RNA–Protein interactions for RNA: ENST00000558777.5

RMDN3-207, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,139 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-207ENST00000558777 EFCAB5A4FU69 1503 aa25.43■■□□□ 1.66
RMDN3-207ENST00000558777 ABCA5Q8WWZ7 1642 aa25.42■■□□□ 1.66
RMDN3-207ENST00000558777 LRRC9Q6ZRR7 1453 aa25.42■■□□□ 1.66
RMDN3-207ENST00000558777 DHX57Q6P158 1386 aaKnown RBP25.41■■□□□ 1.66
RMDN3-207ENST00000558777 TDRD9Q8NDG6 1382 aaKnown RBP25.39■■□□□ 1.66
RMDN3-207ENST00000558777 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
RMDN3-207ENST00000558777 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
RMDN3-207ENST00000558777 P3H3Q8IVL6 736 aa25.37■■□□□ 1.65
RMDN3-207ENST00000558777 FHOD3Q2V2M9 1422 aa25.37■■□□□ 1.65
RMDN3-207ENST00000558777 KIF21AQ7Z4S6 1674 aa25.37■■□□□ 1.65
RMDN3-207ENST00000558777 CTTNBP2Q8WZ74 1663 aa25.37■■□□□ 1.65
RMDN3-207ENST00000558777 CFAP43Q8NDM7 1665 aa25.34■■□□□ 1.65
RMDN3-207ENST00000558777 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.658e-7■■■■■ 39
RMDN3-207ENST00000558777 FYCO1Q9BQS8 1478 aa25.33■■□□□ 1.65
RMDN3-207ENST00000558777 CASKIN1Q8WXD9 1431 aa25.32■■□□□ 1.64
RMDN3-207ENST00000558777 PHLDB1Q86UU1 1377 aa25.29■■□□□ 1.64
RMDN3-207ENST00000558777 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
RMDN3-207ENST00000558777 FMN1Q68DA7 1419 aa25.25■■□□□ 1.63
RMDN3-207ENST00000558777 ITGAEP38570 1179 aa25.22■■□□□ 1.63
RMDN3-207ENST00000558777 ATP1B4Q9UN42 357 aaPredicted RBP25.22■■□□□ 1.63
RMDN3-207ENST00000558777 SAMD9Q5K651 1589 aa25.21■■□□□ 1.63
RMDN3-207ENST00000558777 SNAPC4Q5SXM2 1469 aa25.2■■□□□ 1.62
RMDN3-207ENST00000558777 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
RMDN3-207ENST00000558777 RAB3GAP2Q9H2M9 1393 aa25.16■■□□□ 1.62
RMDN3-207ENST00000558777 SETD5Q9C0A6 1442 aa25.13■■□□□ 1.61
RMDN3-207ENST00000558777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.12■■□□□ 1.61
RMDN3-207ENST00000558777 FAM50AQ14320 339 aaKnown RBP25.11■■□□□ 1.61
RMDN3-207ENST00000558777 SCAF1Q9H7N4 1312 aaKnown RBP25.08■■□□□ 1.61
RMDN3-207ENST00000558777 PBRM1Q86U86 1689 aa25.08■■□□□ 1.61
RMDN3-207ENST00000558777 GRIN2BQ13224 1484 aa25.07■■□□□ 1.6
RMDN3-207ENST00000558777 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
RMDN3-207ENST00000558777 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
RMDN3-207ENST00000558777 ADAMTS12P58397 1594 aa25.03■■□□□ 1.6
RMDN3-207ENST00000558777 MAPKBP1O60336 1514 aa25.03■■□□□ 1.6
RMDN3-207ENST00000558777 MTUS2Q5JR59 1369 aa25.02■■□□□ 1.6
RMDN3-207ENST00000558777 FGD6Q6ZV73 1430 aa25.01■■□□□ 1.59
RMDN3-207ENST00000558777 IFT140Q96RY7 1462 aa25■■□□□ 1.59
RMDN3-207ENST00000558777 NEUROD1Q13562 356 aa24.99■■□□□ 1.59
RMDN3-207ENST00000558777 CENPBP07199 599 aaPredicted RBP24.98■■□□□ 1.59
RMDN3-207ENST00000558777 WDR62O43379 1518 aa24.98■■□□□ 1.59
RMDN3-207ENST00000558777 LRRIQ1Q96JM4 1722 aa24.98■■□□□ 1.59
RMDN3-207ENST00000558777 IQGAP2Q13576 1575 aa24.96■■□□□ 1.59
RMDN3-207ENST00000558777 MIER1Q8N108 512 aa24.96■■□□□ 1.59
RMDN3-207ENST00000558777 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
RMDN3-207ENST00000558777 NCOA2Q15596 1464 aa24.92■■□□□ 1.58
RMDN3-207ENST00000558777 EHBP1L1Q8N3D4 1523 aa24.92■■□□□ 1.58
RMDN3-207ENST00000558777 CCDC18Q5T9S5 1454 aa24.91■■□□□ 1.58
RMDN3-207ENST00000558777 MYOM3Q5VTT5 1437 aa24.89■■□□□ 1.58
RMDN3-207ENST00000558777 SUPT6HQ7KZ85 1726 aaKnown RBP24.87■■□□□ 1.57
RMDN3-207ENST00000558777 UGGT2Q9NYU1 1516 aa24.87■■□□□ 1.57
RMDN3-207ENST00000558777 ARHGEF11O15085 1522 aa24.86■■□□□ 1.57
RMDN3-207ENST00000558777 HECW1Q76N89 1606 aa24.85■■□□□ 1.57
RMDN3-207ENST00000558777 MAGI3Q5TCQ9 1506 aa24.84■■□□□ 1.57
RMDN3-207ENST00000558777 PTPRKQ15262 1439 aa24.82■■□□□ 1.56
RMDN3-207ENST00000558777 HFM1A2PYH4 1435 aa24.81■■□□□ 1.56
RMDN3-207ENST00000558777 EPRSP07814 1512 aaKnown RBP24.8■■□□□ 1.56
RMDN3-207ENST00000558777 KIAA0586Q9BVV6 1533 aa24.8■■□□□ 1.56
RMDN3-207ENST00000558777 TIMELESSQ9UNS1 1208 aa24.78■■□□□ 1.56
RMDN3-207ENST00000558777 SIN3AQ96ST3 1273 aa24.77■■□□□ 1.56
RMDN3-207ENST00000558777 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
RMDN3-207ENST00000558777 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
RMDN3-207ENST00000558777 PTPN23Q9H3S7 1636 aa24.75■■□□□ 1.55
RMDN3-207ENST00000558777 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
RMDN3-207ENST00000558777 TCOF1Q13428 1488 aaKnown RBP24.73■■□□□ 1.55
RMDN3-207ENST00000558777 NAIPQ13075 1403 aa24.72■■□□□ 1.55
RMDN3-207ENST00000558777 DISP1Q96F81 1524 aa24.72■■□□□ 1.55
RMDN3-207ENST00000558777 CDK13Q14004 1512 aaKnown RBP24.71■■□□□ 1.55
RMDN3-207ENST00000558777 YTHDC1Q96MU7 727 aaKnown RBP24.7■■□□□ 1.54
RMDN3-207ENST00000558777 KIAA0556O60303 1618 aa24.7■■□□□ 1.54
RMDN3-207ENST00000558777 UACAQ9BZF9 1416 aa24.7■■□□□ 1.54
RMDN3-207ENST00000558777 GTF3C3Q9Y5Q9 886 aa24.68■■□□□ 1.54
RMDN3-207ENST00000558777 MAGI1Q96QZ7 1491 aaPredicted RBP24.68■■□□□ 1.54
RMDN3-207ENST00000558777 MIA2Q96PC5 1412 aa24.66■■□□□ 1.54
RMDN3-207ENST00000558777 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
RMDN3-207ENST00000558777 PPP1R15AO75807 674 aaPredicted RBP24.61■■□□□ 1.53
RMDN3-207ENST00000558777 NUP153P49790 1475 aaKnown RBP24.59■■□□□ 1.53
RMDN3-207ENST00000558777 AKNAQ7Z591 1439 aa24.59■■□□□ 1.53
RMDN3-207ENST00000558777 CHMP7Q8WUX9 453 aaPredicted RBP24.58■■□□□ 1.52
RMDN3-207ENST00000558777 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
RMDN3-207ENST00000558777 RAPGEF6Q8TEU7 1601 aa24.56■■□□□ 1.52
RMDN3-207ENST00000558777 CEP170Q5SW79 1584 aa24.56■■□□□ 1.52
RMDN3-207ENST00000558777 RRP7BPQ9NSQ0 103 aa24.53■■□□□ 1.52
RMDN3-207ENST00000558777 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
RMDN3-207ENST00000558777 CHIC2Q9UKJ5 165 aa24.52■■□□□ 1.52
RMDN3-207ENST00000558777 NUP160Q12769 1436 aa24.51■■□□□ 1.51
RMDN3-207ENST00000558777 TONSLQ96HA7 1378 aa24.51■■□□□ 1.51
RMDN3-207ENST00000558777 CDK11AQ9UQ88 783 aaPredicted RBP24.5■■□□□ 1.51
RMDN3-207ENST00000558777 FBLN2P98095 1184 aa24.44■■□□□ 1.5
RMDN3-207ENST00000558777 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
RMDN3-207ENST00000558777 JPH4Q96JJ6 628 aa24.44■■□□□ 1.5
RMDN3-207ENST00000558777 ROCK1Q13464 1354 aa24.44■■□□□ 1.5
RMDN3-207ENST00000558777 DAPK1P53355 1430 aa24.43■■□□□ 1.5
RMDN3-207ENST00000558777 TROQ12816 1431 aaPredicted RBP24.43■■□□□ 1.5
RMDN3-207ENST00000558777 DENND4BO75064 1496 aaPredicted RBP24.42■■□□□ 1.5
RMDN3-207ENST00000558777 PLB1Q6P1J6 1458 aa24.42■■□□□ 1.5
RMDN3-207ENST00000558777 KDM6BO15054 1643 aa24.42■■□□□ 1.5
RMDN3-207ENST00000558777 ABCC5O15440 1437 aa24.4■■□□□ 1.5
RMDN3-207ENST00000558777 DNMT1P26358 1616 aaKnown RBP24.4■■□□□ 1.5
RMDN3-207ENST00000558777 PRG4Q92954 1404 aaPredicted RBP24.39■■□□□ 1.5
RMDN3-207ENST00000558777 KDM5BQ9UGL1 1544 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms