RNA–Protein interactions for RNA: ENST00000556863.1

CIPC-207, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 3

Gene CIPC, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-207ENST00000556863 GOLGA3Q08378 1498 aa23.51■■□□□ 1.35
CIPC-207ENST00000556863 KIAA0586Q9BVV6 1533 aa23.46■■□□□ 1.35
CIPC-207ENST00000556863 IQGAP2Q13576 1575 aa23.44■■□□□ 1.34
CIPC-207ENST00000556863 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
CIPC-207ENST00000556863 UBTFP17480 764 aaKnown RBP23.37■■□□□ 1.33
CIPC-207ENST00000556863 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
CIPC-207ENST00000556863 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
CIPC-207ENST00000556863 JPH4Q96JJ6 628 aa23.31■■□□□ 1.32
CIPC-207ENST00000556863 UGGT2Q9NYU1 1516 aa23.3■■□□□ 1.32
CIPC-207ENST00000556863 RIMBP3CA6NJZ7 1639 aa23.3■■□□□ 1.32
CIPC-207ENST00000556863 RIMBP3BA6NNM3 1639 aa23.3■■□□□ 1.32
CIPC-207ENST00000556863 RIMBP3Q9UFD9 1639 aa23.3■■□□□ 1.32
CIPC-207ENST00000556863 ARHGEF11O15085 1522 aa23.29■■□□□ 1.32
CIPC-207ENST00000556863 PRG4Q92954 1404 aaPredicted RBP23.29■■□□□ 1.32
CIPC-207ENST00000556863 DNAJC5Q9H3Z4 198 aa23.27■■□□□ 1.32
CIPC-207ENST00000556863 RANGAP1P46060 587 aaPredicted RBP23.26■■□□□ 1.31
CIPC-207ENST00000556863 TNIKQ9UKE5 1360 aa23.26■■□□□ 1.31
CIPC-207ENST00000556863 DISP1Q96F81 1524 aa23.24■■□□□ 1.31
CIPC-207ENST00000556863 KIAA0556O60303 1618 aa23.24■■□□□ 1.31
CIPC-207ENST00000556863 SAMD9Q5K651 1589 aa23.23■■□□□ 1.31
CIPC-207ENST00000556863 CARMIL2Q6F5E8 1435 aa23.16■■□□□ 1.3
CIPC-207ENST00000556863 ARAP1Q96P48 1450 aa23.15■■□□□ 1.3
CIPC-207ENST00000556863 EFCAB5A4FU69 1503 aa23.14■■□□□ 1.3
CIPC-207ENST00000556863 ARHGAP35Q9NRY4 1499 aa23.13■■□□□ 1.29
CIPC-207ENST00000556863 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
CIPC-207ENST00000556863 CEP162Q5TB80 1403 aa23.11■■□□□ 1.29
CIPC-207ENST00000556863 CLIP1P30622 1438 aa23.1■■□□□ 1.29
CIPC-207ENST00000556863 TTBK1Q5TCY1 1321 aaPredicted RBP23.09■■□□□ 1.29
CIPC-207ENST00000556863 FHOD3Q2V2M9 1422 aa23.09■■□□□ 1.29
CIPC-207ENST00000556863 PTPRGP23470 1445 aa23.03■■□□□ 1.28
CIPC-207ENST00000556863 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
CIPC-207ENST00000556863 PLB1Q6P1J6 1458 aa22.95■■□□□ 1.26
CIPC-207ENST00000556863 ADCY10Q96PN6 1610 aa22.95■■□□□ 1.26
CIPC-207ENST00000556863 ABCA8O94911 1581 aa22.93■■□□□ 1.26
CIPC-207ENST00000556863 RAPGEF6Q8TEU7 1601 aa22.92■■□□□ 1.26
CIPC-207ENST00000556863 UACAQ9BZF9 1416 aa22.91■■□□□ 1.26
CIPC-207ENST00000556863 ABCC2Q92887 1545 aa22.9■■□□□ 1.26
CIPC-207ENST00000556863 FMN1Q68DA7 1419 aa22.89■■□□□ 1.25
CIPC-207ENST00000556863 PCF11O94913 1555 aaKnown RBP22.89■■□□□ 1.25
CIPC-207ENST00000556863 UHRF1BP1LA0JNW5 1464 aa22.85■■□□□ 1.25
CIPC-207ENST00000556863 LRRIQ1Q96JM4 1722 aa22.82■■□□□ 1.24
CIPC-207ENST00000556863 HECW1Q76N89 1606 aa22.82■■□□□ 1.24
CIPC-207ENST00000556863 NUP153P49790 1475 aaKnown RBP22.81■■□□□ 1.24
CIPC-207ENST00000556863 ZCCHC11Q5TAX3 1644 aaKnown RBP22.8■■□□□ 1.24
CIPC-207ENST00000556863 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
CIPC-207ENST00000556863 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
CIPC-207ENST00000556863 CASKIN1Q8WXD9 1431 aa22.78■■□□□ 1.24
CIPC-207ENST00000556863 FYCO1Q9BQS8 1478 aa22.77■■□□□ 1.24
CIPC-207ENST00000556863 KDM5BQ9UGL1 1544 aa22.76■■□□□ 1.23
CIPC-207ENST00000556863 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
CIPC-207ENST00000556863 CDK13Q14004 1512 aaKnown RBP22.74■■□□□ 1.23
CIPC-207ENST00000556863 ATP10BO94823 1461 aa22.73■■□□□ 1.23
CIPC-207ENST00000556863 EPRSP07814 1512 aaKnown RBP22.71■■□□□ 1.23
CIPC-207ENST00000556863 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.22
CIPC-207ENST00000556863 MAPKBP1O60336 1514 aa22.65■■□□□ 1.22
CIPC-207ENST00000556863 CCDC18Q5T9S5 1454 aa22.65■■□□□ 1.22
CIPC-207ENST00000556863 CFAP43Q8NDM7 1665 aa22.65■■□□□ 1.22
CIPC-207ENST00000556863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.63■■□□□ 1.21
CIPC-207ENST00000556863 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
CIPC-207ENST00000556863 ASXL2Q76L83 1435 aa22.63■■□□□ 1.21
CIPC-207ENST00000556863 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
CIPC-207ENST00000556863 MAGI3Q5TCQ9 1506 aa22.58■■□□□ 1.21
CIPC-207ENST00000556863 WDR7Q9Y4E6 1490 aa22.57■■□□□ 1.2
CIPC-207ENST00000556863 DIP2BQ9P265 1576 aa22.53■■□□□ 1.2
CIPC-207ENST00000556863 KIF13AQ9H1H9 1805 aa22.52■■□□□ 1.2
CIPC-207ENST00000556863 MAP3K1Q13233 1512 aa22.5■■□□□ 1.19
CIPC-207ENST00000556863 KIF14Q15058 1648 aa22.49■■□□□ 1.19
CIPC-207ENST00000556863 PLEKHD1A6NEE1 506 aa22.49■■□□□ 1.19
CIPC-207ENST00000556863 TROQ12816 1431 aaPredicted RBP22.48■■□□□ 1.19
CIPC-207ENST00000556863 ABCC10Q5T3U5 1492 aa22.48■■□□□ 1.19
CIPC-207ENST00000556863 EHBP1L1Q8N3D4 1523 aa22.47■■□□□ 1.19
CIPC-207ENST00000556863 KCNH8Q96L42 1107 aa22.47■■□□□ 1.19
CIPC-207ENST00000556863 CDK11AQ9UQ88 783 aaPredicted RBP22.46■■□□□ 1.19
CIPC-207ENST00000556863 LRRC9Q6ZRR7 1453 aa22.45■■□□□ 1.18
CIPC-207ENST00000556863 APLP2Q06481 763 aa22.44■■□□□ 1.18
CIPC-207ENST00000556863 MTUS2Q5JR59 1369 aa22.44■■□□□ 1.18
CIPC-207ENST00000556863 GLI2P10070 1586 aa22.43■■□□□ 1.18
CIPC-207ENST00000556863 TTC37Q6PGP7 1564 aa22.43■■□□□ 1.18
CIPC-207ENST00000556863 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
CIPC-207ENST00000556863 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.18
CIPC-207ENST00000556863 ABCA9Q8IUA7 1624 aa22.41■■□□□ 1.18
CIPC-207ENST00000556863 MAP3K4Q9Y6R4 1608 aa22.4■■□□□ 1.18
CIPC-207ENST00000556863 TRHP20396 242 aaPredicted RBP22.4■■□□□ 1.18
CIPC-207ENST00000556863 FAM69CQ0P6D2 419 aa22.4■■□□□ 1.18
CIPC-207ENST00000556863 SUPT6HQ7KZ85 1726 aaKnown RBP22.39■■□□□ 1.17
CIPC-207ENST00000556863 TSPOAP1O95153 1857 aa22.38■■□□□ 1.17
CIPC-207ENST00000556863 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
CIPC-207ENST00000556863 PPRC1Q5VV67 1664 aaKnown RBP22.34■■□□□ 1.17
CIPC-207ENST00000556863 MYO5CQ9NQX4 1742 aa22.34■■□□□ 1.17
CIPC-207ENST00000556863 NCOA2Q15596 1464 aa22.33■■□□□ 1.16
CIPC-207ENST00000556863 CDC42BPAQ5VT25 1732 aa22.32■■□□□ 1.16
CIPC-207ENST00000556863 CD109Q6YHK3 1445 aa22.3■■□□□ 1.16
CIPC-207ENST00000556863 PREX2Q70Z35 1606 aa22.29■■□□□ 1.16
CIPC-207ENST00000556863 CDC42BPBQ9Y5S2 1711 aa22.28■■□□□ 1.16
CIPC-207ENST00000556863 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
CIPC-207ENST00000556863 CCNB3Q8WWL7 1395 aa22.25■■□□□ 1.15
CIPC-207ENST00000556863 GPATCH8Q9UKJ3 1502 aaKnown RBP22.24■■□□□ 1.15
CIPC-207ENST00000556863 PLCH2O75038 1416 aa22.23■■□□□ 1.15
CIPC-207ENST00000556863 ARHGAP5Q13017 1502 aa22.21■■□□□ 1.15
CIPC-207ENST00000556863 PHLDB1Q86UU1 1377 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms