RNA–Protein interactions for RNA: ENST00000557920.1

KNSTRN-204, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-204ENST00000557920 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
KNSTRN-204ENST00000557920 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
KNSTRN-204ENST00000557920 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
KNSTRN-204ENST00000557920 CUL7Q14999 1698 aa18.6■□□□□ 0.57
KNSTRN-204ENST00000557920 CFAP43Q8NDM7 1665 aa18.59■□□□□ 0.57
KNSTRN-204ENST00000557920 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
KNSTRN-204ENST00000557920 SETD5Q9C0A6 1442 aa18.56■□□□□ 0.56
KNSTRN-204ENST00000557920 CASKIN1Q8WXD9 1431 aa18.52■□□□□ 0.56
KNSTRN-204ENST00000557920 MYT1Q01538 1121 aa18.52■□□□□ 0.56
KNSTRN-204ENST00000557920 TOPBP1Q92547 1522 aa18.5■□□□□ 0.55
KNSTRN-204ENST00000557920 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
KNSTRN-204ENST00000557920 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
KNSTRN-204ENST00000557920 LAMC3Q9Y6N6 1575 aa18.48■□□□□ 0.55
KNSTRN-204ENST00000557920 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
KNSTRN-204ENST00000557920 PCF11O94913 1555 aaKnown RBP18.44■□□□□ 0.54
KNSTRN-204ENST00000557920 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
KNSTRN-204ENST00000557920 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
KNSTRN-204ENST00000557920 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
KNSTRN-204ENST00000557920 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
KNSTRN-204ENST00000557920 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
KNSTRN-204ENST00000557920 YTHDC1Q96MU7 727 aaKnown RBP18.38■□□□□ 0.53
KNSTRN-204ENST00000557920 SAMD9Q5K651 1589 aa18.34■□□□□ 0.53
KNSTRN-204ENST00000557920 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
KNSTRN-204ENST00000557920 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
KNSTRN-204ENST00000557920 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
KNSTRN-204ENST00000557920 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
KNSTRN-204ENST00000557920 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
KNSTRN-204ENST00000557920 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
KNSTRN-204ENST00000557920 FGD6Q6ZV73 1430 aa18.31■□□□□ 0.52
KNSTRN-204ENST00000557920 ITGAEP38570 1179 aa18.28■□□□□ 0.52
KNSTRN-204ENST00000557920 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
KNSTRN-204ENST00000557920 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.51
KNSTRN-204ENST00000557920 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
KNSTRN-204ENST00000557920 HFM1A2PYH4 1435 aa18.26■□□□□ 0.51
KNSTRN-204ENST00000557920 EHBP1L1Q8N3D4 1523 aa18.26■□□□□ 0.51
KNSTRN-204ENST00000557920 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
KNSTRN-204ENST00000557920 GRIN2BQ13224 1484 aa18.25■□□□□ 0.51
KNSTRN-204ENST00000557920 MTUS2Q5JR59 1369 aa18.24■□□□□ 0.51
KNSTRN-204ENST00000557920 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
KNSTRN-204ENST00000557920 PPP1R15AO75807 674 aaPredicted RBP18.22■□□□□ 0.51
KNSTRN-204ENST00000557920 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
KNSTRN-204ENST00000557920 AKNAQ7Z591 1439 aa18.21■□□□□ 0.51
KNSTRN-204ENST00000557920 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
KNSTRN-204ENST00000557920 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
KNSTRN-204ENST00000557920 NESP48681 1621 aa18.2■□□□□ 0.5
KNSTRN-204ENST00000557920 ARHGEF11O15085 1522 aa18.18■□□□□ 0.5
KNSTRN-204ENST00000557920 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
KNSTRN-204ENST00000557920 TCOF1Q13428 1488 aaKnown RBP18.16■□□□□ 0.5
KNSTRN-204ENST00000557920 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
KNSTRN-204ENST00000557920 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
KNSTRN-204ENST00000557920 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
KNSTRN-204ENST00000557920 UGGT2Q9NYU1 1516 aa18.15■□□□□ 0.5
KNSTRN-204ENST00000557920 MIA2Q96PC5 1412 aa18.14■□□□□ 0.49
KNSTRN-204ENST00000557920 TARBP1Q13395 1621 aaKnown RBP18.13■□□□□ 0.49
KNSTRN-204ENST00000557920 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
KNSTRN-204ENST00000557920 TONSLQ96HA7 1378 aa18.13■□□□□ 0.49
KNSTRN-204ENST00000557920 NAIPQ13075 1403 aa18.11■□□□□ 0.49
KNSTRN-204ENST00000557920 TDRD9Q8NDG6 1382 aaKnown RBP18.1■□□□□ 0.49
KNSTRN-204ENST00000557920 SIN3AQ96ST3 1273 aa18.09■□□□□ 0.49
KNSTRN-204ENST00000557920 SUPT16HQ9Y5B9 1047 aaKnown RBP18.09■□□□□ 0.49
KNSTRN-204ENST00000557920 IQGAP2Q13576 1575 aa18.05■□□□□ 0.48
KNSTRN-204ENST00000557920 ANP32CO43423 234 aa18.05■□□□□ 0.48
KNSTRN-204ENST00000557920 GCC2Q8IWJ2 1684 aa18.05■□□□□ 0.48
KNSTRN-204ENST00000557920 PTPRKQ15262 1439 aa18.04■□□□□ 0.48
KNSTRN-204ENST00000557920 LRRIQ1Q96JM4 1722 aa18.03■□□□□ 0.48
KNSTRN-204ENST00000557920 ADAMTS12P58397 1594 aa18.03■□□□□ 0.48
KNSTRN-204ENST00000557920 PBRM1Q86U86 1689 aa18.02■□□□□ 0.47
KNSTRN-204ENST00000557920 DDX10Q13206 875 aaKnown RBP18.01■□□□□ 0.47
KNSTRN-204ENST00000557920 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
KNSTRN-204ENST00000557920 EPRSP07814 1512 aaKnown RBP18■□□□□ 0.47
KNSTRN-204ENST00000557920 ROCK1Q13464 1354 aa18■□□□□ 0.47
KNSTRN-204ENST00000557920 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
KNSTRN-204ENST00000557920 WDR62O43379 1518 aa17.97■□□□□ 0.47
KNSTRN-204ENST00000557920 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
KNSTRN-204ENST00000557920 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
KNSTRN-204ENST00000557920 KDM5BQ9UGL1 1544 aa17.92■□□□□ 0.46
KNSTRN-204ENST00000557920 NEFLP07196 543 aa17.9■□□□□ 0.46
KNSTRN-204ENST00000557920 CDK11AQ9UQ88 783 aaPredicted RBP17.9■□□□□ 0.46
KNSTRN-204ENST00000557920 KIAA0556O60303 1618 aa17.84■□□□□ 0.45
KNSTRN-204ENST00000557920 DNMT1P26358 1616 aaKnown RBP17.84■□□□□ 0.45
KNSTRN-204ENST00000557920 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.44
KNSTRN-204ENST00000557920 ERICH6BQ5W0A0 696 aa17.83■□□□□ 0.44
KNSTRN-204ENST00000557920 DAPK1P53355 1430 aa17.82■□□□□ 0.44
KNSTRN-204ENST00000557920 MPHOSPH9Q99550 1183 aa17.82■□□□□ 0.44
KNSTRN-204ENST00000557920 KCNH8Q96L42 1107 aa17.81■□□□□ 0.44
KNSTRN-204ENST00000557920 DENND4BO75064 1496 aaPredicted RBP17.8■□□□□ 0.44
KNSTRN-204ENST00000557920 RPRD2Q5VT52 1461 aaKnown RBP17.8■□□□□ 0.44
KNSTRN-204ENST00000557920 RAPGEF6Q8TEU7 1601 aa17.8■□□□□ 0.44
KNSTRN-204ENST00000557920 DISP1Q96F81 1524 aa17.79■□□□□ 0.44
KNSTRN-204ENST00000557920 CDK13Q14004 1512 aaKnown RBP17.78■□□□□ 0.44
KNSTRN-204ENST00000557920 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
KNSTRN-204ENST00000557920 TRIM52Q96A61 297 aa17.78■□□□□ 0.44
KNSTRN-204ENST00000557920 RRP7BPQ9NSQ0 103 aa17.78■□□□□ 0.44
KNSTRN-204ENST00000557920 ANKRD30BQ9BXX2 1392 aa17.78■□□□□ 0.44
KNSTRN-204ENST00000557920 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
KNSTRN-204ENST00000557920 TSHZ2Q9NRE2 1034 aa17.77■□□□□ 0.44
KNSTRN-204ENST00000557920 ABCC5O15440 1437 aa17.77■□□□□ 0.44
KNSTRN-204ENST00000557920 TROQ12816 1431 aaPredicted RBP17.76■□□□□ 0.43
KNSTRN-204ENST00000557920 CNTLNQ9NXG0 1405 aa17.76■□□□□ 0.43
KNSTRN-204ENST00000557920 ITSN2Q9NZM3 1697 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms