RNA–Protein interactions for RNA: ENST00000560509.5

BLM-208, Transcript of Bloom syndrome RecQ like helicase, humanhuman

TSL 1 (best) BASIC

Gene BLM, Length 3,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLM-208ENST00000560509 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.79□□□□□ -1.48
BLM-208ENST00000560509 SCRIBQ14160 1630 aa5.78□□□□□ -1.48
BLM-208ENST00000560509 ARAP1Q96P48 1450 aa5.77□□□□□ -1.49
BLM-208ENST00000560509 NBR1Q14596 966 aa5.76□□□□□ -1.49
BLM-208ENST00000560509 WDR97A6NE52 1622 aa5.76□□□□□ -1.49
BLM-208ENST00000560509 PDIA4P13667 645 aaKnown RBP5.75□□□□□ -1.49
BLM-208ENST00000560509 FBXO3Q9UK99 471 aa5.75□□□□□ -1.49
BLM-208ENST00000560509 CACNB1Q02641 598 aaPredicted RBP5.75□□□□□ -1.49
BLM-208ENST00000560509 SAMD1Q6SPF0 538 aaPredicted RBP5.74□□□□□ -1.49
BLM-208ENST00000560509 SMARCA2P51531 1590 aa5.74□□□□□ -1.49
BLM-208ENST00000560509 HMGXB3Q12766 1538 aa5.73□□□□□ -1.49
BLM-208ENST00000560509 PPP4R3CPQ6ZMV5 832 aa5.72□□□□□ -1.49
BLM-208ENST00000560509 RSF1Q96T23 1441 aaPredicted RBP5.71□□□□□ -1.49
BLM-208ENST00000560509 NPM2Q86SE8 214 aaKnown RBP5.7□□□□□ -1.5
BLM-208ENST00000560509 FOXD4L1Q9NU39 408 aa5.7□□□□□ -1.5
BLM-208ENST00000560509 CHMP4AQ9BY43 222 aa5.69□□□□□ -1.5
BLM-208ENST00000560509 ADGRL1O94910 1474 aa5.69□□□□□ -1.5
BLM-208ENST00000560509 SLC34A2O95436 690 aa5.69□□□□□ -1.5
BLM-208ENST00000560509 DCAF8L1A6NGE4 600 aa5.68□□□□□ -1.5
BLM-208ENST00000560509 WDR62O43379 1518 aa5.67□□□□□ -1.5
BLM-208ENST00000560509 HMGB1P09429 215 aaKnown RBP5.67□□□□□ -1.5
BLM-208ENST00000560509 DHX37Q8IY37 1157 aaKnown RBP5.67□□□□□ -1.5
BLM-208ENST00000560509 PKNOX2Q96KN3 472 aa5.67□□□□□ -1.5
BLM-208ENST00000560509 BCL11BQ9C0K0 894 aaPredicted RBP5.66□□□□□ -1.5
BLM-208ENST00000560509 TRIM26Q12899 539 aaPredicted RBP5.66□□□□□ -1.5
BLM-208ENST00000560509 FGD1P98174 961 aa5.64□□□□□ -1.51
BLM-208ENST00000560509 PDE4CQ08493 712 aa5.64□□□□□ -1.51
BLM-208ENST00000560509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.64□□□□□ -1.51
BLM-208ENST00000560509 HOXD11P31277 338 aaPredicted RBP5.63□□□□□ -1.51
BLM-208ENST00000560509 TMEM132AQ24JP5 1023 aa5.63□□□□□ -1.51
BLM-208ENST00000560509 PDS5BQ9NTI5 1447 aa5.63□□□□□ -1.51
BLM-208ENST00000560509 MROH2BQ7Z745 1585 aa5.62□□□□□ -1.51
BLM-208ENST00000560509 RNF39Q9H2S5 420 aa5.61□□□□□ -1.51
BLM-208ENST00000560509 LAMC3Q9Y6N6 1575 aa5.61□□□□□ -1.51
BLM-208ENST00000560509 WIZO95785 1651 aa5.6□□□□□ -1.51
BLM-208ENST00000560509 CFAP44Q96MT7 982 aa5.58□□□□□ -1.52
BLM-208ENST00000560509 KDM6BO15054 1643 aa5.58□□□□□ -1.52
BLM-208ENST00000560509 NESP48681 1621 aa5.57□□□□□ -1.52
BLM-208ENST00000560509 IGSF3O75054 1194 aa5.57□□□□□ -1.52
BLM-208ENST00000560509 SALL2Q9Y467 1007 aaPredicted RBP5.57□□□□□ -1.52
BLM-208ENST00000560509 NPM3O75607 178 aaKnown RBP5.57□□□□□ -1.52
BLM-208ENST00000560509 CNKSR2Q8WXI2 1034 aa5.57□□□□□ -1.52
BLM-208ENST00000560509 KIF21AQ7Z4S6 1674 aa5.56□□□□□ -1.52
BLM-208ENST00000560509 MRC2Q9UBG0 1479 aa5.56□□□□□ -1.52
BLM-208ENST00000560509 RNF216Q9NWF9 866 aaPredicted RBP5.55□□□□□ -1.52
BLM-208ENST00000560509 PAXIP1Q6ZW49 1069 aaPredicted RBP5.55□□□□□ -1.52
BLM-208ENST00000560509 UBTFP17480 764 aaKnown RBP5.54□□□□□ -1.52
BLM-208ENST00000560509 TOP2BQ02880 1626 aa5.54□□□□□ -1.52
BLM-208ENST00000560509 AAMPQ13685 434 aa5.54□□□□□ -1.52
BLM-208ENST00000560509 ANP32EQ9BTT0 268 aa5.54□□□□□ -1.52
BLM-208ENST00000560509 ZBTB22O15209 634 aa5.53□□□□□ -1.52
BLM-208ENST00000560509 C1QBPQ07021 282 aaKnown RBP5.52□□□□□ -1.53
BLM-208ENST00000560509 CCDC9Q9Y3X0 531 aaKnown RBP5.52□□□□□ -1.53
BLM-208ENST00000560509 KIF13AQ9H1H9 1805 aa5.52□□□□□ -1.53
BLM-208ENST00000560509 ZBTB7CA1YPR0 619 aa5.52□□□□□ -1.53
BLM-208ENST00000560509 SMARCA4P51532 1647 aa5.51□□□□□ -1.53
BLM-208ENST00000560509 TAF7LQ5H9L4 462 aa5.51□□□□□ -1.53
BLM-208ENST00000560509 PPARGC1BQ86YN6 1023 aaKnown RBP5.51□□□□□ -1.53
BLM-208ENST00000560509 TOP2AP11388 1531 aaKnown RBP5.51□□□□□ -1.53
BLM-208ENST00000560509 BBXQ8WY36 941 aaPredicted RBP5.51□□□□□ -1.53
BLM-208ENST00000560509 RSPH6AQ9H0K4 717 aa5.5□□□□□ -1.53
BLM-208ENST00000560509 CDK11AQ9UQ88 783 aaPredicted RBP5.5□□□□□ -1.53
BLM-208ENST00000560509 SENP3-EIF4A1A0A087X0R7 540 aa5.5□□□□□ -1.53
BLM-208ENST00000560509 NCAPD3P42695 1498 aa5.5□□□□□ -1.53
BLM-208ENST00000560509 RSPH4AQ5TD94 716 aa5.49□□□□□ -1.53
BLM-208ENST00000560509 CCDC136Q96JN2 1154 aa5.49□□□□□ -1.53
BLM-208ENST00000560509 CDK11BP21127 795 aaKnown RBP5.48□□□□□ -1.53
BLM-208ENST00000560509 MED1Q15648 1581 aaPredicted RBP5.48□□□□□ -1.53
BLM-208ENST00000560509 FAM69CQ0P6D2 419 aa5.48□□□□□ -1.53
BLM-208ENST00000560509 SPRYD3Q8NCJ5 442 aa5.48□□□□□ -1.53
BLM-208ENST00000560509 SHROOM2Q13796 1616 aa5.48□□□□□ -1.53
BLM-208ENST00000560509 CLASP1Q7Z460 1538 aa5.48□□□□□ -1.53
BLM-208ENST00000560509 RBM33Q96EV2 1170 aaKnown RBP5.48□□□□□ -1.53
BLM-208ENST00000560509 PCGF6Q9BYE7 350 aa5.48□□□□□ -1.53
BLM-208ENST00000560509 BRD2P25440 801 aaKnown RBP5.47□□□□□ -1.53
BLM-208ENST00000560509 ATXN8OSP0DMR3 200 aa5.46□□□□□ -1.53
BLM-208ENST00000560509 CCDC88BA6NC98 1476 aa5.46□□□□□ -1.54
BLM-208ENST00000560509 CENPBP07199 599 aaPredicted RBP5.46□□□□□ -1.54
BLM-208ENST00000560509 BAZ1BQ9UIG0 1483 aaKnown RBP5.45□□□□□ -1.54
BLM-208ENST00000560509 FBLN2P98095 1184 aa5.45□□□□□ -1.54
BLM-208ENST00000560509 IRX6P78412 446 aaPredicted RBP5.44□□□□□ -1.54
BLM-208ENST00000560509 LTBP4Q8N2S1 1624 aa5.44□□□□□ -1.54
BLM-208ENST00000560509 KDM2AQ9Y2K7 1162 aa5.43□□□□□ -1.54
BLM-208ENST00000560509 ATAD2BQ9ULI0 1458 aa5.43□□□□□ -1.54
BLM-208ENST00000560509 WRNQ14191 1432 aaPredicted RBP eCLIP5.43□□□□□ -1.54
BLM-208ENST00000560509 ABCC8Q09428 1581 aa5.42□□□□□ -1.54
BLM-208ENST00000560509 IQSEC2Q5JU85 1478 aa5.42□□□□□ -1.54
BLM-208ENST00000560509 NPM1P06748 294 aaKnown RBP eCLIP5.42□□□□□ -1.54
BLM-208ENST00000560509 PCF11O94913 1555 aaKnown RBP5.41□□□□□ -1.54
BLM-208ENST00000560509 UBAP1LF5GYI3 381 aa5.4□□□□□ -1.54
BLM-208ENST00000560509 RBM10P98175 930 aaKnown RBP5.4□□□□□ -1.54
BLM-208ENST00000560509 GAPVD1Q14C86 1478 aa5.4□□□□□ -1.54
BLM-208ENST00000560509 NEFLP07196 543 aa5.4□□□□□ -1.55
BLM-208ENST00000560509 PPRC1Q5VV67 1664 aaKnown RBP5.39□□□□□ -1.55
BLM-208ENST00000560509 YY1P25490 414 aa5.39□□□□□ -1.55
BLM-208ENST00000560509 CHMP7Q8WUX9 453 aaPredicted RBP5.38□□□□□ -1.55
BLM-208ENST00000560509 CEP164Q9UPV0 1460 aa5.38□□□□□ -1.55
BLM-208ENST00000560509 RUSC2Q8N2Y8 1516 aa5.38□□□□□ -1.55
BLM-208ENST00000560509 HSP90B1P14625 803 aaKnown RBP5.38□□□□□ -1.55
BLM-208ENST00000560509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms