RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
PBX4-202ENST00000557978 SHROOM2Q13796 1616 aa27.84■■■□□ 2.05
PBX4-202ENST00000557978 KIAA0586Q9BVV6 1533 aa27.82■■■□□ 2.04
PBX4-202ENST00000557978 FAM9AQ8IZU1 332 aaPredicted RBP27.8■■■□□ 2.04
PBX4-202ENST00000557978 CTTNBP2Q8WZ74 1663 aa27.77■■■□□ 2.04
PBX4-202ENST00000557978 JPH4Q96JJ6 628 aa27.75■■■□□ 2.03
PBX4-202ENST00000557978 IQGAP2Q13576 1575 aa27.73■■■□□ 2.03
PBX4-202ENST00000557978 KIF21BO75037 1637 aa27.69■■■□□ 2.02
PBX4-202ENST00000557978 PRG4Q92954 1404 aaPredicted RBP27.67■■■□□ 2.02
PBX4-202ENST00000557978 ARAP1Q96P48 1450 aa27.66■■■□□ 2.02
PBX4-202ENST00000557978 ERCC6L2Q5T890 1561 aa27.65■■■□□ 2.02
PBX4-202ENST00000557978 CYB5RLQ6IPT4 315 aa27.62■■■□□ 2.01
PBX4-202ENST00000557978 UGGT2Q9NYU1 1516 aa27.55■■■□□ 2
PBX4-202ENST00000557978 CARMIL2Q6F5E8 1435 aa27.55■■■□□ 2
PBX4-202ENST00000557978 GOLGA3Q08378 1498 aa27.51■■□□□ 1.99
PBX4-202ENST00000557978 DISP1Q96F81 1524 aa27.46■■□□□ 1.99
PBX4-202ENST00000557978 KIAA0556O60303 1618 aa27.44■■□□□ 1.98
PBX4-202ENST00000557978 UBTFP17480 764 aaKnown RBP27.42■■□□□ 1.98
PBX4-202ENST00000557978 TNIKQ9UKE5 1360 aa27.41■■□□□ 1.98
PBX4-202ENST00000557978 EHMT2Q96KQ7 1210 aa27.4■■□□□ 1.98
PBX4-202ENST00000557978 PTPRGP23470 1445 aa27.37■■□□□ 1.97
PBX4-202ENST00000557978 SAMD9Q5K651 1589 aa27.33■■□□□ 1.97
PBX4-202ENST00000557978 TTBK1Q5TCY1 1321 aaPredicted RBP27.3■■□□□ 1.96
PBX4-202ENST00000557978 EFCAB5A4FU69 1503 aa27.26■■□□□ 1.95
PBX4-202ENST00000557978 RANGAP1P46060 587 aaPredicted RBP27.25■■□□□ 1.95
PBX4-202ENST00000557978 ADCY10Q96PN6 1610 aa27.25■■□□□ 1.95
PBX4-202ENST00000557978 P3H3Q8IVL6 736 aa27.21■■□□□ 1.95
PBX4-202ENST00000557978 UACAQ9BZF9 1416 aa27.2■■□□□ 1.95
PBX4-202ENST00000557978 NPM1P06748 294 aaKnown RBP eCLIP27.19■■□□□ 1.94
PBX4-202ENST00000557978 UHRF1BP1LA0JNW5 1464 aa27.17■■□□□ 1.94
PBX4-202ENST00000557978 ABCC2Q92887 1545 aa27.16■■□□□ 1.94
PBX4-202ENST00000557978 ABCA8O94911 1581 aa27.12■■□□□ 1.93
PBX4-202ENST00000557978 FHOD3Q2V2M9 1422 aa27.11■■□□□ 1.93
PBX4-202ENST00000557978 PLB1Q6P1J6 1458 aa27.1■■□□□ 1.93
PBX4-202ENST00000557978 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
PBX4-202ENST00000557978 MAPKBP1O60336 1514 aa27.06■■□□□ 1.92
PBX4-202ENST00000557978 RAPGEF6Q8TEU7 1601 aa27.06■■□□□ 1.92
PBX4-202ENST00000557978 KDM5BQ9UGL1 1544 aa27.04■■□□□ 1.92
PBX4-202ENST00000557978 ZCCHC11Q5TAX3 1644 aaKnown RBP27.04■■□□□ 1.92
PBX4-202ENST00000557978 TRHP20396 242 aaPredicted RBP27.02■■□□□ 1.92
PBX4-202ENST00000557978 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
PBX4-202ENST00000557978 CLIP1P30622 1438 aa26.99■■□□□ 1.91
PBX4-202ENST00000557978 FMN1Q68DA7 1419 aa26.99■■□□□ 1.91
PBX4-202ENST00000557978 KIF13AQ9H1H9 1805 aa26.97■■□□□ 1.91
PBX4-202ENST00000557978 CEP162Q5TB80 1403 aa26.91■■□□□ 1.9
PBX4-202ENST00000557978 ASXL2Q76L83 1435 aa26.91■■□□□ 1.9
PBX4-202ENST00000557978 NUP153P49790 1475 aaKnown RBP26.88■■□□□ 1.89
PBX4-202ENST00000557978 ABCC10Q5T3U5 1492 aa26.88■■□□□ 1.89
PBX4-202ENST00000557978 DIP2BQ9P265 1576 aa26.87■■□□□ 1.89
PBX4-202ENST00000557978 ATP10BO94823 1461 aa26.87■■□□□ 1.89
PBX4-202ENST00000557978 HECW1Q76N89 1606 aa26.87■■□□□ 1.89
PBX4-202ENST00000557978 ARID3CA6NKF2 412 aa26.82■■□□□ 1.88
PBX4-202ENST00000557978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.82■■□□□ 1.88
PBX4-202ENST00000557978 HNRNPUL2Q1KMD3 747 aaKnown RBP26.82■■□□□ 1.88
PBX4-202ENST00000557978 WDR7Q9Y4E6 1490 aa26.81■■□□□ 1.88
PBX4-202ENST00000557978 FAM69CQ0P6D2 419 aa26.81■■□□□ 1.88
PBX4-202ENST00000557978 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
PBX4-202ENST00000557978 PCF11O94913 1555 aaKnown RBP26.77■■□□□ 1.88
PBX4-202ENST00000557978 GLI2P10070 1586 aa26.77■■□□□ 1.88
PBX4-202ENST00000557978 CASKIN1Q8WXD9 1431 aa26.77■■□□□ 1.88
PBX4-202ENST00000557978 LRRIQ1Q96JM4 1722 aa26.77■■□□□ 1.88
PBX4-202ENST00000557978 TSPOAP1O95153 1857 aa26.76■■□□□ 1.87
PBX4-202ENST00000557978 EPRSP07814 1512 aaKnown RBP26.76■■□□□ 1.87
PBX4-202ENST00000557978 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
PBX4-202ENST00000557978 CDK13Q14004 1512 aaKnown RBP26.71■■□□□ 1.87
PBX4-202ENST00000557978 PLEKHD1A6NEE1 506 aa26.71■■□□□ 1.87
PBX4-202ENST00000557978 KCNH8Q96L42 1107 aa26.7■■□□□ 1.86
PBX4-202ENST00000557978 CCDC18Q5T9S5 1454 aa26.69■■□□□ 1.86
PBX4-202ENST00000557978 CFAP43Q8NDM7 1665 aa26.68■■□□□ 1.86
PBX4-202ENST00000557978 MAP3K4Q9Y6R4 1608 aa26.68■■□□□ 1.86
PBX4-202ENST00000557978 CDK11AQ9UQ88 783 aaPredicted RBP26.67■■□□□ 1.86
PBX4-202ENST00000557978 ABCA9Q8IUA7 1624 aa26.6■■□□□ 1.85
PBX4-202ENST00000557978 PPRC1Q5VV67 1664 aaKnown RBP26.6■■□□□ 1.85
PBX4-202ENST00000557978 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
PBX4-202ENST00000557978 CD109Q6YHK3 1445 aa26.55■■□□□ 1.84
PBX4-202ENST00000557978 TEX14Q8IWB6 1497 aa26.53■■□□□ 1.84
PBX4-202ENST00000557978 TROQ12816 1431 aaPredicted RBP26.52■■□□□ 1.84
PBX4-202ENST00000557978 KIF14Q15058 1648 aa26.51■■□□□ 1.83
PBX4-202ENST00000557978 MAGI3Q5TCQ9 1506 aa26.5■■□□□ 1.83
PBX4-202ENST00000557978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.49■■□□□ 1.83
PBX4-202ENST00000557978 TTC37Q6PGP7 1564 aa26.46■■□□□ 1.83
PBX4-202ENST00000557978 MYO5CQ9NQX4 1742 aa26.45■■□□□ 1.83
PBX4-202ENST00000557978 KDM6BO15054 1643 aa26.42■■□□□ 1.82
PBX4-202ENST00000557978 TIAM1Q13009 1591 aa26.42■■□□□ 1.82
PBX4-202ENST00000557978 MTUS2Q5JR59 1369 aa26.41■■□□□ 1.82
PBX4-202ENST00000557978 MAP3K1Q13233 1512 aa26.38■■□□□ 1.81
PBX4-202ENST00000557978 CFAP74Q9C0B2 1584 aa26.38■■□□□ 1.81
PBX4-202ENST00000557978 EHBP1L1Q8N3D4 1523 aa26.38■■□□□ 1.81
PBX4-202ENST00000557978 PHLDB1Q86UU1 1377 aa26.35■■□□□ 1.81
PBX4-202ENST00000557978 APLP2Q06481 763 aa26.35■■□□□ 1.81
PBX4-202ENST00000557978 NEO1Q92859 1461 aa26.34■■□□□ 1.81
PBX4-202ENST00000557978 ARAP3Q8WWN8 1544 aa26.33■■□□□ 1.81
PBX4-202ENST00000557978 PLCH2O75038 1416 aa26.33■■□□□ 1.81
PBX4-202ENST00000557978 CDC42BPAQ5VT25 1732 aa26.33■■□□□ 1.81
PBX4-202ENST00000557978 CDC42BPBQ9Y5S2 1711 aa26.33■■□□□ 1.81
PBX4-202ENST00000557978 SUPT6HQ7KZ85 1726 aaKnown RBP26.31■■□□□ 1.8
PBX4-202ENST00000557978 FANCAO15360 1455 aa26.3■■□□□ 1.8
PBX4-202ENST00000557978 PREX2Q70Z35 1606 aa26.3■■□□□ 1.8
PBX4-202ENST00000557978 LRRC9Q6ZRR7 1453 aa26.27■■□□□ 1.8
PBX4-202ENST00000557978 EFCAB2Q5VUJ9 269 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms