RNA–Protein interactions for RNA: ENST00000555728.5

ITGA7-213, Transcript of integrin subunit alpha 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ITGA7, Length 3,930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-213ENST00000555728 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
ITGA7-213ENST00000555728 CUX2O14529 1486 aa16.21■□□□□ 0.19
ITGA7-213ENST00000555728 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.19
ITGA7-213ENST00000555728 NESP48681 1621 aa16.21■□□□□ 0.19
ITGA7-213ENST00000555728 EEA1Q15075 1411 aa16.2■□□□□ 0.18
ITGA7-213ENST00000555728 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
ITGA7-213ENST00000555728 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
ITGA7-213ENST00000555728 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
ITGA7-213ENST00000555728 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
ITGA7-213ENST00000555728 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.18
ITGA7-213ENST00000555728 NPM2Q86SE8 214 aaKnown RBP16.13■□□□□ 0.17
ITGA7-213ENST00000555728 RRP7BPQ9NSQ0 103 aa16.13■□□□□ 0.17
ITGA7-213ENST00000555728 CFTRP13569 1480 aa16.1■□□□□ 0.17
ITGA7-213ENST00000555728 MTUS2Q5JR59 1369 aa16.1■□□□□ 0.17
ITGA7-213ENST00000555728 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
ITGA7-213ENST00000555728 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.17
ITGA7-213ENST00000555728 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
ITGA7-213ENST00000555728 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
ITGA7-213ENST00000555728 SUPT16HQ9Y5B9 1047 aaKnown RBP16.03■□□□□ 0.16
ITGA7-213ENST00000555728 PEG3Q9GZU2 1588 aa16.03■□□□□ 0.16
ITGA7-213ENST00000555728 ANP32AP39687 249 aaKnown RBP16.03■□□□□ 0.16
ITGA7-213ENST00000555728 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.15
ITGA7-213ENST00000555728 TMC1Q8TDI8 760 aa16■□□□□ 0.15
ITGA7-213ENST00000555728 BCL11AQ9H165 835 aa16■□□□□ 0.15
ITGA7-213ENST00000555728 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
ITGA7-213ENST00000555728 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
ITGA7-213ENST00000555728 CCDC136Q96JN2 1154 aa15.99■□□□□ 0.15
ITGA7-213ENST00000555728 FGD5Q6ZNL6 1462 aa15.98■□□□□ 0.15
ITGA7-213ENST00000555728 NBR1Q14596 966 aa15.97■□□□□ 0.15
ITGA7-213ENST00000555728 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
ITGA7-213ENST00000555728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
ITGA7-213ENST00000555728 VPS8Q8N3P4 1428 aa15.93■□□□□ 0.14
ITGA7-213ENST00000555728 CANXP27824 592 aaKnown RBP15.92■□□□□ 0.14
ITGA7-213ENST00000555728 NPM1P06748 294 aaKnown RBP eCLIP15.88■□□□□ 0.13
ITGA7-213ENST00000555728 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
ITGA7-213ENST00000555728 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.13
ITGA7-213ENST00000555728 ANP32EQ9BTT0 268 aa15.86■□□□□ 0.13
ITGA7-213ENST00000555728 RAPGEF2Q9Y4G8 1499 aa15.85■□□□□ 0.13
ITGA7-213ENST00000555728 IGF1RP08069 1367 aa15.84■□□□□ 0.13
ITGA7-213ENST00000555728 TSPY4P0CV99 314 aa15.84■□□□□ 0.13
ITGA7-213ENST00000555728 TSPY10P0CW01 314 aa15.84■□□□□ 0.13
ITGA7-213ENST00000555728 CUX1P39880 1505 aa15.84■□□□□ 0.13
ITGA7-213ENST00000555728 KCNH8Q96L42 1107 aa15.84■□□□□ 0.13
ITGA7-213ENST00000555728 TOPBP1Q92547 1522 aa15.83■□□□□ 0.13
ITGA7-213ENST00000555728 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
ITGA7-213ENST00000555728 RGL3Q3MIN7 710 aa15.82■□□□□ 0.12
ITGA7-213ENST00000555728 ZBTB47Q9UFB7 747 aaPredicted RBP15.82■□□□□ 0.12
ITGA7-213ENST00000555728 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
ITGA7-213ENST00000555728 MRC2Q9UBG0 1479 aa15.81■□□□□ 0.12
ITGA7-213ENST00000555728 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
ITGA7-213ENST00000555728 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
ITGA7-213ENST00000555728 B4GALNT3Q6L9W6 998 aa15.78■□□□□ 0.12
ITGA7-213ENST00000555728 RAB3GAP2Q9H2M9 1393 aa15.77■□□□□ 0.12
ITGA7-213ENST00000555728 FOXD1Q16676 465 aa15.75■□□□□ 0.11
ITGA7-213ENST00000555728 JPH4Q96JJ6 628 aa15.75■□□□□ 0.11
ITGA7-213ENST00000555728 PLEKHD1A6NEE1 506 aa15.74■□□□□ 0.11
ITGA7-213ENST00000555728 SETD5Q9C0A6 1442 aa15.73■□□□□ 0.11
ITGA7-213ENST00000555728 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
ITGA7-213ENST00000555728 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
ITGA7-213ENST00000555728 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.11
ITGA7-213ENST00000555728 RBM19Q9Y4C8 960 aaKnown RBP15.71■□□□□ 0.11
ITGA7-213ENST00000555728 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
ITGA7-213ENST00000555728 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
ITGA7-213ENST00000555728 WDR43Q15061 677 aaKnown RBP eCLIP15.69■□□□□ 0.1
ITGA7-213ENST00000555728 CARD11Q9BXL7 1154 aa15.69■□□□□ 0.1
ITGA7-213ENST00000555728 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
ITGA7-213ENST00000555728 DHX57Q6P158 1386 aaKnown RBP15.68■□□□□ 0.1
ITGA7-213ENST00000555728 HSPA5P11021 654 aaKnown RBP15.68■□□□□ 0.1
ITGA7-213ENST00000555728 PPP1R15AO75807 674 aaPredicted RBP15.68■□□□□ 0.1
ITGA7-213ENST00000555728 PPP4R2Q9NY27 417 aa15.68■□□□□ 0.1
ITGA7-213ENST00000555728 EIF5BO60841 1220 aaKnown RBP15.67■□□□□ 0.1
ITGA7-213ENST00000555728 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
ITGA7-213ENST00000555728 FHOD3Q2V2M9 1422 aa15.66■□□□□ 0.1
ITGA7-213ENST00000555728 ARXQ96QS3 562 aa15.66■□□□□ 0.1
ITGA7-213ENST00000555728 CCER2I3L3R5 266 aa15.65■□□□□ 0.1
ITGA7-213ENST00000555728 TIMELESSQ9UNS1 1208 aa15.65■□□□□ 0.1
ITGA7-213ENST00000555728 SLC24A1O60721 1099 aa15.65■□□□□ 0.1
ITGA7-213ENST00000555728 IFT140Q96RY7 1462 aa15.64■□□□□ 0.09
ITGA7-213ENST00000555728 CARMIL2Q6F5E8 1435 aa15.64■□□□□ 0.09
ITGA7-213ENST00000555728 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
ITGA7-213ENST00000555728 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
ITGA7-213ENST00000555728 NEFMP07197 916 aa15.62■□□□□ 0.09
ITGA7-213ENST00000555728 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.58■□□□□ 0.09
ITGA7-213ENST00000555728 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
ITGA7-213ENST00000555728 DCAF11Q8TEB1 546 aa15.56■□□□□ 0.08
ITGA7-213ENST00000555728 LAS1LQ9Y4W2 734 aaKnown RBP15.56■□□□□ 0.08
ITGA7-213ENST00000555728 CC2D1BQ5T0F9 858 aaKnown RBP15.56■□□□□ 0.08
ITGA7-213ENST00000555728 ABCA10Q8WWZ4 1543 aa15.55■□□□□ 0.08
ITGA7-213ENST00000555728 ARHGAP35Q9NRY4 1499 aa15.55■□□□□ 0.08
ITGA7-213ENST00000555728 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
ITGA7-213ENST00000555728 L3MBTL2Q969R5 705 aa15.54■□□□□ 0.08
ITGA7-213ENST00000555728 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
ITGA7-213ENST00000555728 FMN1Q68DA7 1419 aa15.54■□□□□ 0.08
ITGA7-213ENST00000555728 CYB5RLQ6IPT4 315 aa15.54■□□□□ 0.08
ITGA7-213ENST00000555728 MPHOSPH9Q99550 1183 aa15.53■□□□□ 0.08
ITGA7-213ENST00000555728 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
ITGA7-213ENST00000555728 HSP90AA1P07900 732 aaKnown RBP15.53■□□□□ 0.08
ITGA7-213ENST00000555728 NEUROD2Q15784 382 aa15.53■□□□□ 0.08
ITGA7-213ENST00000555728 RGS3P49796 1198 aa15.5■□□□□ 0.07
ITGA7-213ENST00000555728 PKD2Q13563 968 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms