RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
ABCD4-225ENST00000556517 CTTNBP2Q8WZ74 1663 aa20.3■□□□□ 0.84
ABCD4-225ENST00000556517 IQGAP2Q13576 1575 aa20.29■□□□□ 0.84
ABCD4-225ENST00000556517 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
ABCD4-225ENST00000556517 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
ABCD4-225ENST00000556517 TNIKQ9UKE5 1360 aa20.21■□□□□ 0.83
ABCD4-225ENST00000556517 JPH4Q96JJ6 628 aa20.19■□□□□ 0.82
ABCD4-225ENST00000556517 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
ABCD4-225ENST00000556517 UGGT2Q9NYU1 1516 aa20.16■□□□□ 0.82
ABCD4-225ENST00000556517 RANGAP1P46060 587 aaPredicted RBP20.15■□□□□ 0.82
ABCD4-225ENST00000556517 CARMIL2Q6F5E8 1435 aa20.14■□□□□ 0.81
ABCD4-225ENST00000556517 PRG4Q92954 1404 aaPredicted RBP20.14■□□□□ 0.81
ABCD4-225ENST00000556517 EFCAB5A4FU69 1503 aa20.1■□□□□ 0.81
ABCD4-225ENST00000556517 CLIP1P30622 1438 aa20.08■□□□□ 0.8
ABCD4-225ENST00000556517 CEP162Q5TB80 1403 aa20.08■□□□□ 0.8
ABCD4-225ENST00000556517 KIAA0556O60303 1618 aa20.06■□□□□ 0.8
ABCD4-225ENST00000556517 DISP1Q96F81 1524 aa20.06■□□□□ 0.8
ABCD4-225ENST00000556517 SAMD9Q5K651 1589 aa20.05■□□□□ 0.8
ABCD4-225ENST00000556517 ARHGEF11O15085 1522 aa20.05■□□□□ 0.8
ABCD4-225ENST00000556517 ERCC6L2Q5T890 1561 aa20.01■□□□□ 0.79
ABCD4-225ENST00000556517 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
ABCD4-225ENST00000556517 ARHGAP35Q9NRY4 1499 aa20■□□□□ 0.79
ABCD4-225ENST00000556517 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
ABCD4-225ENST00000556517 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
ABCD4-225ENST00000556517 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
ABCD4-225ENST00000556517 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
ABCD4-225ENST00000556517 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
ABCD4-225ENST00000556517 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-225ENST00000556517 PTPRGP23470 1445 aa19.96■□□□□ 0.79
ABCD4-225ENST00000556517 FMN1Q68DA7 1419 aa19.93■□□□□ 0.78
ABCD4-225ENST00000556517 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
ABCD4-225ENST00000556517 CYB5RLQ6IPT4 315 aa19.85■□□□□ 0.77
ABCD4-225ENST00000556517 UACAQ9BZF9 1416 aa19.83■□□□□ 0.76
ABCD4-225ENST00000556517 PLB1Q6P1J6 1458 aa19.82■□□□□ 0.76
ABCD4-225ENST00000556517 VPS8Q8N3P4 1428 aa19.81■□□□□ 0.76
ABCD4-225ENST00000556517 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
ABCD4-225ENST00000556517 ABCA8O94911 1581 aa19.79■□□□□ 0.76
ABCD4-225ENST00000556517 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
ABCD4-225ENST00000556517 ABCC2Q92887 1545 aa19.79■□□□□ 0.76
ABCD4-225ENST00000556517 UHRF1BP1LA0JNW5 1464 aa19.78■□□□□ 0.76
ABCD4-225ENST00000556517 FYCO1Q9BQS8 1478 aa19.78■□□□□ 0.76
ABCD4-225ENST00000556517 CASKIN1Q8WXD9 1431 aa19.77■□□□□ 0.76
ABCD4-225ENST00000556517 HECW1Q76N89 1606 aa19.77■□□□□ 0.76
ABCD4-225ENST00000556517 PCF11O94913 1555 aaKnown RBP19.77■□□□□ 0.76
ABCD4-225ENST00000556517 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
ABCD4-225ENST00000556517 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
ABCD4-225ENST00000556517 NUP153P49790 1475 aaKnown RBP19.72■□□□□ 0.75
ABCD4-225ENST00000556517 CCDC18Q5T9S5 1454 aa19.69■□□□□ 0.74
ABCD4-225ENST00000556517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
ABCD4-225ENST00000556517 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
ABCD4-225ENST00000556517 ARID3CA6NKF2 412 aa19.68■□□□□ 0.74
ABCD4-225ENST00000556517 KDM5BQ9UGL1 1544 aa19.67■□□□□ 0.74
ABCD4-225ENST00000556517 APLP2Q06481 763 aa19.67■□□□□ 0.74
ABCD4-225ENST00000556517 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
ABCD4-225ENST00000556517 ZCCHC11Q5TAX3 1644 aaKnown RBP19.64■□□□□ 0.73
ABCD4-225ENST00000556517 ATP10BO94823 1461 aa19.63■□□□□ 0.73
ABCD4-225ENST00000556517 CDK13Q14004 1512 aaKnown RBP19.62■□□□□ 0.73
ABCD4-225ENST00000556517 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
ABCD4-225ENST00000556517 PLEKHD1A6NEE1 506 aa19.57■□□□□ 0.72
ABCD4-225ENST00000556517 TIAM1Q13009 1591 aa19.57■□□□□ 0.72
ABCD4-225ENST00000556517 LRRIQ1Q96JM4 1722 aa19.56■□□□□ 0.72
ABCD4-225ENST00000556517 MAPKBP1O60336 1514 aa19.56■□□□□ 0.72
ABCD4-225ENST00000556517 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
ABCD4-225ENST00000556517 CFAP43Q8NDM7 1665 aa19.56■□□□□ 0.72
ABCD4-225ENST00000556517 ASXL2Q76L83 1435 aa19.55■□□□□ 0.72
ABCD4-225ENST00000556517 WDR7Q9Y4E6 1490 aa19.54■□□□□ 0.72
ABCD4-225ENST00000556517 MTUS2Q5JR59 1369 aa19.53■□□□□ 0.72
ABCD4-225ENST00000556517 EHBP1L1Q8N3D4 1523 aa19.5■□□□□ 0.71
ABCD4-225ENST00000556517 TROQ12816 1431 aaPredicted RBP19.5■□□□□ 0.71
ABCD4-225ENST00000556517 LRRC9Q6ZRR7 1453 aa19.48■□□□□ 0.71
ABCD4-225ENST00000556517 KIF14Q15058 1648 aa19.46■□□□□ 0.71
ABCD4-225ENST00000556517 KCNH8Q96L42 1107 aa19.45■□□□□ 0.7
ABCD4-225ENST00000556517 MAGI3Q5TCQ9 1506 aa19.45■□□□□ 0.7
ABCD4-225ENST00000556517 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
ABCD4-225ENST00000556517 ABCC10Q5T3U5 1492 aa19.41■□□□□ 0.7
ABCD4-225ENST00000556517 SUPT6HQ7KZ85 1726 aaKnown RBP19.39■□□□□ 0.7
ABCD4-225ENST00000556517 DIP2BQ9P265 1576 aa19.39■□□□□ 0.69
ABCD4-225ENST00000556517 FAM69CQ0P6D2 419 aa19.37■□□□□ 0.69
ABCD4-225ENST00000556517 TRHP20396 242 aaPredicted RBP19.36■□□□□ 0.69
ABCD4-225ENST00000556517 GLI2P10070 1586 aa19.36■□□□□ 0.69
ABCD4-225ENST00000556517 NCOA2Q15596 1464 aa19.35■□□□□ 0.69
ABCD4-225ENST00000556517 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
ABCD4-225ENST00000556517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.35■□□□□ 0.69
ABCD4-225ENST00000556517 ABCA9Q8IUA7 1624 aa19.34■□□□□ 0.69
ABCD4-225ENST00000556517 CCNB3Q8WWL7 1395 aa19.33■□□□□ 0.69
ABCD4-225ENST00000556517 TTC37Q6PGP7 1564 aa19.32■□□□□ 0.68
ABCD4-225ENST00000556517 CD109Q6YHK3 1445 aa19.31■□□□□ 0.68
ABCD4-225ENST00000556517 MAP3K4Q9Y6R4 1608 aa19.29■□□□□ 0.68
ABCD4-225ENST00000556517 MYO5CQ9NQX4 1742 aa19.28■□□□□ 0.68
ABCD4-225ENST00000556517 KIF13AQ9H1H9 1805 aa19.28■□□□□ 0.68
ABCD4-225ENST00000556517 ITSN2Q9NZM3 1697 aa19.27■□□□□ 0.68
ABCD4-225ENST00000556517 PLCH2O75038 1416 aa19.25■□□□□ 0.67
ABCD4-225ENST00000556517 MYOM3Q5VTT5 1437 aa19.25■□□□□ 0.67
ABCD4-225ENST00000556517 ARHGAP5Q13017 1502 aa19.25■□□□□ 0.67
ABCD4-225ENST00000556517 PREX2Q70Z35 1606 aa19.25■□□□□ 0.67
ABCD4-225ENST00000556517 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
ABCD4-225ENST00000556517 TEX14Q8IWB6 1497 aa19.24■□□□□ 0.67
ABCD4-225ENST00000556517 CFDP1Q9UEE9 299 aaPredicted RBP19.24■□□□□ 0.67
ABCD4-225ENST00000556517 ARAP3Q8WWN8 1544 aa19.24■□□□□ 0.67
ABCD4-225ENST00000556517 PHLDB1Q86UU1 1377 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms