RNA–Protein interactions for RNA: ENST00000559591.5

KNSTRN-207, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-207ENST00000559591 ABCC10Q5T3U5 1492 aa18.72■□□□□ 0.59
KNSTRN-207ENST00000559591 MAGI1Q96QZ7 1491 aaPredicted RBP18.72■□□□□ 0.59
KNSTRN-207ENST00000559591 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
KNSTRN-207ENST00000559591 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
KNSTRN-207ENST00000559591 DIP2BQ9P265 1576 aa18.64■□□□□ 0.57
KNSTRN-207ENST00000559591 TSPOAP1O95153 1857 aa18.59■□□□□ 0.57
KNSTRN-207ENST00000559591 WDR97A6NE52 1622 aa18.59■□□□□ 0.57
KNSTRN-207ENST00000559591 GRIN2BQ13224 1484 aa18.58■□□□□ 0.56
KNSTRN-207ENST00000559591 CEP170Q5SW79 1584 aa18.56■□□□□ 0.56
KNSTRN-207ENST00000559591 SOGA1O94964 1423 aa18.56■□□□□ 0.56
KNSTRN-207ENST00000559591 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
KNSTRN-207ENST00000559591 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
KNSTRN-207ENST00000559591 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
KNSTRN-207ENST00000559591 HOXD11P31277 338 aaPredicted RBP18.49■□□□□ 0.55
KNSTRN-207ENST00000559591 RNF39Q9H2S5 420 aa18.49■□□□□ 0.55
KNSTRN-207ENST00000559591 SPATA31D1Q6ZQQ2 1576 aa18.48■□□□□ 0.55
KNSTRN-207ENST00000559591 NPM1P06748 294 aaKnown RBP eCLIP18.47■□□□□ 0.55
KNSTRN-207ENST00000559591 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
KNSTRN-207ENST00000559591 SHROOM2Q13796 1616 aa18.4■□□□□ 0.54
KNSTRN-207ENST00000559591 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
KNSTRN-207ENST00000559591 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
KNSTRN-207ENST00000559591 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
KNSTRN-207ENST00000559591 NUP160Q12769 1436 aa18.32■□□□□ 0.52
KNSTRN-207ENST00000559591 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
KNSTRN-207ENST00000559591 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
KNSTRN-207ENST00000559591 ADCY10Q96PN6 1610 aa18.3■□□□□ 0.52
KNSTRN-207ENST00000559591 CERKQ8TCT0 537 aa18.29■□□□□ 0.52
KNSTRN-207ENST00000559591 PRG4Q92954 1404 aaPredicted RBP18.29■□□□□ 0.52
KNSTRN-207ENST00000559591 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
KNSTRN-207ENST00000559591 COL17A1Q9UMD9 1497 aaPredicted RBP18.26■□□□□ 0.51
KNSTRN-207ENST00000559591 RNF216Q9NWF9 866 aaPredicted RBP18.25■□□□□ 0.51
KNSTRN-207ENST00000559591 C1QBPQ07021 282 aaKnown RBP18.23■□□□□ 0.51
KNSTRN-207ENST00000559591 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
KNSTRN-207ENST00000559591 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
KNSTRN-207ENST00000559591 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
KNSTRN-207ENST00000559591 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
KNSTRN-207ENST00000559591 GLI2P10070 1586 aa18.1■□□□□ 0.49
KNSTRN-207ENST00000559591 CUX1P39880 1505 aa18.09■□□□□ 0.49
KNSTRN-207ENST00000559591 PTPRMP28827 1452 aa18.08■□□□□ 0.49
KNSTRN-207ENST00000559591 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
KNSTRN-207ENST00000559591 TEX14Q8IWB6 1497 aa18.03■□□□□ 0.48
KNSTRN-207ENST00000559591 KIF21BO75037 1637 aa18.03■□□□□ 0.48
KNSTRN-207ENST00000559591 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
KNSTRN-207ENST00000559591 ASXL2Q76L83 1435 aa18.01■□□□□ 0.47
KNSTRN-207ENST00000559591 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
KNSTRN-207ENST00000559591 HSPA2P54652 639 aa17.97■□□□□ 0.47
KNSTRN-207ENST00000559591 MAP3K4Q9Y6R4 1608 aa17.97■□□□□ 0.47
KNSTRN-207ENST00000559591 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
KNSTRN-207ENST00000559591 ADAMTSL3P82987 1691 aa17.93■□□□□ 0.46
KNSTRN-207ENST00000559591 ABCC2Q92887 1545 aa17.9■□□□□ 0.46
KNSTRN-207ENST00000559591 EPRSP07814 1512 aaKnown RBP17.88■□□□□ 0.45
KNSTRN-207ENST00000559591 KIAA0586Q9BVV6 1533 aa17.85■□□□□ 0.45
KNSTRN-207ENST00000559591 CUL7Q14999 1698 aa17.83■□□□□ 0.44
KNSTRN-207ENST00000559591 TTBK1Q5TCY1 1321 aaPredicted RBP17.81■□□□□ 0.44
KNSTRN-207ENST00000559591 MADDQ8WXG6 1647 aa17.81■□□□□ 0.44
KNSTRN-207ENST00000559591 PTPRGP23470 1445 aa17.79■□□□□ 0.44
KNSTRN-207ENST00000559591 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
KNSTRN-207ENST00000559591 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
KNSTRN-207ENST00000559591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.43
KNSTRN-207ENST00000559591 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
KNSTRN-207ENST00000559591 RIMS1Q86UR5 1692 aaKnown RBP17.71■□□□□ 0.42
KNSTRN-207ENST00000559591 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
KNSTRN-207ENST00000559591 MED1Q15648 1581 aaPredicted RBP17.67■□□□□ 0.42
KNSTRN-207ENST00000559591 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
KNSTRN-207ENST00000559591 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
KNSTRN-207ENST00000559591 MAGI3Q5TCQ9 1506 aa17.67■□□□□ 0.42
KNSTRN-207ENST00000559591 CD109Q6YHK3 1445 aa17.64■□□□□ 0.41
KNSTRN-207ENST00000559591 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
KNSTRN-207ENST00000559591 UACAQ9BZF9 1416 aa17.61■□□□□ 0.41
KNSTRN-207ENST00000559591 YEATS2Q9ULM3 1422 aa17.61■□□□□ 0.41
KNSTRN-207ENST00000559591 IQSEC2Q5JU85 1478 aa17.61■□□□□ 0.41
KNSTRN-207ENST00000559591 KDM5BQ9UGL1 1544 aa17.61■□□□□ 0.41
KNSTRN-207ENST00000559591 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
KNSTRN-207ENST00000559591 WDR7Q9Y4E6 1490 aa17.58■□□□□ 0.41
KNSTRN-207ENST00000559591 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.4
KNSTRN-207ENST00000559591 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
KNSTRN-207ENST00000559591 STRCQ7RTU9 1775 aa17.56■□□□□ 0.4
KNSTRN-207ENST00000559591 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
KNSTRN-207ENST00000559591 LTBP4Q8N2S1 1624 aa17.54■□□□□ 0.4
KNSTRN-207ENST00000559591 UBAP1LF5GYI3 381 aa17.5■□□□□ 0.39
KNSTRN-207ENST00000559591 PREX1Q8TCU6 1659 aa17.47■□□□□ 0.39
KNSTRN-207ENST00000559591 KCNH8Q96L42 1107 aa17.46■□□□□ 0.39
KNSTRN-207ENST00000559591 PTPRTO14522 1441 aa17.46■□□□□ 0.39
KNSTRN-207ENST00000559591 RAPGEF3O95398 923 aa17.45■□□□□ 0.38
KNSTRN-207ENST00000559591 HSPA1LP34931 641 aa17.39■□□□□ 0.37
KNSTRN-207ENST00000559591 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
KNSTRN-207ENST00000559591 POGZQ7Z3K3 1410 aa17.38■□□□□ 0.37
KNSTRN-207ENST00000559591 TTC37Q6PGP7 1564 aa17.38■□□□□ 0.37
KNSTRN-207ENST00000559591 ARHGEF40Q8TER5 1519 aa17.37■□□□□ 0.37
KNSTRN-207ENST00000559591 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
KNSTRN-207ENST00000559591 FRMPD1Q5SYB0 1578 aa17.36■□□□□ 0.37
KNSTRN-207ENST00000559591 FER1L4A9Z1Z3 1794 aa17.35■□□□□ 0.37
KNSTRN-207ENST00000559591 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
KNSTRN-207ENST00000559591 FANCAO15360 1455 aa17.34■□□□□ 0.37
KNSTRN-207ENST00000559591 UHRF1BP1Q6BDS2 1440 aa17.33■□□□□ 0.36
KNSTRN-207ENST00000559591 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
KNSTRN-207ENST00000559591 HRCP23327 699 aa17.31■□□□□ 0.36
KNSTRN-207ENST00000559591 MLECQ14165 292 aa17.31■□□□□ 0.36
KNSTRN-207ENST00000559591 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
KNSTRN-207ENST00000559591 IQGAP2Q13576 1575 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms