RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
EXD1-204ENST00000558881 IGF1RP08069 1367 aa13.32□□□□□ -0.28
EXD1-204ENST00000558881 CLIP1P30622 1438 aa13.32□□□□□ -0.28
EXD1-204ENST00000558881 TOPBP1Q92547 1522 aa13.32□□□□□ -0.28
EXD1-204ENST00000558881 RAD54L2Q9Y4B4 1467 aa13.31□□□□□ -0.28
EXD1-204ENST00000558881 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
EXD1-204ENST00000558881 ERICH3Q5RHP9 1530 aa13.3□□□□□ -0.28
EXD1-204ENST00000558881 ATXN8OSP0DMR3 200 aa13.29□□□□□ -0.28
EXD1-204ENST00000558881 PDS5BQ9NTI5 1447 aa13.29□□□□□ -0.28
EXD1-204ENST00000558881 URB2Q14146 1524 aaKnown RBP13.28□□□□□ -0.28
EXD1-204ENST00000558881 POLA1P09884 1462 aaPredicted RBP13.28□□□□□ -0.28
EXD1-204ENST00000558881 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
EXD1-204ENST00000558881 DIEXFQ68CQ4 756 aaKnown RBP13.24□□□□□ -0.29
EXD1-204ENST00000558881 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
EXD1-204ENST00000558881 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
EXD1-204ENST00000558881 FKBP8Q14318 412 aa13.22□□□□□ -0.29
EXD1-204ENST00000558881 VPS8Q8N3P4 1428 aa13.21□□□□□ -0.29
EXD1-204ENST00000558881 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
EXD1-204ENST00000558881 KIF21AQ7Z4S6 1674 aa13.2□□□□□ -0.3
EXD1-204ENST00000558881 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
EXD1-204ENST00000558881 ARAP1Q96P48 1450 aa13.17□□□□□ -0.3
EXD1-204ENST00000558881 APLP2Q06481 763 aa13.13□□□□□ -0.31
EXD1-204ENST00000558881 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
EXD1-204ENST00000558881 WDR97A6NE52 1622 aa13.1□□□□□ -0.31
EXD1-204ENST00000558881 MRC2Q9UBG0 1479 aa13.1□□□□□ -0.31
EXD1-204ENST00000558881 SLC24A1O60721 1099 aa13.1□□□□□ -0.31
EXD1-204ENST00000558881 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
EXD1-204ENST00000558881 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
EXD1-204ENST00000558881 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
EXD1-204ENST00000558881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
EXD1-204ENST00000558881 TARBP1Q13395 1621 aaKnown RBP13.07□□□□□ -0.32
EXD1-204ENST00000558881 ABCA5Q8WWZ7 1642 aa13.07□□□□□ -0.32
EXD1-204ENST00000558881 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
EXD1-204ENST00000558881 P3H3Q8IVL6 736 aa13.06□□□□□ -0.32
EXD1-204ENST00000558881 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
EXD1-204ENST00000558881 AQRO60306 1485 aaKnown RBP eCLIP13.05□□□□□ -0.32
EXD1-204ENST00000558881 CUL7Q14999 1698 aa13.04□□□□□ -0.32
EXD1-204ENST00000558881 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
EXD1-204ENST00000558881 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
EXD1-204ENST00000558881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.33
EXD1-204ENST00000558881 WDR62O43379 1518 aa13□□□□□ -0.33
EXD1-204ENST00000558881 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
EXD1-204ENST00000558881 HNRNPUL2Q1KMD3 747 aaKnown RBP12.99□□□□□ -0.33
EXD1-204ENST00000558881 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
EXD1-204ENST00000558881 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
EXD1-204ENST00000558881 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
EXD1-204ENST00000558881 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
EXD1-204ENST00000558881 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
EXD1-204ENST00000558881 FHAD1B1AJZ9 1412 aa12.94□□□□□ -0.34
EXD1-204ENST00000558881 ATP1B4Q9UN42 357 aaPredicted RBP12.94□□□□□ -0.34
EXD1-204ENST00000558881 GRIN2BQ13224 1484 aa12.94□□□□□ -0.34
EXD1-204ENST00000558881 CTTNBP2Q8WZ74 1663 aa12.93□□□□□ -0.34
EXD1-204ENST00000558881 YTHDC1Q96MU7 727 aaKnown RBP12.92□□□□□ -0.34
EXD1-204ENST00000558881 PBRM1Q86U86 1689 aa12.92□□□□□ -0.34
EXD1-204ENST00000558881 THOC2Q8NI27 1593 aaKnown RBP12.91□□□□□ -0.34
EXD1-204ENST00000558881 EFCAB5A4FU69 1503 aa12.91□□□□□ -0.34
EXD1-204ENST00000558881 ADAMTS12P58397 1594 aa12.89□□□□□ -0.35
EXD1-204ENST00000558881 PCF11O94913 1555 aaKnown RBP12.88□□□□□ -0.35
EXD1-204ENST00000558881 TIAM1Q13009 1591 aa12.88□□□□□ -0.35
EXD1-204ENST00000558881 MAP3K1Q13233 1512 aa12.88□□□□□ -0.35
EXD1-204ENST00000558881 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
EXD1-204ENST00000558881 SNAPC4Q5SXM2 1469 aa12.86□□□□□ -0.35
EXD1-204ENST00000558881 CASKIN1Q8WXD9 1431 aa12.86□□□□□ -0.35
EXD1-204ENST00000558881 LRRC9Q6ZRR7 1453 aa12.86□□□□□ -0.35
EXD1-204ENST00000558881 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
EXD1-204ENST00000558881 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
EXD1-204ENST00000558881 MIER1Q8N108 512 aa12.85□□□□□ -0.35
EXD1-204ENST00000558881 EIF4G3O43432 1585 aaKnown RBP12.85□□□□□ -0.35
EXD1-204ENST00000558881 SAMD9Q5K651 1589 aa12.85□□□□□ -0.35
EXD1-204ENST00000558881 FMN1Q68DA7 1419 aa12.85□□□□□ -0.35
EXD1-204ENST00000558881 FYCO1Q9BQS8 1478 aa12.84□□□□□ -0.35
EXD1-204ENST00000558881 CCNB3Q8WWL7 1395 aa12.82□□□□□ -0.36
EXD1-204ENST00000558881 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
EXD1-204ENST00000558881 SUPT16HQ9Y5B9 1047 aaKnown RBP12.81□□□□□ -0.36
EXD1-204ENST00000558881 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
EXD1-204ENST00000558881 IQGAP2Q13576 1575 aa12.8□□□□□ -0.36
EXD1-204ENST00000558881 ITGAEP38570 1179 aa12.8□□□□□ -0.36
EXD1-204ENST00000558881 FBLN2P98095 1184 aa12.8□□□□□ -0.36
EXD1-204ENST00000558881 CHMP7Q8WUX9 453 aaPredicted RBP12.8□□□□□ -0.36
EXD1-204ENST00000558881 GRIN2AQ12879 1464 aa12.79□□□□□ -0.36
EXD1-204ENST00000558881 CFAP43Q8NDM7 1665 aa12.78□□□□□ -0.36
EXD1-204ENST00000558881 KIAA0586Q9BVV6 1533 aa12.77□□□□□ -0.36
EXD1-204ENST00000558881 MAGI1Q96QZ7 1491 aaPredicted RBP12.77□□□□□ -0.37
EXD1-204ENST00000558881 SYNJ2O15056 1496 aa12.75□□□□□ -0.37
EXD1-204ENST00000558881 UGGT2Q9NYU1 1516 aa12.75□□□□□ -0.37
EXD1-204ENST00000558881 FAM50AQ14320 339 aaKnown RBP12.74□□□□□ -0.37
EXD1-204ENST00000558881 MTUS2Q5JR59 1369 aa12.73□□□□□ -0.37
EXD1-204ENST00000558881 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
EXD1-204ENST00000558881 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
EXD1-204ENST00000558881 LRRIQ1Q96JM4 1722 aa12.71□□□□□ -0.37
EXD1-204ENST00000558881 CEP170Q5SW79 1584 aa12.71□□□□□ -0.38
EXD1-204ENST00000558881 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
EXD1-204ENST00000558881 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
EXD1-204ENST00000558881 NUP160Q12769 1436 aa12.68□□□□□ -0.38
EXD1-204ENST00000558881 DHX57Q6P158 1386 aaKnown RBP12.68□□□□□ -0.38
EXD1-204ENST00000558881 MAGI3Q5TCQ9 1506 aa12.67□□□□□ -0.38
EXD1-204ENST00000558881 KIAA0556O60303 1618 aa12.67□□□□□ -0.38
EXD1-204ENST00000558881 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
EXD1-204ENST00000558881 EPRSP07814 1512 aaKnown RBP12.67□□□□□ -0.38
EXD1-204ENST00000558881 NCOA2Q15596 1464 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms