RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 RAPGEF2Q9Y4G8 1499 aa38.46■■■■□ 3.75
SIX4-203ENST00000556952 RIMBP3CA6NJZ7 1639 aa38.4■■■■□ 3.74
SIX4-203ENST00000556952 RIMBP3BA6NNM3 1639 aa38.4■■■■□ 3.74
SIX4-203ENST00000556952 RIMBP3Q9UFD9 1639 aa38.4■■■■□ 3.74
SIX4-203ENST00000556952 EHMT2Q96KQ7 1210 aa38.4■■■■□ 3.74
SIX4-203ENST00000556952 ARHGEF11O15085 1522 aa38.38■■■■□ 3.73
SIX4-203ENST00000556952 TNIKQ9UKE5 1360 aa38.33■■■■□ 3.73
SIX4-203ENST00000556952 UBTFP17480 764 aaKnown RBP38.27■■■■□ 3.72
SIX4-203ENST00000556952 SHROOM2Q13796 1616 aa38.26■■■■□ 3.71
SIX4-203ENST00000556952 KIAA0586Q9BVV6 1533 aa38.19■■■■□ 3.7
SIX4-203ENST00000556952 ERCC6L2Q5T890 1561 aa38.16■■■■□ 3.7
SIX4-203ENST00000556952 ARAP1Q96P48 1450 aa38.1■■■■□ 3.69
SIX4-203ENST00000556952 CTTNBP2Q8WZ74 1663 aa38.09■■■■□ 3.69
SIX4-203ENST00000556952 CEP162Q5TB80 1403 aa38.07■■■■□ 3.68
SIX4-203ENST00000556952 IQGAP2Q13576 1575 aa38.07■■■■□ 3.68
SIX4-203ENST00000556952 JPH4Q96JJ6 628 aa38.06■■■■□ 3.68
SIX4-203ENST00000556952 PRG4Q92954 1404 aaPredicted RBP38.03■■■■□ 3.68
SIX4-203ENST00000556952 CYB5RLQ6IPT4 315 aa37.93■■■■□ 3.66
SIX4-203ENST00000556952 CLIP1P30622 1438 aa37.89■■■■□ 3.66
SIX4-203ENST00000556952 UGGT2Q9NYU1 1516 aa37.85■■■■□ 3.65
SIX4-203ENST00000556952 DISP1Q96F81 1524 aa37.79■■■■□ 3.64
SIX4-203ENST00000556952 CARMIL2Q6F5E8 1435 aa37.73■■■■□ 3.63
SIX4-203ENST00000556952 KIAA0556O60303 1618 aa37.73■■■■□ 3.63
SIX4-203ENST00000556952 EFCAB5A4FU69 1503 aa37.71■■■■□ 3.63
SIX4-203ENST00000556952 ARHGAP35Q9NRY4 1499 aa37.68■■■■□ 3.62
SIX4-203ENST00000556952 RANGAP1P46060 587 aaPredicted RBP37.65■■■■□ 3.62
SIX4-203ENST00000556952 SAMD9Q5K651 1589 aa37.62■■■■□ 3.61
SIX4-203ENST00000556952 PTPRGP23470 1445 aa37.56■■■■□ 3.6
SIX4-203ENST00000556952 TTBK1Q5TCY1 1321 aaPredicted RBP37.56■■■■□ 3.6
SIX4-203ENST00000556952 VPS8Q8N3P4 1428 aa37.53■■■■□ 3.6
SIX4-203ENST00000556952 ADCY10Q96PN6 1610 aa37.5■■■■□ 3.59
SIX4-203ENST00000556952 P3H3Q8IVL6 736 aa37.43■■■■□ 3.58
SIX4-203ENST00000556952 FHOD3Q2V2M9 1422 aa37.38■■■■□ 3.57
SIX4-203ENST00000556952 UACAQ9BZF9 1416 aa37.35■■■■□ 3.57
SIX4-203ENST00000556952 ABCC2Q92887 1545 aa37.32■■■■□ 3.56
SIX4-203ENST00000556952 PLB1Q6P1J6 1458 aa37.3■■■■□ 3.56
SIX4-203ENST00000556952 UHRF1BP1LA0JNW5 1464 aa37.3■■■■□ 3.56
SIX4-203ENST00000556952 FMN1Q68DA7 1419 aa37.29■■■■□ 3.56
SIX4-203ENST00000556952 ABCA8O94911 1581 aa37.29■■■■□ 3.56
SIX4-203ENST00000556952 PCF11O94913 1555 aaKnown RBP37.21■■■■□ 3.55
SIX4-203ENST00000556952 FYCO1Q9BQS8 1478 aa37.17■■■■□ 3.54
SIX4-203ENST00000556952 NPM1P06748 294 aaKnown RBP eCLIP37.16■■■■□ 3.54
SIX4-203ENST00000556952 ZCCHC11Q5TAX3 1644 aaKnown RBP37.15■■■■□ 3.54
SIX4-203ENST00000556952 MAPKBP1O60336 1514 aa37.15■■■■□ 3.54
SIX4-203ENST00000556952 RAPGEF6Q8TEU7 1601 aa37.14■■■■□ 3.54
SIX4-203ENST00000556952 KDM5BQ9UGL1 1544 aa37.14■■■■□ 3.54
SIX4-203ENST00000556952 CASKIN1Q8WXD9 1431 aa37.14■■■■□ 3.54
SIX4-203ENST00000556952 TRHP20396 242 aaPredicted RBP37.06■■■■□ 3.52
SIX4-203ENST00000556952 APLP2Q06481 763 aa37.05■■■■□ 3.52
SIX4-203ENST00000556952 MAP3K1Q13233 1512 aa37.04■■■■□ 3.52
SIX4-203ENST00000556952 KIF13AQ9H1H9 1805 aa37.03■■■■□ 3.52
SIX4-203ENST00000556952 HECW1Q76N89 1606 aa37.02■■■■□ 3.52
SIX4-203ENST00000556952 CFAP43Q8NDM7 1665 aa37.02■■■■□ 3.52
SIX4-203ENST00000556952 NUP153P49790 1475 aaKnown RBP36.99■■■■□ 3.51
SIX4-203ENST00000556952 ASXL2Q76L83 1435 aa36.98■■■■□ 3.51
SIX4-203ENST00000556952 TIAM1Q13009 1591 aa36.98■■■■□ 3.51
SIX4-203ENST00000556952 ARID3CA6NKF2 412 aa36.97■■■■□ 3.51
SIX4-203ENST00000556952 DIP2BQ9P265 1576 aa36.95■■■■□ 3.51
SIX4-203ENST00000556952 LRRIQ1Q96JM4 1722 aa36.94■■■■□ 3.5
SIX4-203ENST00000556952 ATP10BO94823 1461 aa36.94■■■■□ 3.5
SIX4-203ENST00000556952 ABCC10Q5T3U5 1492 aa36.93■■■■□ 3.5
SIX4-203ENST00000556952 CCDC18Q5T9S5 1454 aa36.89■■■■□ 3.5
SIX4-203ENST00000556952 ATP1B4Q9UN42 357 aaPredicted RBP36.85■■■■□ 3.49
SIX4-203ENST00000556952 WDR7Q9Y4E6 1490 aa36.84■■■■□ 3.49
SIX4-203ENST00000556952 FAM69CQ0P6D2 419 aa36.8■■■■□ 3.48
SIX4-203ENST00000556952 PPARGC1BQ86YN6 1023 aaKnown RBP36.8■■■■□ 3.48
SIX4-203ENST00000556952 EPRSP07814 1512 aaKnown RBP36.8■■■■□ 3.48
SIX4-203ENST00000556952 CDK13Q14004 1512 aaKnown RBP36.8■■■■□ 3.48
SIX4-203ENST00000556952 LRRC9Q6ZRR7 1453 aa36.77■■■■□ 3.48
SIX4-203ENST00000556952 GLI2P10070 1586 aa36.74■■■■□ 3.47
SIX4-203ENST00000556952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.74■■■■□ 3.47
SIX4-203ENST00000556952 HNRNPUL2Q1KMD3 747 aaKnown RBP36.74■■■■□ 3.47
SIX4-203ENST00000556952 KANK4Q5T7N3 995 aaPredicted RBP36.7■■■■□ 3.47
SIX4-203ENST00000556952 TSPOAP1O95153 1857 aa36.69■■■■□ 3.46
SIX4-203ENST00000556952 EHBP1L1Q8N3D4 1523 aa36.64■■■■□ 3.46
SIX4-203ENST00000556952 MAP3K4Q9Y6R4 1608 aa36.64■■■■□ 3.46
SIX4-203ENST00000556952 KCNH8Q96L42 1107 aa36.64■■■■□ 3.46
SIX4-203ENST00000556952 TRIM26Q12899 539 aaPredicted RBP36.62■■■■□ 3.45
SIX4-203ENST00000556952 PPRC1Q5VV67 1664 aaKnown RBP36.6■■■■□ 3.45
SIX4-203ENST00000556952 MTUS2Q5JR59 1369 aa36.58■■■■□ 3.45
SIX4-203ENST00000556952 MAGI3Q5TCQ9 1506 aa36.55■■■■□ 3.44
SIX4-203ENST00000556952 PLEKHD1A6NEE1 506 aa36.55■■■■□ 3.44
SIX4-203ENST00000556952 SUPT6HQ7KZ85 1726 aaKnown RBP36.53■■■■□ 3.44
SIX4-203ENST00000556952 ABCA9Q8IUA7 1624 aa36.52■■■■□ 3.44
SIX4-203ENST00000556952 CDK11AQ9UQ88 783 aaPredicted RBP36.49■■■■□ 3.43
SIX4-203ENST00000556952 CD109Q6YHK3 1445 aa36.44■■■■□ 3.42
SIX4-203ENST00000556952 KIF14Q15058 1648 aa36.43■■■■□ 3.42
SIX4-203ENST00000556952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.43■■■■□ 3.42
SIX4-203ENST00000556952 TROQ12816 1431 aaPredicted RBP36.43■■■■□ 3.42
SIX4-203ENST00000556952 TTC37Q6PGP7 1564 aa36.42■■■■□ 3.42
SIX4-203ENST00000556952 NCOA2Q15596 1464 aa36.39■■■■□ 3.42
SIX4-203ENST00000556952 PCGF6Q9BYE7 350 aa36.36■■■■□ 3.41
SIX4-203ENST00000556952 TEX14Q8IWB6 1497 aa36.34■■■■□ 3.41
SIX4-203ENST00000556952 RRBP1Q9P2E9 1410 aaKnown RBP36.32■■■■□ 3.41
SIX4-203ENST00000556952 PHLDB1Q86UU1 1377 aa36.32■■■■□ 3.41
SIX4-203ENST00000556952 KDM6BO15054 1643 aa36.28■■■■□ 3.4
SIX4-203ENST00000556952 MYO5CQ9NQX4 1742 aa36.25■■■■□ 3.39
SIX4-203ENST00000556952 MYOM3Q5VTT5 1437 aa36.22■■■■□ 3.39
SIX4-203ENST00000556952 CCNB3Q8WWL7 1395 aa36.2■■■■□ 3.39
SIX4-203ENST00000556952 ITSN2Q9NZM3 1697 aa36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms