RNA–Protein interactions for RNA: ENST00000559304.5

KNSTRN-206, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-206ENST00000559304 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
KNSTRN-206ENST00000559304 GRIN2BQ13224 1484 aa18.58■□□□□ 0.56
KNSTRN-206ENST00000559304 CEP170Q5SW79 1584 aa18.56■□□□□ 0.56
KNSTRN-206ENST00000559304 SOGA1O94964 1423 aa18.56■□□□□ 0.56
KNSTRN-206ENST00000559304 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
KNSTRN-206ENST00000559304 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
KNSTRN-206ENST00000559304 SPATA31D1Q6ZQQ2 1576 aa18.48■□□□□ 0.55
KNSTRN-206ENST00000559304 ADRA2BP18089 450 aa18.48■□□□□ 0.55
KNSTRN-206ENST00000559304 NPM1P06748 294 aaKnown RBP eCLIP18.47■□□□□ 0.55
KNSTRN-206ENST00000559304 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
KNSTRN-206ENST00000559304 SHROOM2Q13796 1616 aa18.4■□□□□ 0.54
KNSTRN-206ENST00000559304 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
KNSTRN-206ENST00000559304 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
KNSTRN-206ENST00000559304 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
KNSTRN-206ENST00000559304 NUP160Q12769 1436 aa18.32■□□□□ 0.52
KNSTRN-206ENST00000559304 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
KNSTRN-206ENST00000559304 ADCY10Q96PN6 1610 aa18.3■□□□□ 0.52
KNSTRN-206ENST00000559304 CERKQ8TCT0 537 aa18.29■□□□□ 0.52
KNSTRN-206ENST00000559304 PRG4Q92954 1404 aaPredicted RBP18.29■□□□□ 0.52
KNSTRN-206ENST00000559304 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
KNSTRN-206ENST00000559304 COL17A1Q9UMD9 1497 aaPredicted RBP18.26■□□□□ 0.51
KNSTRN-206ENST00000559304 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
KNSTRN-206ENST00000559304 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
KNSTRN-206ENST00000559304 ADAMTS12P58397 1594 aa18.15■□□□□ 0.5
KNSTRN-206ENST00000559304 JPH4Q96JJ6 628 aa18.12■□□□□ 0.49
KNSTRN-206ENST00000559304 GLI2P10070 1586 aa18.1■□□□□ 0.49
KNSTRN-206ENST00000559304 CUX1P39880 1505 aa18.09■□□□□ 0.49
KNSTRN-206ENST00000559304 PTPRMP28827 1452 aa18.08■□□□□ 0.49
KNSTRN-206ENST00000559304 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
KNSTRN-206ENST00000559304 TEX14Q8IWB6 1497 aa18.03■□□□□ 0.48
KNSTRN-206ENST00000559304 KIF21BO75037 1637 aa18.03■□□□□ 0.48
KNSTRN-206ENST00000559304 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
KNSTRN-206ENST00000559304 ASXL2Q76L83 1435 aa18.01■□□□□ 0.47
KNSTRN-206ENST00000559304 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
KNSTRN-206ENST00000559304 HSPA2P54652 639 aa17.97■□□□□ 0.47
KNSTRN-206ENST00000559304 MAP3K4Q9Y6R4 1608 aa17.97■□□□□ 0.47
KNSTRN-206ENST00000559304 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
KNSTRN-206ENST00000559304 ADAMTSL3P82987 1691 aa17.93■□□□□ 0.46
KNSTRN-206ENST00000559304 ABCC2Q92887 1545 aa17.9■□□□□ 0.46
KNSTRN-206ENST00000559304 EPRSP07814 1512 aaKnown RBP17.88■□□□□ 0.45
KNSTRN-206ENST00000559304 KIAA0586Q9BVV6 1533 aa17.85■□□□□ 0.45
KNSTRN-206ENST00000559304 CUL7Q14999 1698 aa17.83■□□□□ 0.44
KNSTRN-206ENST00000559304 TTBK1Q5TCY1 1321 aaPredicted RBP17.81■□□□□ 0.44
KNSTRN-206ENST00000559304 MADDQ8WXG6 1647 aa17.81■□□□□ 0.44
KNSTRN-206ENST00000559304 PTPRGP23470 1445 aa17.79■□□□□ 0.44
KNSTRN-206ENST00000559304 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
KNSTRN-206ENST00000559304 BCORL1Q5H9F3 1711 aa17.75■□□□□ 0.43
KNSTRN-206ENST00000559304 RIMS1Q86UR5 1692 aaKnown RBP17.71■□□□□ 0.42
KNSTRN-206ENST00000559304 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
KNSTRN-206ENST00000559304 MED1Q15648 1581 aaPredicted RBP17.67■□□□□ 0.42
KNSTRN-206ENST00000559304 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
KNSTRN-206ENST00000559304 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
KNSTRN-206ENST00000559304 MAGI3Q5TCQ9 1506 aa17.67■□□□□ 0.42
KNSTRN-206ENST00000559304 CD109Q6YHK3 1445 aa17.64■□□□□ 0.41
KNSTRN-206ENST00000559304 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
KNSTRN-206ENST00000559304 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
KNSTRN-206ENST00000559304 UACAQ9BZF9 1416 aa17.61■□□□□ 0.41
KNSTRN-206ENST00000559304 YEATS2Q9ULM3 1422 aa17.61■□□□□ 0.41
KNSTRN-206ENST00000559304 IQSEC2Q5JU85 1478 aa17.61■□□□□ 0.41
KNSTRN-206ENST00000559304 KDM5BQ9UGL1 1544 aa17.61■□□□□ 0.41
KNSTRN-206ENST00000559304 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
KNSTRN-206ENST00000559304 WDR7Q9Y4E6 1490 aa17.58■□□□□ 0.41
KNSTRN-206ENST00000559304 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.4
KNSTRN-206ENST00000559304 ARAP3Q8WWN8 1544 aa17.57■□□□□ 0.4
KNSTRN-206ENST00000559304 STRCQ7RTU9 1775 aa17.56■□□□□ 0.4
KNSTRN-206ENST00000559304 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
KNSTRN-206ENST00000559304 LTBP4Q8N2S1 1624 aa17.54■□□□□ 0.4
KNSTRN-206ENST00000559304 UBAP1LF5GYI3 381 aa17.5■□□□□ 0.39
KNSTRN-206ENST00000559304 PREX1Q8TCU6 1659 aa17.47■□□□□ 0.39
KNSTRN-206ENST00000559304 KCNH8Q96L42 1107 aa17.46■□□□□ 0.39
KNSTRN-206ENST00000559304 PTPRTO14522 1441 aa17.46■□□□□ 0.39
KNSTRN-206ENST00000559304 RAPGEF3O95398 923 aa17.45■□□□□ 0.38
KNSTRN-206ENST00000559304 HSPA1LP34931 641 aa17.39■□□□□ 0.37
KNSTRN-206ENST00000559304 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
KNSTRN-206ENST00000559304 POGZQ7Z3K3 1410 aa17.38■□□□□ 0.37
KNSTRN-206ENST00000559304 TTC37Q6PGP7 1564 aa17.38■□□□□ 0.37
KNSTRN-206ENST00000559304 ARHGEF40Q8TER5 1519 aa17.37■□□□□ 0.37
KNSTRN-206ENST00000559304 FRMPD1Q5SYB0 1578 aa17.36■□□□□ 0.37
KNSTRN-206ENST00000559304 FER1L4A9Z1Z3 1794 aa17.35■□□□□ 0.37
KNSTRN-206ENST00000559304 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
KNSTRN-206ENST00000559304 FANCAO15360 1455 aa17.34■□□□□ 0.37
KNSTRN-206ENST00000559304 UHRF1BP1Q6BDS2 1440 aa17.33■□□□□ 0.36
KNSTRN-206ENST00000559304 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
KNSTRN-206ENST00000559304 MLECQ14165 292 aa17.31■□□□□ 0.36
KNSTRN-206ENST00000559304 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
KNSTRN-206ENST00000559304 IQGAP2Q13576 1575 aa17.28■□□□□ 0.36
KNSTRN-206ENST00000559304 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
KNSTRN-206ENST00000559304 SIGLEC1Q9BZZ2 1709 aa17.25■□□□□ 0.35
KNSTRN-206ENST00000559304 CEBPAP49715 358 aaPredicted RBP17.25■□□□□ 0.35
KNSTRN-206ENST00000559304 AKNAQ7Z591 1439 aa17.23■□□□□ 0.35
KNSTRN-206ENST00000559304 NEO1Q92859 1461 aa17.23■□□□□ 0.35
KNSTRN-206ENST00000559304 ZNF335Q9H4Z2 1342 aaPredicted RBP17.22■□□□□ 0.35
KNSTRN-206ENST00000559304 IGF1RP08069 1367 aa17.18■□□□□ 0.34
KNSTRN-206ENST00000559304 RGS17Q9UGC6 210 aaPredicted RBP17.18■□□□□ 0.34
KNSTRN-206ENST00000559304 NCOA1Q15788 1441 aa17.18■□□□□ 0.34
KNSTRN-206ENST00000559304 ARHGEF12Q9NZN5 1544 aa17.16■□□□□ 0.34
KNSTRN-206ENST00000559304 ABCA9Q8IUA7 1624 aa17.16■□□□□ 0.34
KNSTRN-206ENST00000559304 KIAA0556O60303 1618 aa17.15■□□□□ 0.34
KNSTRN-206ENST00000559304 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
KNSTRN-206ENST00000559304 SUPT5HO00267 1087 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms