RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
CRTC3-209ENST00000560320 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
CRTC3-209ENST00000560320 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.28
CRTC3-209ENST00000560320 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.28
CRTC3-209ENST00000560320 CLIP1P30622 1438 aa16.77■□□□□ 0.27
CRTC3-209ENST00000560320 ADAMTS12P58397 1594 aa16.73■□□□□ 0.27
CRTC3-209ENST00000560320 FHAD1B1AJZ9 1412 aa16.73■□□□□ 0.27
CRTC3-209ENST00000560320 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
CRTC3-209ENST00000560320 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
CRTC3-209ENST00000560320 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
CRTC3-209ENST00000560320 CLASP1Q7Z460 1538 aa16.64■□□□□ 0.25
CRTC3-209ENST00000560320 FBLN2P98095 1184 aa16.62■□□□□ 0.25
CRTC3-209ENST00000560320 VPS8Q8N3P4 1428 aa16.61■□□□□ 0.25
CRTC3-209ENST00000560320 EFCAB5A4FU69 1503 aa16.6■□□□□ 0.25
CRTC3-209ENST00000560320 SYNJ2O15056 1496 aa16.59■□□□□ 0.25
CRTC3-209ENST00000560320 GRIN2AQ12879 1464 aa16.57■□□□□ 0.24
CRTC3-209ENST00000560320 ARHGAP35Q9NRY4 1499 aa16.57■□□□□ 0.24
CRTC3-209ENST00000560320 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
CRTC3-209ENST00000560320 APLP2Q06481 763 aa16.56■□□□□ 0.24
CRTC3-209ENST00000560320 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
CRTC3-209ENST00000560320 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
CRTC3-209ENST00000560320 KIF13AQ9H1H9 1805 aa16.5■□□□□ 0.23
CRTC3-209ENST00000560320 KIAA0586Q9BVV6 1533 aa16.5■□□□□ 0.23
CRTC3-209ENST00000560320 SAMD9Q5K651 1589 aa16.49■□□□□ 0.23
CRTC3-209ENST00000560320 TRIM26Q12899 539 aaPredicted RBP16.48■□□□□ 0.23
CRTC3-209ENST00000560320 P3H3Q8IVL6 736 aa16.45■□□□□ 0.22
CRTC3-209ENST00000560320 CEP170Q5SW79 1584 aa16.45■□□□□ 0.22
CRTC3-209ENST00000560320 UGGT2Q9NYU1 1516 aa16.45■□□□□ 0.22
CRTC3-209ENST00000560320 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
CRTC3-209ENST00000560320 FMN1Q68DA7 1419 aa16.44■□□□□ 0.22
CRTC3-209ENST00000560320 NUP160Q12769 1436 aa16.43■□□□□ 0.22
CRTC3-209ENST00000560320 PPARGC1BQ86YN6 1023 aaKnown RBP16.42■□□□□ 0.22
CRTC3-209ENST00000560320 ERCC6L2Q5T890 1561 aa16.4■□□□□ 0.22
CRTC3-209ENST00000560320 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
CRTC3-209ENST00000560320 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
CRTC3-209ENST00000560320 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
CRTC3-209ENST00000560320 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
CRTC3-209ENST00000560320 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
CRTC3-209ENST00000560320 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
CRTC3-209ENST00000560320 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
CRTC3-209ENST00000560320 ATP1B4Q9UN42 357 aaPredicted RBP16.35■□□□□ 0.21
CRTC3-209ENST00000560320 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
CRTC3-209ENST00000560320 TTBK1Q5TCY1 1321 aaPredicted RBP16.34■□□□□ 0.21
CRTC3-209ENST00000560320 TIAM1Q13009 1591 aa16.33■□□□□ 0.2
CRTC3-209ENST00000560320 HECW2Q9P2P5 1572 aa16.33■□□□□ 0.2
CRTC3-209ENST00000560320 JPH4Q96JJ6 628 aa16.32■□□□□ 0.2
CRTC3-209ENST00000560320 HECW1Q76N89 1606 aa16.3■□□□□ 0.2
CRTC3-209ENST00000560320 DISP1Q96F81 1524 aa16.3■□□□□ 0.2
CRTC3-209ENST00000560320 FBXO41Q8TF61 875 aa16.3■□□□□ 0.2
CRTC3-209ENST00000560320 KDM6BO15054 1643 aa16.28■□□□□ 0.2
CRTC3-209ENST00000560320 CCDC18Q5T9S5 1454 aa16.25■□□□□ 0.19
CRTC3-209ENST00000560320 SHROOM2Q13796 1616 aa16.24■□□□□ 0.19
CRTC3-209ENST00000560320 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
CRTC3-209ENST00000560320 LRRC9Q6ZRR7 1453 aa16.22■□□□□ 0.19
CRTC3-209ENST00000560320 LMTK3Q96Q04 1460 aa16.22■□□□□ 0.19
CRTC3-209ENST00000560320 LRRIQ1Q96JM4 1722 aa16.22■□□□□ 0.19
CRTC3-209ENST00000560320 PRG4Q92954 1404 aaPredicted RBP16.22■□□□□ 0.19
CRTC3-209ENST00000560320 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.19
CRTC3-209ENST00000560320 ABCC10Q5T3U5 1492 aa16.19■□□□□ 0.18
CRTC3-209ENST00000560320 ADGRL1O94910 1474 aa16.18■□□□□ 0.18
CRTC3-209ENST00000560320 MTUS2Q5JR59 1369 aa16.17■□□□□ 0.18
CRTC3-209ENST00000560320 EPRSP07814 1512 aaKnown RBP16.16■□□□□ 0.18
CRTC3-209ENST00000560320 FAM69CQ0P6D2 419 aa16.16■□□□□ 0.18
CRTC3-209ENST00000560320 DIP2BQ9P265 1576 aa16.16■□□□□ 0.18
CRTC3-209ENST00000560320 EHBP1L1Q8N3D4 1523 aa16.15■□□□□ 0.18
CRTC3-209ENST00000560320 SUPT6HQ7KZ85 1726 aaKnown RBP16.15■□□□□ 0.18
CRTC3-209ENST00000560320 PTPRGP23470 1445 aa16.13■□□□□ 0.17
CRTC3-209ENST00000560320 CDK11AQ9UQ88 783 aaPredicted RBP16.12■□□□□ 0.17
CRTC3-209ENST00000560320 ABCA8O94911 1581 aa16.12■□□□□ 0.17
CRTC3-209ENST00000560320 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
CRTC3-209ENST00000560320 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
CRTC3-209ENST00000560320 CDK13Q14004 1512 aaKnown RBP16.1■□□□□ 0.17
CRTC3-209ENST00000560320 TSPOAP1O95153 1857 aa16.1■□□□□ 0.17
CRTC3-209ENST00000560320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
CRTC3-209ENST00000560320 SOCS7O14512 581 aa16.1■□□□□ 0.17
CRTC3-209ENST00000560320 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
CRTC3-209ENST00000560320 MAPKBP1O60336 1514 aa16.09■□□□□ 0.17
CRTC3-209ENST00000560320 RRBP1Q9P2E9 1410 aaKnown RBP16.08■□□□□ 0.16
CRTC3-209ENST00000560320 CCNB3Q8WWL7 1395 aa16.05■□□□□ 0.16
CRTC3-209ENST00000560320 ARID3CA6NKF2 412 aa16.05■□□□□ 0.16
CRTC3-209ENST00000560320 UACAQ9BZF9 1416 aa16.04■□□□□ 0.16
CRTC3-209ENST00000560320 NCOA2Q15596 1464 aa16.03■□□□□ 0.16
CRTC3-209ENST00000560320 PHLDB1Q86UU1 1377 aa16.02■□□□□ 0.16
CRTC3-209ENST00000560320 ILDR2Q71H61 639 aa16.02■□□□□ 0.16
CRTC3-209ENST00000560320 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
CRTC3-209ENST00000560320 ABCC2Q92887 1545 aa16■□□□□ 0.15
CRTC3-209ENST00000560320 TROQ12816 1431 aaPredicted RBP16■□□□□ 0.15
CRTC3-209ENST00000560320 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
CRTC3-209ENST00000560320 ATP10BO94823 1461 aa15.98■□□□□ 0.15
CRTC3-209ENST00000560320 ADCY10Q96PN6 1610 aa15.98■□□□□ 0.15
CRTC3-209ENST00000560320 PLEKHD1A6NEE1 506 aa15.98■□□□□ 0.15
CRTC3-209ENST00000560320 FAM50AQ14320 339 aaKnown RBP15.98■□□□□ 0.15
CRTC3-209ENST00000560320 FGD6Q6ZV73 1430 aa15.97■□□□□ 0.15
CRTC3-209ENST00000560320 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
CRTC3-209ENST00000560320 ITSN2Q9NZM3 1697 aa15.96■□□□□ 0.15
CRTC3-209ENST00000560320 KIF14Q15058 1648 aa15.96■□□□□ 0.15
CRTC3-209ENST00000560320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.96■□□□□ 0.15
CRTC3-209ENST00000560320 PTPN23Q9H3S7 1636 aa15.94■□□□□ 0.14
CRTC3-209ENST00000560320 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
CRTC3-209ENST00000560320 ZCCHC11Q5TAX3 1644 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms