RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 KIAA0586Q9BVV6 1533 aa10.71□□□□□ -0.69
CHRNA3-204ENST00000559002 LOC105371045A0A1W2PR82 267 aa10.7□□□□□ -0.7
CHRNA3-204ENST00000559002 CLASP1Q7Z460 1538 aa10.69□□□□□ -0.7
CHRNA3-204ENST00000559002 IQGAP2Q13576 1575 aa10.69□□□□□ -0.7
CHRNA3-204ENST00000559002 CTTNBP2Q8WZ74 1663 aa10.68□□□□□ -0.7
CHRNA3-204ENST00000559002 TNIKQ9UKE5 1360 aa10.66□□□□□ -0.7
CHRNA3-204ENST00000559002 JPH4Q96JJ6 628 aa10.65□□□□□ -0.7
CHRNA3-204ENST00000559002 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
CHRNA3-204ENST00000559002 CARMIL2Q6F5E8 1435 aa10.62□□□□□ -0.71
CHRNA3-204ENST00000559002 PRG4Q92954 1404 aaPredicted RBP10.62□□□□□ -0.71
CHRNA3-204ENST00000559002 UGGT2Q9NYU1 1516 aa10.62□□□□□ -0.71
CHRNA3-204ENST00000559002 SHROOM2Q13796 1616 aa10.62□□□□□ -0.71
CHRNA3-204ENST00000559002 AEBP2Q6ZN18 517 aaPredicted RBP10.6□□□□□ -0.71
CHRNA3-204ENST00000559002 CLIP1P30622 1438 aa10.58□□□□□ -0.72
CHRNA3-204ENST00000559002 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
CHRNA3-204ENST00000559002 EFCAB5A4FU69 1503 aa10.58□□□□□ -0.72
CHRNA3-204ENST00000559002 KIAA0556O60303 1618 aa10.58□□□□□ -0.72
CHRNA3-204ENST00000559002 ARHGEF11O15085 1522 aa10.58□□□□□ -0.72
CHRNA3-204ENST00000559002 DISP1Q96F81 1524 aa10.58□□□□□ -0.72
CHRNA3-204ENST00000559002 SAMD9Q5K651 1589 aa10.56□□□□□ -0.72
CHRNA3-204ENST00000559002 ERCC6L2Q5T890 1561 aa10.56□□□□□ -0.72
CHRNA3-204ENST00000559002 P3H3Q8IVL6 736 aa10.56□□□□□ -0.72
CHRNA3-204ENST00000559002 TTBK1Q5TCY1 1321 aaPredicted RBP10.56□□□□□ -0.72
CHRNA3-204ENST00000559002 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
CHRNA3-204ENST00000559002 DNAJC5Q9H3Z4 198 aa10.55□□□□□ -0.72
CHRNA3-204ENST00000559002 FHOD3Q2V2M9 1422 aa10.55□□□□□ -0.72
CHRNA3-204ENST00000559002 RIMBP3CA6NJZ7 1639 aa10.54□□□□□ -0.72
CHRNA3-204ENST00000559002 RIMBP3BA6NNM3 1639 aa10.54□□□□□ -0.72
CHRNA3-204ENST00000559002 RIMBP3Q9UFD9 1639 aa10.54□□□□□ -0.72
CHRNA3-204ENST00000559002 PTPRGP23470 1445 aa10.53□□□□□ -0.72
CHRNA3-204ENST00000559002 ARAP1Q96P48 1450 aa10.5□□□□□ -0.73
CHRNA3-204ENST00000559002 FMN1Q68DA7 1419 aa10.5□□□□□ -0.73
CHRNA3-204ENST00000559002 CYB5RLQ6IPT4 315 aa10.48□□□□□ -0.73
CHRNA3-204ENST00000559002 UACAQ9BZF9 1416 aa10.46□□□□□ -0.74
CHRNA3-204ENST00000559002 PLB1Q6P1J6 1458 aa10.45□□□□□ -0.74
CHRNA3-204ENST00000559002 ATP1B4Q9UN42 357 aaPredicted RBP10.45□□□□□ -0.74
CHRNA3-204ENST00000559002 VPS8Q8N3P4 1428 aa10.44□□□□□ -0.74
CHRNA3-204ENST00000559002 ABCA8O94911 1581 aa10.43□□□□□ -0.74
CHRNA3-204ENST00000559002 ABCC2Q92887 1545 aa10.43□□□□□ -0.74
CHRNA3-204ENST00000559002 RAPGEF6Q8TEU7 1601 aa10.43□□□□□ -0.74
CHRNA3-204ENST00000559002 UHRF1BP1LA0JNW5 1464 aa10.42□□□□□ -0.74
CHRNA3-204ENST00000559002 CASKIN1Q8WXD9 1431 aa10.42□□□□□ -0.74
CHRNA3-204ENST00000559002 HECW1Q76N89 1606 aa10.42□□□□□ -0.74
CHRNA3-204ENST00000559002 PCF11O94913 1555 aaKnown RBP10.42□□□□□ -0.74
CHRNA3-204ENST00000559002 FYCO1Q9BQS8 1478 aa10.42□□□□□ -0.74
CHRNA3-204ENST00000559002 NPM1P06748 294 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHRNA3-204ENST00000559002 ADCY10Q96PN6 1610 aa10.4□□□□□ -0.74
CHRNA3-204ENST00000559002 ARID3CA6NKF2 412 aa10.4□□□□□ -0.74
CHRNA3-204ENST00000559002 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.74
CHRNA3-204ENST00000559002 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
CHRNA3-204ENST00000559002 HNRNPUL2Q1KMD3 747 aaKnown RBP10.39□□□□□ -0.75
CHRNA3-204ENST00000559002 CCDC18Q5T9S5 1454 aa10.37□□□□□ -0.75
CHRNA3-204ENST00000559002 APLP2Q06481 763 aa10.37□□□□□ -0.75
CHRNA3-204ENST00000559002 EPRSP07814 1512 aaKnown RBP10.37□□□□□ -0.75
CHRNA3-204ENST00000559002 KDM5BQ9UGL1 1544 aa10.37□□□□□ -0.75
CHRNA3-204ENST00000559002 CDK13Q14004 1512 aaKnown RBP10.36□□□□□ -0.75
CHRNA3-204ENST00000559002 ATP10BO94823 1461 aa10.35□□□□□ -0.75
CHRNA3-204ENST00000559002 ZCCHC11Q5TAX3 1644 aaKnown RBP10.34□□□□□ -0.75
CHRNA3-204ENST00000559002 CDK11AQ9UQ88 783 aaPredicted RBP10.34□□□□□ -0.75
CHRNA3-204ENST00000559002 PLEKHD1A6NEE1 506 aa10.32□□□□□ -0.76
CHRNA3-204ENST00000559002 MAPKBP1O60336 1514 aa10.31□□□□□ -0.76
CHRNA3-204ENST00000559002 ASXL2Q76L83 1435 aa10.31□□□□□ -0.76
CHRNA3-204ENST00000559002 TIAM1Q13009 1591 aa10.31□□□□□ -0.76
CHRNA3-204ENST00000559002 WDR7Q9Y4E6 1490 aa10.3□□□□□ -0.76
CHRNA3-204ENST00000559002 MTUS2Q5JR59 1369 aa10.3□□□□□ -0.76
CHRNA3-204ENST00000559002 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
CHRNA3-204ENST00000559002 CFAP43Q8NDM7 1665 aa10.3□□□□□ -0.76
CHRNA3-204ENST00000559002 LRRIQ1Q96JM4 1722 aa10.3□□□□□ -0.76
CHRNA3-204ENST00000559002 TROQ12816 1431 aaPredicted RBP10.28□□□□□ -0.76
CHRNA3-204ENST00000559002 EHBP1L1Q8N3D4 1523 aa10.28□□□□□ -0.76
CHRNA3-204ENST00000559002 KCNH8Q96L42 1107 aa10.27□□□□□ -0.77
CHRNA3-204ENST00000559002 LRRC9Q6ZRR7 1453 aa10.26□□□□□ -0.77
CHRNA3-204ENST00000559002 MAGI3Q5TCQ9 1506 aa10.25□□□□□ -0.77
CHRNA3-204ENST00000559002 KANK4Q5T7N3 995 aaPredicted RBP10.25□□□□□ -0.77
CHRNA3-204ENST00000559002 KIF14Q15058 1648 aa10.25□□□□□ -0.77
CHRNA3-204ENST00000559002 ABCC10Q5T3U5 1492 aa10.24□□□□□ -0.77
CHRNA3-204ENST00000559002 FAM69CQ0P6D2 419 aa10.23□□□□□ -0.77
CHRNA3-204ENST00000559002 PPARGC1BQ86YN6 1023 aaKnown RBP10.23□□□□□ -0.77
CHRNA3-204ENST00000559002 DIP2BQ9P265 1576 aa10.22□□□□□ -0.77
CHRNA3-204ENST00000559002 TRHP20396 242 aaPredicted RBP10.22□□□□□ -0.77
CHRNA3-204ENST00000559002 NCOA2Q15596 1464 aa10.21□□□□□ -0.78
CHRNA3-204ENST00000559002 SUPT6HQ7KZ85 1726 aaKnown RBP10.21□□□□□ -0.78
CHRNA3-204ENST00000559002 GLI2P10070 1586 aa10.2□□□□□ -0.78
CHRNA3-204ENST00000559002 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHRNA3-204ENST00000559002 CCNB3Q8WWL7 1395 aa10.2□□□□□ -0.78
CHRNA3-204ENST00000559002 TTC37Q6PGP7 1564 aa10.19□□□□□ -0.78
CHRNA3-204ENST00000559002 ABCA9Q8IUA7 1624 aa10.18□□□□□ -0.78
CHRNA3-204ENST00000559002 CD109Q6YHK3 1445 aa10.18□□□□□ -0.78
CHRNA3-204ENST00000559002 PLCH2O75038 1416 aa10.16□□□□□ -0.78
CHRNA3-204ENST00000559002 MAP3K4Q9Y6R4 1608 aa10.15□□□□□ -0.78
CHRNA3-204ENST00000559002 KIF13AQ9H1H9 1805 aa10.15□□□□□ -0.78
CHRNA3-204ENST00000559002 ARHGAP5Q13017 1502 aa10.15□□□□□ -0.78
CHRNA3-204ENST00000559002 GPATCH8Q9UKJ3 1502 aaKnown RBP10.15□□□□□ -0.78
CHRNA3-204ENST00000559002 MYOM3Q5VTT5 1437 aa10.15□□□□□ -0.79
CHRNA3-204ENST00000559002 PHLDB1Q86UU1 1377 aa10.14□□□□□ -0.79
CHRNA3-204ENST00000559002 MYO5CQ9NQX4 1742 aa10.14□□□□□ -0.79
CHRNA3-204ENST00000559002 CFDP1Q9UEE9 299 aaPredicted RBP10.14□□□□□ -0.79
CHRNA3-204ENST00000559002 TEX14Q8IWB6 1497 aa10.14□□□□□ -0.79
CHRNA3-204ENST00000559002 ITSN2Q9NZM3 1697 aa10.14□□□□□ -0.79
CHRNA3-204ENST00000559002 PREX2Q70Z35 1606 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms