RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 PPRC1Q5VV67 1664 aaKnown RBP22.93■■□□□ 1.26
ABCD4-222ENST00000555617 COL17A1Q9UMD9 1497 aaPredicted RBP22.89■■□□□ 1.25
ABCD4-222ENST00000555617 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
ABCD4-222ENST00000555617 ADCY10Q96PN6 1610 aa22.87■■□□□ 1.25
ABCD4-222ENST00000555617 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
ABCD4-222ENST00000555617 NUP160Q12769 1436 aa22.83■■□□□ 1.25
ABCD4-222ENST00000555617 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
ABCD4-222ENST00000555617 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
ABCD4-222ENST00000555617 PRG4Q92954 1404 aaPredicted RBP22.73■■□□□ 1.23
ABCD4-222ENST00000555617 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
ABCD4-222ENST00000555617 NPM1P06748 294 aaKnown RBP eCLIP22.69■■□□□ 1.22
ABCD4-222ENST00000555617 CERKQ8TCT0 537 aa22.66■■□□□ 1.22
ABCD4-222ENST00000555617 ADAMTS12P58397 1594 aa22.65■■□□□ 1.22
ABCD4-222ENST00000555617 CUX1P39880 1505 aa22.63■■□□□ 1.21
ABCD4-222ENST00000555617 PCF11O94913 1555 aaKnown RBP22.57■■□□□ 1.2
ABCD4-222ENST00000555617 KIF21BO75037 1637 aa22.53■■□□□ 1.2
ABCD4-222ENST00000555617 GLI2P10070 1586 aa22.53■■□□□ 1.2
ABCD4-222ENST00000555617 PTPRMP28827 1452 aa22.49■■□□□ 1.19
ABCD4-222ENST00000555617 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
ABCD4-222ENST00000555617 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
ABCD4-222ENST00000555617 MAP3K4Q9Y6R4 1608 aa22.44■■□□□ 1.18
ABCD4-222ENST00000555617 ADAMTSL3P82987 1691 aa22.42■■□□□ 1.18
ABCD4-222ENST00000555617 RUSC2Q8N2Y8 1516 aa22.39■■□□□ 1.17
ABCD4-222ENST00000555617 ASXL2Q76L83 1435 aa22.38■■□□□ 1.17
ABCD4-222ENST00000555617 HSPA2P54652 639 aa22.37■■□□□ 1.17
ABCD4-222ENST00000555617 FHAD1B1AJZ9 1412 aa22.35■■□□□ 1.17
ABCD4-222ENST00000555617 CUL7Q14999 1698 aa22.3■■□□□ 1.16
ABCD4-222ENST00000555617 PLB1Q6P1J6 1458 aa22.28■■□□□ 1.16
ABCD4-222ENST00000555617 TEX14Q8IWB6 1497 aa22.28■■□□□ 1.16
ABCD4-222ENST00000555617 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
ABCD4-222ENST00000555617 ABCC2Q92887 1545 aa22.25■■□□□ 1.15
ABCD4-222ENST00000555617 MADDQ8WXG6 1647 aa22.24■■□□□ 1.15
ABCD4-222ENST00000555617 BCORL1Q5H9F3 1711 aa22.14■■□□□ 1.14
ABCD4-222ENST00000555617 KIAA0586Q9BVV6 1533 aa22.12■■□□□ 1.13
ABCD4-222ENST00000555617 RIMS1Q86UR5 1692 aaKnown RBP22.11■■□□□ 1.13
ABCD4-222ENST00000555617 ERICH3Q5RHP9 1530 aa22.1■■□□□ 1.13
ABCD4-222ENST00000555617 TTBK1Q5TCY1 1321 aaPredicted RBP22.06■■□□□ 1.12
ABCD4-222ENST00000555617 PTPRGP23470 1445 aa22.06■■□□□ 1.12
ABCD4-222ENST00000555617 STRCQ7RTU9 1775 aa22.01■■□□□ 1.11
ABCD4-222ENST00000555617 MED1Q15648 1581 aaPredicted RBP22■■□□□ 1.11
ABCD4-222ENST00000555617 ZCCHC11Q5TAX3 1644 aaKnown RBP21.97■■□□□ 1.11
ABCD4-222ENST00000555617 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
ABCD4-222ENST00000555617 MAGI3Q5TCQ9 1506 aa21.95■■□□□ 1.1
ABCD4-222ENST00000555617 KDM5BQ9UGL1 1544 aa21.93■■□□□ 1.1
ABCD4-222ENST00000555617 PLPPR3Q6T4P5 718 aa21.92■■□□□ 1.1
ABCD4-222ENST00000555617 LTBP4Q8N2S1 1624 aa21.91■■□□□ 1.1
ABCD4-222ENST00000555617 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
ABCD4-222ENST00000555617 CFAP43Q8NDM7 1665 aa21.88■■□□□ 1.09
ABCD4-222ENST00000555617 CD109Q6YHK3 1445 aa21.86■■□□□ 1.09
ABCD4-222ENST00000555617 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
ABCD4-222ENST00000555617 UACAQ9BZF9 1416 aa21.84■■□□□ 1.09
ABCD4-222ENST00000555617 ARAP3Q8WWN8 1544 aa21.84■■□□□ 1.09
ABCD4-222ENST00000555617 WDR7Q9Y4E6 1490 aa21.83■■□□□ 1.08
ABCD4-222ENST00000555617 YEATS2Q9ULM3 1422 aa21.8■■□□□ 1.08
ABCD4-222ENST00000555617 IQSEC2Q5JU85 1478 aa21.78■■□□□ 1.08
ABCD4-222ENST00000555617 SIGLEC1Q9BZZ2 1709 aa21.77■■□□□ 1.08
ABCD4-222ENST00000555617 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.07
ABCD4-222ENST00000555617 FRMPD1Q5SYB0 1578 aa21.75■■□□□ 1.07
ABCD4-222ENST00000555617 PREX1Q8TCU6 1659 aa21.75■■□□□ 1.07
ABCD4-222ENST00000555617 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
ABCD4-222ENST00000555617 RAPGEF3O95398 923 aa21.7■■□□□ 1.06
ABCD4-222ENST00000555617 TTC37Q6PGP7 1564 aa21.65■■□□□ 1.06
ABCD4-222ENST00000555617 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.05
ABCD4-222ENST00000555617 ARHGEF40Q8TER5 1519 aa21.64■■□□□ 1.05
ABCD4-222ENST00000555617 FER1L4A9Z1Z3 1794 aa21.64■■□□□ 1.05
ABCD4-222ENST00000555617 PTPRTO14522 1441 aa21.63■■□□□ 1.05
ABCD4-222ENST00000555617 CARMIL2Q6F5E8 1435 aa21.63■■□□□ 1.05
ABCD4-222ENST00000555617 DISP1Q96F81 1524 aa21.63■■□□□ 1.05
ABCD4-222ENST00000555617 UBAP1LF5GYI3 381 aa21.62■■□□□ 1.05
ABCD4-222ENST00000555617 KCNH8Q96L42 1107 aa21.62■■□□□ 1.05
ABCD4-222ENST00000555617 HSPA1LP34931 641 aa21.6■■□□□ 1.05
ABCD4-222ENST00000555617 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
ABCD4-222ENST00000555617 IQGAP2Q13576 1575 aa21.5■■□□□ 1.03
ABCD4-222ENST00000555617 CEBPAP49715 358 aaPredicted RBP21.48■■□□□ 1.03
ABCD4-222ENST00000555617 RGS17Q9UGC6 210 aaPredicted RBP21.46■■□□□ 1.03
ABCD4-222ENST00000555617 RICTORQ6R327 1708 aa21.43■■□□□ 1.02
ABCD4-222ENST00000555617 MLECQ14165 292 aa21.43■■□□□ 1.02
ABCD4-222ENST00000555617 FANCAO15360 1455 aa21.43■■□□□ 1.02
ABCD4-222ENST00000555617 SRCAPQ6ZRS2 3230 aa21.42■■□□□ 1.02
ABCD4-222ENST00000555617 ZNF335Q9H4Z2 1342 aaPredicted RBP21.42■■□□□ 1.02
ABCD4-222ENST00000555617 UHRF1BP1Q6BDS2 1440 aa21.4■■□□□ 1.02
ABCD4-222ENST00000555617 IGF1RP08069 1367 aa21.4■■□□□ 1.02
ABCD4-222ENST00000555617 SETD1AO15047 1707 aaKnown RBP21.4■■□□□ 1.02
ABCD4-222ENST00000555617 ABCA9Q8IUA7 1624 aa21.4■■□□□ 1.02
ABCD4-222ENST00000555617 POGZQ7Z3K3 1410 aa21.39■■□□□ 1.02
ABCD4-222ENST00000555617 KIAA0556O60303 1618 aa21.39■■□□□ 1.01
ABCD4-222ENST00000555617 ARHGEF12Q9NZN5 1544 aa21.39■■□□□ 1.01
ABCD4-222ENST00000555617 PHLDB1Q86UU1 1377 aa21.37■■□□□ 1.01
ABCD4-222ENST00000555617 NEO1Q92859 1461 aa21.36■■□□□ 1.01
ABCD4-222ENST00000555617 SETD1BQ9UPS6 1966 aaKnown RBP21.35■■□□□ 1.01
ABCD4-222ENST00000555617 NCOA1Q15788 1441 aa21.35■■□□□ 1.01
ABCD4-222ENST00000555617 SCAF1Q9H7N4 1312 aaKnown RBP21.34■■□□□ 1.01
ABCD4-222ENST00000555617 PIP4K2BP78356 416 aa21.33■■□□□ 1.01
ABCD4-222ENST00000555617 ABCA8O94911 1581 aa21.31■■□□□ 1
ABCD4-222ENST00000555617 AKNAQ7Z591 1439 aa21.29■■□□□ 1
ABCD4-222ENST00000555617 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
ABCD4-222ENST00000555617 ZFYVE16Q7Z3T8 1539 aa21.27■■□□□ 1
ABCD4-222ENST00000555617 ALKQ9UM73 1620 aa21.26■□□□□ 0.99
ABCD4-222ENST00000555617 ZMYM4Q5VZL5 1548 aa21.25■□□□□ 0.99
ABCD4-222ENST00000555617 FHOD3Q2V2M9 1422 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms