RNA–Protein interactions for RNA: ENST00000558645.5

CCDC33-204, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-204ENST00000558645 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
CCDC33-204ENST00000558645 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
CCDC33-204ENST00000558645 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
CCDC33-204ENST00000558645 NUP160Q12769 1436 aa19.39■□□□□ 0.69
CCDC33-204ENST00000558645 CLASP1Q7Z460 1538 aa19.37■□□□□ 0.69
CCDC33-204ENST00000558645 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
CCDC33-204ENST00000558645 CYB5RLQ6IPT4 315 aa19.32■□□□□ 0.68
CCDC33-204ENST00000558645 IQGAP2Q13576 1575 aa19.32■□□□□ 0.68
CCDC33-204ENST00000558645 LOC105371045A0A1W2PR82 267 aa19.31■□□□□ 0.68
CCDC33-204ENST00000558645 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
CCDC33-204ENST00000558645 KIAA0586Q9BVV6 1533 aa19.28■□□□□ 0.68
CCDC33-204ENST00000558645 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
CCDC33-204ENST00000558645 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
CCDC33-204ENST00000558645 RANGAP1P46060 587 aaPredicted RBP19.23■□□□□ 0.67
CCDC33-204ENST00000558645 ERCC6L2Q5T890 1561 aa19.23■□□□□ 0.67
CCDC33-204ENST00000558645 UGGT2Q9NYU1 1516 aa19.17■□□□□ 0.66
CCDC33-204ENST00000558645 JPH4Q96JJ6 628 aa19.17■□□□□ 0.66
CCDC33-204ENST00000558645 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
CCDC33-204ENST00000558645 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
CCDC33-204ENST00000558645 KIAA0556O60303 1618 aa19.14■□□□□ 0.66
CCDC33-204ENST00000558645 SAMD9Q5K651 1589 aa19.14■□□□□ 0.65
CCDC33-204ENST00000558645 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
CCDC33-204ENST00000558645 P3H3Q8IVL6 736 aa19.08■□□□□ 0.64
CCDC33-204ENST00000558645 ARHGAP35Q9NRY4 1499 aa19.06■□□□□ 0.64
CCDC33-204ENST00000558645 CEP162Q5TB80 1403 aa19.06■□□□□ 0.64
CCDC33-204ENST00000558645 EFCAB5A4FU69 1503 aa19.05■□□□□ 0.64
CCDC33-204ENST00000558645 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
CCDC33-204ENST00000558645 CARMIL2Q6F5E8 1435 aa19.04■□□□□ 0.64
CCDC33-204ENST00000558645 CLIP1P30622 1438 aa19.03■□□□□ 0.64
CCDC33-204ENST00000558645 FHOD3Q2V2M9 1422 aa19.03■□□□□ 0.64
CCDC33-204ENST00000558645 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
CCDC33-204ENST00000558645 PTPRGP23470 1445 aa18.93■□□□□ 0.62
CCDC33-204ENST00000558645 LRRIQ1Q96JM4 1722 aa18.91■□□□□ 0.62
CCDC33-204ENST00000558645 RAPGEF6Q8TEU7 1601 aa18.9■□□□□ 0.62
CCDC33-204ENST00000558645 ADCY10Q96PN6 1610 aa18.9■□□□□ 0.62
CCDC33-204ENST00000558645 PLB1Q6P1J6 1458 aa18.9■□□□□ 0.62
CCDC33-204ENST00000558645 ABCA8O94911 1581 aa18.89■□□□□ 0.61
CCDC33-204ENST00000558645 PCF11O94913 1555 aaKnown RBP18.89■□□□□ 0.61
CCDC33-204ENST00000558645 ABCC2Q92887 1545 aa18.83■□□□□ 0.6
CCDC33-204ENST00000558645 FMN1Q68DA7 1419 aa18.83■□□□□ 0.6
CCDC33-204ENST00000558645 UACAQ9BZF9 1416 aa18.83■□□□□ 0.6
CCDC33-204ENST00000558645 ZCCHC11Q5TAX3 1644 aaKnown RBP18.81■□□□□ 0.6
CCDC33-204ENST00000558645 HECW1Q76N89 1606 aa18.81■□□□□ 0.6
CCDC33-204ENST00000558645 ARID3CA6NKF2 412 aa18.8■□□□□ 0.6
CCDC33-204ENST00000558645 ATP1B4Q9UN42 357 aaPredicted RBP18.78■□□□□ 0.6
CCDC33-204ENST00000558645 UHRF1BP1LA0JNW5 1464 aa18.77■□□□□ 0.6
CCDC33-204ENST00000558645 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.6
CCDC33-204ENST00000558645 VPS8Q8N3P4 1428 aa18.77■□□□□ 0.6
CCDC33-204ENST00000558645 CASKIN1Q8WXD9 1431 aa18.75■□□□□ 0.59
CCDC33-204ENST00000558645 CDK13Q14004 1512 aaKnown RBP18.74■□□□□ 0.59
CCDC33-204ENST00000558645 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
CCDC33-204ENST00000558645 NPM1P06748 294 aaKnown RBP eCLIP18.73■□□□□ 0.59
CCDC33-204ENST00000558645 KDM5BQ9UGL1 1544 aa18.71■□□□□ 0.59
CCDC33-204ENST00000558645 EPRSP07814 1512 aaKnown RBP18.7■□□□□ 0.58
CCDC33-204ENST00000558645 CFAP43Q8NDM7 1665 aa18.7■□□□□ 0.58
CCDC33-204ENST00000558645 ATP10BO94823 1461 aa18.7■□□□□ 0.58
CCDC33-204ENST00000558645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
CCDC33-204ENST00000558645 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
CCDC33-204ENST00000558645 MAPKBP1O60336 1514 aa18.64■□□□□ 0.58
CCDC33-204ENST00000558645 CCDC18Q5T9S5 1454 aa18.64■□□□□ 0.57
CCDC33-204ENST00000558645 TIAM1Q13009 1591 aa18.64■□□□□ 0.57
CCDC33-204ENST00000558645 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
CCDC33-204ENST00000558645 MAGI3Q5TCQ9 1506 aa18.62■□□□□ 0.57
CCDC33-204ENST00000558645 KIF13AQ9H1H9 1805 aa18.61■□□□□ 0.57
CCDC33-204ENST00000558645 ASXL2Q76L83 1435 aa18.6■□□□□ 0.57
CCDC33-204ENST00000558645 FAM69CQ0P6D2 419 aa18.6■□□□□ 0.57
CCDC33-204ENST00000558645 KIF14Q15058 1648 aa18.57■□□□□ 0.56
CCDC33-204ENST00000558645 WDR7Q9Y4E6 1490 aa18.56■□□□□ 0.56
CCDC33-204ENST00000558645 TSPOAP1O95153 1857 aa18.55■□□□□ 0.56
CCDC33-204ENST00000558645 DIP2BQ9P265 1576 aa18.53■□□□□ 0.56
CCDC33-204ENST00000558645 MAP3K1Q13233 1512 aa18.53■□□□□ 0.56
CCDC33-204ENST00000558645 KCNH8Q96L42 1107 aa18.52■□□□□ 0.56
CCDC33-204ENST00000558645 EHBP1L1Q8N3D4 1523 aa18.51■□□□□ 0.55
CCDC33-204ENST00000558645 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
CCDC33-204ENST00000558645 APLP2Q06481 763 aa18.51■□□□□ 0.55
CCDC33-204ENST00000558645 KANK4Q5T7N3 995 aaPredicted RBP18.51■□□□□ 0.55
CCDC33-204ENST00000558645 PPARGC1BQ86YN6 1023 aaKnown RBP18.51■□□□□ 0.55
CCDC33-204ENST00000558645 LRRC9Q6ZRR7 1453 aa18.5■□□□□ 0.55
CCDC33-204ENST00000558645 TTC37Q6PGP7 1564 aa18.5■□□□□ 0.55
CCDC33-204ENST00000558645 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
CCDC33-204ENST00000558645 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
CCDC33-204ENST00000558645 MTUS2Q5JR59 1369 aa18.48■□□□□ 0.55
CCDC33-204ENST00000558645 CDC42BPAQ5VT25 1732 aa18.47■□□□□ 0.55
CCDC33-204ENST00000558645 CDK11AQ9UQ88 783 aaPredicted RBP18.47■□□□□ 0.55
CCDC33-204ENST00000558645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.47■□□□□ 0.55
CCDC33-204ENST00000558645 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
CCDC33-204ENST00000558645 MYO5CQ9NQX4 1742 aa18.46■□□□□ 0.55
CCDC33-204ENST00000558645 MAP3K4Q9Y6R4 1608 aa18.45■□□□□ 0.54
CCDC33-204ENST00000558645 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
CCDC33-204ENST00000558645 GLI2P10070 1586 aa18.43■□□□□ 0.54
CCDC33-204ENST00000558645 PPRC1Q5VV67 1664 aaKnown RBP18.43■□□□□ 0.54
CCDC33-204ENST00000558645 NCOA2Q15596 1464 aa18.39■□□□□ 0.54
CCDC33-204ENST00000558645 PREX2Q70Z35 1606 aa18.38■□□□□ 0.53
CCDC33-204ENST00000558645 ITSN2Q9NZM3 1697 aa18.38■□□□□ 0.53
CCDC33-204ENST00000558645 CD109Q6YHK3 1445 aa18.33■□□□□ 0.53
CCDC33-204ENST00000558645 CCNB3Q8WWL7 1395 aa18.31■□□□□ 0.52
CCDC33-204ENST00000558645 GPATCH8Q9UKJ3 1502 aaKnown RBP18.31■□□□□ 0.52
CCDC33-204ENST00000558645 PHLDB1Q86UU1 1377 aa18.3■□□□□ 0.52
CCDC33-204ENST00000558645 ARHGAP5Q13017 1502 aa18.3■□□□□ 0.52
CCDC33-204ENST00000558645 KDM6BO15054 1643 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms