RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 KIAA0586Q9BVV6 1533 aa25.18■■□□□ 1.62
PSME1-207ENST00000560420 JPH4Q96JJ6 628 aa25.13■■□□□ 1.61
PSME1-207ENST00000560420 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
PSME1-207ENST00000560420 RAPGEF2Q9Y4G8 1499 aa25.07■■□□□ 1.6
PSME1-207ENST00000560420 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
PSME1-207ENST00000560420 IQGAP2Q13576 1575 aa25■■□□□ 1.59
PSME1-207ENST00000560420 UGGT2Q9NYU1 1516 aa24.91■■□□□ 1.58
PSME1-207ENST00000560420 DISP1Q96F81 1524 aa24.89■■□□□ 1.57
PSME1-207ENST00000560420 EEA1Q15075 1411 aa24.86■■□□□ 1.57
PSME1-207ENST00000560420 CTTNBP2Q8WZ74 1663 aa24.86■■□□□ 1.57
PSME1-207ENST00000560420 ADCY10Q96PN6 1610 aa24.86■■□□□ 1.57
PSME1-207ENST00000560420 CARMIL2Q6F5E8 1435 aa24.83■■□□□ 1.57
PSME1-207ENST00000560420 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
PSME1-207ENST00000560420 CHIC1Q5VXU3 224 aa24.8■■□□□ 1.56
PSME1-207ENST00000560420 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
PSME1-207ENST00000560420 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
PSME1-207ENST00000560420 PTPRGP23470 1445 aa24.78■■□□□ 1.56
PSME1-207ENST00000560420 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
PSME1-207ENST00000560420 MAPKBP1O60336 1514 aa24.75■■□□□ 1.55
PSME1-207ENST00000560420 UHRF1BP1LA0JNW5 1464 aa24.71■■□□□ 1.55
PSME1-207ENST00000560420 KIF21BO75037 1637 aa24.68■■□□□ 1.54
PSME1-207ENST00000560420 KIF13AQ9H1H9 1805 aa24.66■■□□□ 1.54
PSME1-207ENST00000560420 ABCC2Q92887 1545 aa24.66■■□□□ 1.54
PSME1-207ENST00000560420 GOLGA3Q08378 1498 aa24.65■■□□□ 1.54
PSME1-207ENST00000560420 UACAQ9BZF9 1416 aa24.65■■□□□ 1.54
PSME1-207ENST00000560420 ABCC10Q5T3U5 1492 aa24.64■■□□□ 1.53
PSME1-207ENST00000560420 DIP2BQ9P265 1576 aa24.61■■□□□ 1.53
PSME1-207ENST00000560420 SAMD9Q5K651 1589 aa24.6■■□□□ 1.53
PSME1-207ENST00000560420 KDM5BQ9UGL1 1544 aa24.59■■□□□ 1.53
PSME1-207ENST00000560420 ABCA8O94911 1581 aa24.57■■□□□ 1.52
PSME1-207ENST00000560420 NPM1P06748 294 aaKnown RBP eCLIP24.56■■□□□ 1.52
PSME1-207ENST00000560420 PLB1Q6P1J6 1458 aa24.54■■□□□ 1.52
PSME1-207ENST00000560420 FAM9AQ8IZU1 332 aaPredicted RBP24.54■■□□□ 1.52
PSME1-207ENST00000560420 TTBK1Q5TCY1 1321 aaPredicted RBP24.53■■□□□ 1.52
PSME1-207ENST00000560420 ZCCHC11Q5TAX3 1644 aaKnown RBP24.5■■□□□ 1.51
PSME1-207ENST00000560420 ASXL2Q76L83 1435 aa24.49■■□□□ 1.51
PSME1-207ENST00000560420 FAM69CQ0P6D2 419 aa24.45■■□□□ 1.5
PSME1-207ENST00000560420 GLI2P10070 1586 aa24.45■■□□□ 1.5
PSME1-207ENST00000560420 EFCAB5A4FU69 1503 aa24.4■■□□□ 1.5
PSME1-207ENST00000560420 EPRSP07814 1512 aaKnown RBP24.38■■□□□ 1.49
PSME1-207ENST00000560420 WDR7Q9Y4E6 1490 aa24.35■■□□□ 1.49
PSME1-207ENST00000560420 P3H3Q8IVL6 736 aa24.35■■□□□ 1.49
PSME1-207ENST00000560420 FHOD3Q2V2M9 1422 aa24.35■■□□□ 1.49
PSME1-207ENST00000560420 PPRC1Q5VV67 1664 aaKnown RBP24.34■■□□□ 1.49
PSME1-207ENST00000560420 RAPGEF6Q8TEU7 1601 aa24.33■■□□□ 1.49
PSME1-207ENST00000560420 ATP10BO94823 1461 aa24.32■■□□□ 1.48
PSME1-207ENST00000560420 MAP3K4Q9Y6R4 1608 aa24.32■■□□□ 1.48
PSME1-207ENST00000560420 NUP153P49790 1475 aaKnown RBP24.29■■□□□ 1.48
PSME1-207ENST00000560420 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
PSME1-207ENST00000560420 TSPOAP1O95153 1857 aa24.26■■□□□ 1.47
PSME1-207ENST00000560420 UBTFP17480 764 aaKnown RBP24.23■■□□□ 1.47
PSME1-207ENST00000560420 RANGAP1P46060 587 aaPredicted RBP24.2■■□□□ 1.46
PSME1-207ENST00000560420 KDM6BO15054 1643 aa24.18■■□□□ 1.46
PSME1-207ENST00000560420 CFAP43Q8NDM7 1665 aa24.18■■□□□ 1.46
PSME1-207ENST00000560420 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
PSME1-207ENST00000560420 MAGI3Q5TCQ9 1506 aa24.15■■□□□ 1.46
PSME1-207ENST00000560420 TEX14Q8IWB6 1497 aa24.13■■□□□ 1.45
PSME1-207ENST00000560420 FMN1Q68DA7 1419 aa24.12■■□□□ 1.45
PSME1-207ENST00000560420 ABCA9Q8IUA7 1624 aa24.12■■□□□ 1.45
PSME1-207ENST00000560420 ARID3CA6NKF2 412 aa24.11■■□□□ 1.45
PSME1-207ENST00000560420 COL17A1Q9UMD9 1497 aaPredicted RBP24.11■■□□□ 1.45
PSME1-207ENST00000560420 CD109Q6YHK3 1445 aa24.1■■□□□ 1.45
PSME1-207ENST00000560420 HECW1Q76N89 1606 aa24.06■■□□□ 1.44
PSME1-207ENST00000560420 KCNH8Q96L42 1107 aa24.05■■□□□ 1.44
PSME1-207ENST00000560420 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
PSME1-207ENST00000560420 LRRIQ1Q96JM4 1722 aa23.99■■□□□ 1.43
PSME1-207ENST00000560420 PCF11O94913 1555 aaKnown RBP23.97■■□□□ 1.43
PSME1-207ENST00000560420 CLIP1P30622 1438 aa23.97■■□□□ 1.43
PSME1-207ENST00000560420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.96■■□□□ 1.43
PSME1-207ENST00000560420 CASKIN1Q8WXD9 1431 aa23.96■■□□□ 1.43
PSME1-207ENST00000560420 ARAP3Q8WWN8 1544 aa23.94■■□□□ 1.42
PSME1-207ENST00000560420 PLEKHD1A6NEE1 506 aa23.94■■□□□ 1.42
PSME1-207ENST00000560420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.94■■□□□ 1.42
PSME1-207ENST00000560420 HNRNPUL2Q1KMD3 747 aaKnown RBP23.94■■□□□ 1.42
PSME1-207ENST00000560420 TTC37Q6PGP7 1564 aa23.93■■□□□ 1.42
PSME1-207ENST00000560420 NEO1Q92859 1461 aa23.91■■□□□ 1.42
PSME1-207ENST00000560420 PHLDB1Q86UU1 1377 aa23.9■■□□□ 1.42
PSME1-207ENST00000560420 FYCO1Q9BQS8 1478 aa23.89■■□□□ 1.42
PSME1-207ENST00000560420 TROQ12816 1431 aaPredicted RBP23.86■■□□□ 1.41
PSME1-207ENST00000560420 CCDC18Q5T9S5 1454 aa23.86■■□□□ 1.41
PSME1-207ENST00000560420 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
PSME1-207ENST00000560420 KIF14Q15058 1648 aa23.84■■□□□ 1.41
PSME1-207ENST00000560420 FRMPD1Q5SYB0 1578 aa23.83■■□□□ 1.41
PSME1-207ENST00000560420 CFAP74Q9C0B2 1584 aa23.8■■□□□ 1.4
PSME1-207ENST00000560420 PLCH2O75038 1416 aa23.79■■□□□ 1.4
PSME1-207ENST00000560420 FANCAO15360 1455 aa23.79■■□□□ 1.4
PSME1-207ENST00000560420 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
PSME1-207ENST00000560420 CDK11AQ9UQ88 783 aaPredicted RBP23.77■■□□□ 1.4
PSME1-207ENST00000560420 AKNAQ7Z591 1439 aa23.76■■□□□ 1.39
PSME1-207ENST00000560420 RICTORQ6R327 1708 aa23.74■■□□□ 1.39
PSME1-207ENST00000560420 MYO5CQ9NQX4 1742 aa23.74■■□□□ 1.39
PSME1-207ENST00000560420 KDM4FA0A1W2PPD8 638 aa23.74■■□□□ 1.39
PSME1-207ENST00000560420 LOC105371045A0A1W2PR82 267 aa23.71■■□□□ 1.39
PSME1-207ENST00000560420 DENND4BO75064 1496 aaPredicted RBP23.69■■□□□ 1.38
PSME1-207ENST00000560420 RAPGEF3O95398 923 aa23.69■■□□□ 1.38
PSME1-207ENST00000560420 ZMYM4Q5VZL5 1548 aa23.69■■□□□ 1.38
PSME1-207ENST00000560420 ADGRL1O94910 1474 aa23.68■■□□□ 1.38
PSME1-207ENST00000560420 PREX2Q70Z35 1606 aa23.66■■□□□ 1.38
PSME1-207ENST00000560420 CDC42BPBQ9Y5S2 1711 aa23.66■■□□□ 1.38
PSME1-207ENST00000560420 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms