RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 FHOD3Q2V2M9 1422 aa16.26■□□□□ 0.19
CSPG4P5-201ENST00000558731 FAM50AQ14320 339 aaKnown RBP16.25■□□□□ 0.19
CSPG4P5-201ENST00000558731 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
CSPG4P5-201ENST00000558731 CHMP7Q8WUX9 453 aaPredicted RBP16.24■□□□□ 0.19
CSPG4P5-201ENST00000558731 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
CSPG4P5-201ENST00000558731 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.17
CSPG4P5-201ENST00000558731 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
CSPG4P5-201ENST00000558731 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
CSPG4P5-201ENST00000558731 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
CSPG4P5-201ENST00000558731 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
CSPG4P5-201ENST00000558731 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
CSPG4P5-201ENST00000558731 CUL7Q14999 1698 aa16.04■□□□□ 0.16
CSPG4P5-201ENST00000558731 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
CSPG4P5-201ENST00000558731 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
CSPG4P5-201ENST00000558731 CCNB3Q8WWL7 1395 aa16.01■□□□□ 0.15
CSPG4P5-201ENST00000558731 FMN1Q68DA7 1419 aa15.99■□□□□ 0.15
CSPG4P5-201ENST00000558731 WDR62O43379 1518 aa15.98■□□□□ 0.15
CSPG4P5-201ENST00000558731 PCF11O94913 1555 aaKnown RBP15.96■□□□□ 0.15
CSPG4P5-201ENST00000558731 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
CSPG4P5-201ENST00000558731 CHIC2Q9UKJ5 165 aa15.95■□□□□ 0.14
CSPG4P5-201ENST00000558731 PHLDB1Q86UU1 1377 aa15.95■□□□□ 0.14
CSPG4P5-201ENST00000558731 JPH4Q96JJ6 628 aa15.94■□□□□ 0.14
CSPG4P5-201ENST00000558731 LRRC9Q6ZRR7 1453 aa15.93■□□□□ 0.14
CSPG4P5-201ENST00000558731 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
CSPG4P5-201ENST00000558731 ZNF777Q9ULD5 760 aaPredicted RBP15.92■□□□□ 0.14
CSPG4P5-201ENST00000558731 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
CSPG4P5-201ENST00000558731 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
CSPG4P5-201ENST00000558731 CTTNBP2Q8WZ74 1663 aa15.91■□□□□ 0.14
CSPG4P5-201ENST00000558731 EFCAB5A4FU69 1503 aa15.9■□□□□ 0.14
CSPG4P5-201ENST00000558731 CASKIN1Q8WXD9 1431 aa15.9■□□□□ 0.14
CSPG4P5-201ENST00000558731 NEUROD1Q13562 356 aa15.89■□□□□ 0.13
CSPG4P5-201ENST00000558731 ADAMTS12P58397 1594 aa15.89■□□□□ 0.13
CSPG4P5-201ENST00000558731 IQGAP2Q13576 1575 aa15.88■□□□□ 0.13
CSPG4P5-201ENST00000558731 GRIN2AQ12879 1464 aa15.88■□□□□ 0.13
CSPG4P5-201ENST00000558731 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
CSPG4P5-201ENST00000558731 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
CSPG4P5-201ENST00000558731 RRP7BPQ9NSQ0 103 aa15.85■□□□□ 0.13
CSPG4P5-201ENST00000558731 CDK11AQ9UQ88 783 aaPredicted RBP15.84■□□□□ 0.13
CSPG4P5-201ENST00000558731 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
CSPG4P5-201ENST00000558731 TRIM52Q96A61 297 aa15.82■□□□□ 0.12
CSPG4P5-201ENST00000558731 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
CSPG4P5-201ENST00000558731 RRBP1Q9P2E9 1410 aaKnown RBP15.81■□□□□ 0.12
CSPG4P5-201ENST00000558731 CDK13Q14004 1512 aaKnown RBP15.81■□□□□ 0.12
CSPG4P5-201ENST00000558731 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
CSPG4P5-201ENST00000558731 RAB3GAP2Q9H2M9 1393 aa15.8■□□□□ 0.12
CSPG4P5-201ENST00000558731 CARMIL2Q6F5E8 1435 aa15.79■□□□□ 0.12
CSPG4P5-201ENST00000558731 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
CSPG4P5-201ENST00000558731 NCOA2Q15596 1464 aa15.75■□□□□ 0.11
CSPG4P5-201ENST00000558731 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
CSPG4P5-201ENST00000558731 DIEXFQ68CQ4 756 aaKnown RBP15.75■□□□□ 0.11
CSPG4P5-201ENST00000558731 SIN3AQ96ST3 1273 aa15.75■□□□□ 0.11
CSPG4P5-201ENST00000558731 DHX57Q6P158 1386 aaKnown RBP15.74■□□□□ 0.11
CSPG4P5-201ENST00000558731 PLB1Q6P1J6 1458 aa15.74■□□□□ 0.11
CSPG4P5-201ENST00000558731 ZNF644Q9H582 1327 aaPredicted RBP15.73■□□□□ 0.11
CSPG4P5-201ENST00000558731 SAMD9Q5K651 1589 aa15.73■□□□□ 0.11
CSPG4P5-201ENST00000558731 FGD6Q6ZV73 1430 aa15.73■□□□□ 0.11
CSPG4P5-201ENST00000558731 CFDP1Q9UEE9 299 aaPredicted RBP15.72■□□□□ 0.11
CSPG4P5-201ENST00000558731 EPRSP07814 1512 aaKnown RBP15.72■□□□□ 0.11
CSPG4P5-201ENST00000558731 PRG4Q92954 1404 aaPredicted RBP15.72■□□□□ 0.11
CSPG4P5-201ENST00000558731 SETD5Q9C0A6 1442 aa15.72■□□□□ 0.11
CSPG4P5-201ENST00000558731 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
CSPG4P5-201ENST00000558731 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
CSPG4P5-201ENST00000558731 MAP3K1Q13233 1512 aa15.7■□□□□ 0.1
CSPG4P5-201ENST00000558731 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
CSPG4P5-201ENST00000558731 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
CSPG4P5-201ENST00000558731 PTPRGP23470 1445 aa15.69■□□□□ 0.1
CSPG4P5-201ENST00000558731 MYOM3Q5VTT5 1437 aa15.68■□□□□ 0.1
CSPG4P5-201ENST00000558731 CFAP43Q8NDM7 1665 aa15.67■□□□□ 0.1
CSPG4P5-201ENST00000558731 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
CSPG4P5-201ENST00000558731 HECW1Q76N89 1606 aa15.67■□□□□ 0.1
CSPG4P5-201ENST00000558731 UGGT2Q9NYU1 1516 aa15.67■□□□□ 0.1
CSPG4P5-201ENST00000558731 KIAA0556O60303 1618 aa15.66■□□□□ 0.1
CSPG4P5-201ENST00000558731 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
CSPG4P5-201ENST00000558731 YTHDC1Q96MU7 727 aaKnown RBP15.63■□□□□ 0.09
CSPG4P5-201ENST00000558731 EHBP1L1Q8N3D4 1523 aa15.62■□□□□ 0.09
CSPG4P5-201ENST00000558731 NUP160Q12769 1436 aa15.62■□□□□ 0.09
CSPG4P5-201ENST00000558731 NUP153P49790 1475 aaKnown RBP15.62■□□□□ 0.09
CSPG4P5-201ENST00000558731 MYT1LQ9UL68 1186 aa15.62■□□□□ 0.09
CSPG4P5-201ENST00000558731 FOXD1Q16676 465 aa15.61■□□□□ 0.09
CSPG4P5-201ENST00000558731 HIRIP3Q9BW71 556 aaPredicted RBP15.61■□□□□ 0.09
CSPG4P5-201ENST00000558731 SUPT6HQ7KZ85 1726 aaKnown RBP15.6■□□□□ 0.09
CSPG4P5-201ENST00000558731 PTPRKQ15262 1439 aa15.59■□□□□ 0.09
CSPG4P5-201ENST00000558731 LRRIQ1Q96JM4 1722 aa15.56■□□□□ 0.08
CSPG4P5-201ENST00000558731 RAPGEF6Q8TEU7 1601 aa15.56■□□□□ 0.08
CSPG4P5-201ENST00000558731 HNRNPMP52272 730 aaKnown RBP eCLIP15.56■□□□□ 0.08
CSPG4P5-201ENST00000558731 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
CSPG4P5-201ENST00000558731 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
CSPG4P5-201ENST00000558731 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
CSPG4P5-201ENST00000558731 TROQ12816 1431 aaPredicted RBP15.53■□□□□ 0.08
CSPG4P5-201ENST00000558731 TONSLQ96HA7 1378 aa15.53■□□□□ 0.08
CSPG4P5-201ENST00000558731 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.07
CSPG4P5-201ENST00000558731 PTPN23Q9H3S7 1636 aa15.51■□□□□ 0.07
CSPG4P5-201ENST00000558731 CHD1O14646 1710 aa15.51■□□□□ 0.07
CSPG4P5-201ENST00000558731 ZNF326Q5BKZ1 582 aaKnown RBP15.5■□□□□ 0.07
CSPG4P5-201ENST00000558731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.07
CSPG4P5-201ENST00000558731 ATP10BO94823 1461 aa15.48■□□□□ 0.07
CSPG4P5-201ENST00000558731 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
CSPG4P5-201ENST00000558731 ARHGEF11O15085 1522 aa15.47■□□□□ 0.07
CSPG4P5-201ENST00000558731 NAIPQ13075 1403 aa15.47■□□□□ 0.07
CSPG4P5-201ENST00000558731 ERCC6L2Q5T890 1561 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms