RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 WDR97A6NE52 1622 aa11.28□□□□□ -0.6
TRPM1-204ENST00000557948 RAD54L2Q9Y4B4 1467 aa11.28□□□□□ -0.6
TRPM1-204ENST00000557948 TOP2AP11388 1531 aaKnown RBP11.28□□□□□ -0.6
TRPM1-204ENST00000557948 SOGA1O94964 1423 aa11.26□□□□□ -0.61
TRPM1-204ENST00000557948 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
TRPM1-204ENST00000557948 GRIN2BQ13224 1484 aa11.25□□□□□ -0.61
TRPM1-204ENST00000557948 TSPOAP1O95153 1857 aa11.24□□□□□ -0.61
TRPM1-204ENST00000557948 CSRNP3Q8WYN3 585 aa11.23□□□□□ -0.61
TRPM1-204ENST00000557948 DIP2BQ9P265 1576 aa11.21□□□□□ -0.61
TRPM1-204ENST00000557948 ILDR2Q71H61 639 aa11.21□□□□□ -0.61
TRPM1-204ENST00000557948 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
TRPM1-204ENST00000557948 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
TRPM1-204ENST00000557948 SCAF1Q9H7N4 1312 aaKnown RBP11.2□□□□□ -0.62
TRPM1-204ENST00000557948 PBRM1Q86U86 1689 aa11.18□□□□□ -0.62
TRPM1-204ENST00000557948 NPM1P06748 294 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRPM1-204ENST00000557948 DISP3Q9P2K9 1392 aa11.17□□□□□ -0.62
TRPM1-204ENST00000557948 MAPK8IP2Q13387 824 aaPredicted RBP11.17□□□□□ -0.62
TRPM1-204ENST00000557948 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
TRPM1-204ENST00000557948 CCDC88BA6NC98 1476 aa11.15□□□□□ -0.62
TRPM1-204ENST00000557948 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
TRPM1-204ENST00000557948 FGD5Q6ZNL6 1462 aa11.13□□□□□ -0.63
TRPM1-204ENST00000557948 GRIN2AQ12879 1464 aa11.1□□□□□ -0.63
TRPM1-204ENST00000557948 NUP160Q12769 1436 aa11.07□□□□□ -0.64
TRPM1-204ENST00000557948 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
TRPM1-204ENST00000557948 PRG4Q92954 1404 aaPredicted RBP11.05□□□□□ -0.64
TRPM1-204ENST00000557948 ADCY10Q96PN6 1610 aa11.04□□□□□ -0.64
TRPM1-204ENST00000557948 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
TRPM1-204ENST00000557948 SPATA31D1Q6ZQQ2 1576 aa11□□□□□ -0.65
TRPM1-204ENST00000557948 PPRC1Q5VV67 1664 aaKnown RBP11□□□□□ -0.65
TRPM1-204ENST00000557948 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
TRPM1-204ENST00000557948 ZBTB22O15209 634 aa10.99□□□□□ -0.65
TRPM1-204ENST00000557948 CUX1P39880 1505 aa10.99□□□□□ -0.65
TRPM1-204ENST00000557948 JPH4Q96JJ6 628 aa10.97□□□□□ -0.65
TRPM1-204ENST00000557948 ABCA10Q8WWZ4 1543 aa10.95□□□□□ -0.66
TRPM1-204ENST00000557948 COL17A1Q9UMD9 1497 aaPredicted RBP10.95□□□□□ -0.66
TRPM1-204ENST00000557948 CERKQ8TCT0 537 aa10.93□□□□□ -0.66
TRPM1-204ENST00000557948 GLI2P10070 1586 aa10.93□□□□□ -0.66
TRPM1-204ENST00000557948 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
TRPM1-204ENST00000557948 RNF216Q9NWF9 866 aaPredicted RBP10.9□□□□□ -0.66
TRPM1-204ENST00000557948 TEX14Q8IWB6 1497 aa10.89□□□□□ -0.67
TRPM1-204ENST00000557948 PCF11O94913 1555 aaKnown RBP10.88□□□□□ -0.67
TRPM1-204ENST00000557948 PLB1Q6P1J6 1458 aa10.87□□□□□ -0.67
TRPM1-204ENST00000557948 ASXL2Q76L83 1435 aa10.86□□□□□ -0.67
TRPM1-204ENST00000557948 RUSC2Q8N2Y8 1516 aa10.86□□□□□ -0.67
TRPM1-204ENST00000557948 KIF21BO75037 1637 aa10.86□□□□□ -0.67
TRPM1-204ENST00000557948 MAP3K4Q9Y6R4 1608 aa10.86□□□□□ -0.67
TRPM1-204ENST00000557948 PTPRMP28827 1452 aa10.85□□□□□ -0.67
TRPM1-204ENST00000557948 ABCC2Q92887 1545 aa10.83□□□□□ -0.68
TRPM1-204ENST00000557948 DMRT2Q9Y5R5 561 aa10.82□□□□□ -0.68
TRPM1-204ENST00000557948 CUL7Q14999 1698 aa10.82□□□□□ -0.68
TRPM1-204ENST00000557948 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
TRPM1-204ENST00000557948 ADAMTSL3P82987 1691 aa10.79□□□□□ -0.68
TRPM1-204ENST00000557948 TTBK1Q5TCY1 1321 aaPredicted RBP10.79□□□□□ -0.68
TRPM1-204ENST00000557948 EPRSP07814 1512 aaKnown RBP10.79□□□□□ -0.68
TRPM1-204ENST00000557948 KIAA0586Q9BVV6 1533 aa10.79□□□□□ -0.68
TRPM1-204ENST00000557948 PTPRGP23470 1445 aa10.78□□□□□ -0.68
TRPM1-204ENST00000557948 WRNQ14191 1432 aaPredicted RBP eCLIP10.77□□□□□ -0.68
TRPM1-204ENST00000557948 HSPA2P54652 639 aa10.77□□□□□ -0.69
TRPM1-204ENST00000557948 FOXD4L1Q9NU39 408 aa10.77□□□□□ -0.69
TRPM1-204ENST00000557948 HOXD11P31277 338 aaPredicted RBP10.75□□□□□ -0.69
TRPM1-204ENST00000557948 MADDQ8WXG6 1647 aa10.72□□□□□ -0.69
TRPM1-204ENST00000557948 BCORL1Q5H9F3 1711 aa10.7□□□□□ -0.7
TRPM1-204ENST00000557948 UHRF1BP1LA0JNW5 1464 aa10.7□□□□□ -0.7
TRPM1-204ENST00000557948 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
TRPM1-204ENST00000557948 RIMS1Q86UR5 1692 aaKnown RBP10.68□□□□□ -0.7
TRPM1-204ENST00000557948 ARID4BQ4LE39 1312 aaPredicted RBP10.67□□□□□ -0.7
TRPM1-204ENST00000557948 ZCCHC11Q5TAX3 1644 aaKnown RBP10.67□□□□□ -0.7
TRPM1-204ENST00000557948 MAGI3Q5TCQ9 1506 aa10.67□□□□□ -0.7
TRPM1-204ENST00000557948 CARMIL2Q6F5E8 1435 aa10.67□□□□□ -0.7
TRPM1-204ENST00000557948 UACAQ9BZF9 1416 aa10.67□□□□□ -0.7
TRPM1-204ENST00000557948 CFAP43Q8NDM7 1665 aa10.66□□□□□ -0.7
TRPM1-204ENST00000557948 KDM5BQ9UGL1 1544 aa10.66□□□□□ -0.7
TRPM1-204ENST00000557948 CD109Q6YHK3 1445 aa10.66□□□□□ -0.7
TRPM1-204ENST00000557948 WDR7Q9Y4E6 1490 aa10.63□□□□□ -0.71
TRPM1-204ENST00000557948 BIVM-ERCC5R4GMW8 1640 aa10.62□□□□□ -0.71
TRPM1-204ENST00000557948 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
TRPM1-204ENST00000557948 ARAP3Q8WWN8 1544 aa10.62□□□□□ -0.71
TRPM1-204ENST00000557948 YEATS2Q9ULM3 1422 aa10.58□□□□□ -0.72
TRPM1-204ENST00000557948 KCNH8Q96L42 1107 aa10.58□□□□□ -0.72
TRPM1-204ENST00000557948 STRCQ7RTU9 1775 aa10.57□□□□□ -0.72
TRPM1-204ENST00000557948 IQSEC2Q5JU85 1478 aa10.56□□□□□ -0.72
TRPM1-204ENST00000557948 PREX1Q8TCU6 1659 aa10.55□□□□□ -0.72
TRPM1-204ENST00000557948 MED1Q15648 1581 aaPredicted RBP10.55□□□□□ -0.72
TRPM1-204ENST00000557948 RAPGEF3O95398 923 aa10.54□□□□□ -0.72
TRPM1-204ENST00000557948 IQGAP2Q13576 1575 aa10.52□□□□□ -0.73
TRPM1-204ENST00000557948 PHLDB1Q86UU1 1377 aa10.52□□□□□ -0.73
TRPM1-204ENST00000557948 POGZQ7Z3K3 1410 aa10.51□□□□□ -0.73
TRPM1-204ENST00000557948 FER1L4A9Z1Z3 1794 aa10.51□□□□□ -0.73
TRPM1-204ENST00000557948 LTBP4Q8N2S1 1624 aa10.51□□□□□ -0.73
TRPM1-204ENST00000557948 UBAP1LF5GYI3 381 aa10.5□□□□□ -0.73
TRPM1-204ENST00000557948 DISP1Q96F81 1524 aa10.49□□□□□ -0.73
TRPM1-204ENST00000557948 PTPRTO14522 1441 aa10.49□□□□□ -0.73
TRPM1-204ENST00000557948 FANCAO15360 1455 aa10.49□□□□□ -0.73
TRPM1-204ENST00000557948 ARHGEF40Q8TER5 1519 aa10.48□□□□□ -0.73
TRPM1-204ENST00000557948 TTC37Q6PGP7 1564 aa10.48□□□□□ -0.73
TRPM1-204ENST00000557948 FRMPD1Q5SYB0 1578 aa10.47□□□□□ -0.73
TRPM1-204ENST00000557948 IGF1RP08069 1367 aa10.46□□□□□ -0.74
TRPM1-204ENST00000557948 MLECQ14165 292 aa10.44□□□□□ -0.74
TRPM1-204ENST00000557948 NEO1Q92859 1461 aa10.43□□□□□ -0.74
TRPM1-204ENST00000557948 UHRF1BP1Q6BDS2 1440 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms