RNA–Protein interactions for RNA: ENST00000556230.1

RPS29-205, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best)

Gene RPS29, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-205ENST00000556230 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
RPS29-205ENST00000556230 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
RPS29-205ENST00000556230 SHROOM2Q13796 1616 aa13.21□□□□□ -0.3
RPS29-205ENST00000556230 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
RPS29-205ENST00000556230 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
RPS29-205ENST00000556230 KIAA0586Q9BVV6 1533 aa13.12□□□□□ -0.31
RPS29-205ENST00000556230 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
RPS29-205ENST00000556230 RAPGEF2Q9Y4G8 1499 aa13.11□□□□□ -0.31
RPS29-205ENST00000556230 CYB5RLQ6IPT4 315 aa13.1□□□□□ -0.31
RPS29-205ENST00000556230 CTTNBP2Q8WZ74 1663 aa13.09□□□□□ -0.31
RPS29-205ENST00000556230 IQGAP2Q13576 1575 aa13.09□□□□□ -0.31
RPS29-205ENST00000556230 EEA1Q15075 1411 aa13.08□□□□□ -0.32
RPS29-205ENST00000556230 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
RPS29-205ENST00000556230 JPH4Q96JJ6 628 aa13.05□□□□□ -0.32
RPS29-205ENST00000556230 PRXQ9BXM0 1461 aa13.04□□□□□ -0.32
RPS29-205ENST00000556230 UGGT2Q9NYU1 1516 aa12.99□□□□□ -0.33
RPS29-205ENST00000556230 CARMIL2Q6F5E8 1435 aa12.99□□□□□ -0.33
RPS29-205ENST00000556230 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
RPS29-205ENST00000556230 KIF21BO75037 1637 aa12.98□□□□□ -0.33
RPS29-205ENST00000556230 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
RPS29-205ENST00000556230 KIAA0556O60303 1618 aa12.96□□□□□ -0.33
RPS29-205ENST00000556230 DISP1Q96F81 1524 aa12.94□□□□□ -0.34
RPS29-205ENST00000556230 ADCY10Q96PN6 1610 aa12.94□□□□□ -0.34
RPS29-205ENST00000556230 GOLGA3Q08378 1498 aa12.93□□□□□ -0.34
RPS29-205ENST00000556230 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
RPS29-205ENST00000556230 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
RPS29-205ENST00000556230 PTPRGP23470 1445 aa12.91□□□□□ -0.34
RPS29-205ENST00000556230 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
RPS29-205ENST00000556230 MAPKBP1O60336 1514 aa12.87□□□□□ -0.35
RPS29-205ENST00000556230 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
RPS29-205ENST00000556230 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
RPS29-205ENST00000556230 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
RPS29-205ENST00000556230 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
RPS29-205ENST00000556230 TTBK1Q5TCY1 1321 aaPredicted RBP12.85□□□□□ -0.35
RPS29-205ENST00000556230 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPS29-205ENST00000556230 UACAQ9BZF9 1416 aa12.83□□□□□ -0.36
RPS29-205ENST00000556230 EFCAB5A4FU69 1503 aa12.82□□□□□ -0.36
RPS29-205ENST00000556230 ZCCHC11Q5TAX3 1644 aaKnown RBP12.8□□□□□ -0.36
RPS29-205ENST00000556230 ABCA8O94911 1581 aa12.8□□□□□ -0.36
RPS29-205ENST00000556230 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
RPS29-205ENST00000556230 KDM5BQ9UGL1 1544 aa12.78□□□□□ -0.36
RPS29-205ENST00000556230 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
RPS29-205ENST00000556230 ABCC10Q5T3U5 1492 aa12.77□□□□□ -0.37
RPS29-205ENST00000556230 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
RPS29-205ENST00000556230 RAPGEF6Q8TEU7 1601 aa12.76□□□□□ -0.37
RPS29-205ENST00000556230 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
RPS29-205ENST00000556230 FHOD3Q2V2M9 1422 aa12.73□□□□□ -0.37
RPS29-205ENST00000556230 ASXL2Q76L83 1435 aa12.73□□□□□ -0.37
RPS29-205ENST00000556230 RANGAP1P46060 587 aaPredicted RBP12.73□□□□□ -0.37
RPS29-205ENST00000556230 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
RPS29-205ENST00000556230 TSPOAP1O95153 1857 aa12.71□□□□□ -0.37
RPS29-205ENST00000556230 GLI2P10070 1586 aa12.7□□□□□ -0.38
RPS29-205ENST00000556230 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
RPS29-205ENST00000556230 WDR7Q9Y4E6 1490 aa12.69□□□□□ -0.38
RPS29-205ENST00000556230 ARHGAP35Q9NRY4 1499 aa12.68□□□□□ -0.38
RPS29-205ENST00000556230 MAP3K4Q9Y6R4 1608 aa12.67□□□□□ -0.38
RPS29-205ENST00000556230 EPRSP07814 1512 aaKnown RBP12.67□□□□□ -0.38
RPS29-205ENST00000556230 NUP153P49790 1475 aaKnown RBP12.66□□□□□ -0.38
RPS29-205ENST00000556230 FMN1Q68DA7 1419 aa12.66□□□□□ -0.38
RPS29-205ENST00000556230 HECW1Q76N89 1606 aa12.66□□□□□ -0.38
RPS29-205ENST00000556230 CFAP43Q8NDM7 1665 aa12.65□□□□□ -0.38
RPS29-205ENST00000556230 ATP10BO94823 1461 aa12.65□□□□□ -0.38
RPS29-205ENST00000556230 PPRC1Q5VV67 1664 aaKnown RBP12.64□□□□□ -0.39
RPS29-205ENST00000556230 ARID3CA6NKF2 412 aa12.61□□□□□ -0.39
RPS29-205ENST00000556230 KDM6BO15054 1643 aa12.61□□□□□ -0.39
RPS29-205ENST00000556230 CLIP1P30622 1438 aa12.61□□□□□ -0.39
RPS29-205ENST00000556230 TEX14Q8IWB6 1497 aa12.59□□□□□ -0.39
RPS29-205ENST00000556230 PCF11O94913 1555 aaKnown RBP12.59□□□□□ -0.39
RPS29-205ENST00000556230 ABCA9Q8IUA7 1624 aa12.59□□□□□ -0.39
RPS29-205ENST00000556230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
RPS29-205ENST00000556230 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
RPS29-205ENST00000556230 LRRIQ1Q96JM4 1722 aa12.58□□□□□ -0.4
RPS29-205ENST00000556230 CDK13Q14004 1512 aaKnown RBP12.57□□□□□ -0.4
RPS29-205ENST00000556230 FYCO1Q9BQS8 1478 aa12.55□□□□□ -0.4
RPS29-205ENST00000556230 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
RPS29-205ENST00000556230 MAGI3Q5TCQ9 1506 aa12.55□□□□□ -0.4
RPS29-205ENST00000556230 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
RPS29-205ENST00000556230 CD109Q6YHK3 1445 aa12.54□□□□□ -0.4
RPS29-205ENST00000556230 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
RPS29-205ENST00000556230 CCDC18Q5T9S5 1454 aa12.53□□□□□ -0.4
RPS29-205ENST00000556230 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.41
RPS29-205ENST00000556230 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.41
RPS29-205ENST00000556230 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
RPS29-205ENST00000556230 TTC37Q6PGP7 1564 aa12.51□□□□□ -0.41
RPS29-205ENST00000556230 CFAP74Q9C0B2 1584 aa12.51□□□□□ -0.41
RPS29-205ENST00000556230 KIF14Q15058 1648 aa12.51□□□□□ -0.41
RPS29-205ENST00000556230 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
RPS29-205ENST00000556230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.49□□□□□ -0.416e-28■■□□□ 11.8
RPS29-205ENST00000556230 CDK11AQ9UQ88 783 aaPredicted RBP12.49□□□□□ -0.41
RPS29-205ENST00000556230 NEO1Q92859 1461 aa12.46□□□□□ -0.41
RPS29-205ENST00000556230 TROQ12816 1431 aaPredicted RBP12.46□□□□□ -0.41
RPS29-205ENST00000556230 PHLDB1Q86UU1 1377 aa12.44□□□□□ -0.42
RPS29-205ENST00000556230 ARAP3Q8WWN8 1544 aa12.44□□□□□ -0.42
RPS29-205ENST00000556230 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
RPS29-205ENST00000556230 COL17A1Q9UMD9 1497 aaPredicted RBP12.44□□□□□ -0.42
RPS29-205ENST00000556230 FANCAO15360 1455 aa12.42□□□□□ -0.42
RPS29-205ENST00000556230 PREX2Q70Z35 1606 aa12.41□□□□□ -0.42
RPS29-205ENST00000556230 VPS8Q8N3P4 1428 aa12.4□□□□□ -0.42
RPS29-205ENST00000556230 ADRA2BP18089 450 aa12.4□□□□□ -0.42
RPS29-205ENST00000556230 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms