00000560631	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.85	□□□□□ -0.35
RNF31-222	ENST00000560631	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms