RNA–Protein interactions for RNA: ENST00000555188.5

SHE-203, Transcript of Src homology 2 domain containing E, humanhuman

TSL 1 (best)

Gene SHE, Length 6,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-203ENST00000555188 NAP1L5Q96NT1 182 aaPredicted RBP11.61□□□□□ -0.55
SHE-203ENST00000555188 TSHZ2Q9NRE2 1034 aa11.6□□□□□ -0.55
SHE-203ENST00000555188 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
SHE-203ENST00000555188 LAS1LQ9Y4W2 734 aaKnown RBP11.6□□□□□ -0.55
SHE-203ENST00000555188 TRIM44Q96DX7 344 aaPredicted RBP11.6□□□□□ -0.55
SHE-203ENST00000555188 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
SHE-203ENST00000555188 TNNT2P45379 298 aaPredicted RBP11.57□□□□□ -0.56
SHE-203ENST00000555188 ARID4BQ4LE39 1312 aaPredicted RBP11.56□□□□□ -0.56
SHE-203ENST00000555188 PPP4R2Q9NY27 417 aa11.56□□□□□ -0.56
SHE-203ENST00000555188 HIRIP3Q9BW71 556 aaPredicted RBP11.55□□□□□ -0.56
SHE-203ENST00000555188 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
SHE-203ENST00000555188 TMC1Q8TDI8 760 aa11.55□□□□□ -0.56
SHE-203ENST00000555188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.56
SHE-203ENST00000555188 BECN1Q14457 450 aa11.53□□□□□ -0.56
SHE-203ENST00000555188 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.52□□□□□ -0.56
SHE-203ENST00000555188 HAP1P54257 671 aaPredicted RBP11.51□□□□□ -0.57
SHE-203ENST00000555188 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
SHE-203ENST00000555188 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
SHE-203ENST00000555188 B4GALNT3Q6L9W6 998 aa11.47□□□□□ -0.57
SHE-203ENST00000555188 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
SHE-203ENST00000555188 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
SHE-203ENST00000555188 KCNH8Q96L42 1107 aa11.42□□□□□ -0.58
SHE-203ENST00000555188 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
SHE-203ENST00000555188 CDK11BP21127 795 aaKnown RBP11.4□□□□□ -0.58
SHE-203ENST00000555188 EIF4G2P78344 907 aaKnown RBP eCLIP11.4□□□□□ -0.59
SHE-203ENST00000555188 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
SHE-203ENST00000555188 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
SHE-203ENST00000555188 L1TD1Q5T7N2 865 aaKnown RBP11.38□□□□□ -0.59
SHE-203ENST00000555188 AEBP2Q6ZN18 517 aaPredicted RBP11.38□□□□□ -0.59
SHE-203ENST00000555188 PTMAP06454 111 aaKnown RBP11.37□□□□□ -0.59
SHE-203ENST00000555188 WDR43Q15061 677 aaKnown RBP eCLIP11.37□□□□□ -0.59
SHE-203ENST00000555188 MLECQ14165 292 aa11.36□□□□□ -0.59
SHE-203ENST00000555188 NCLP19338 710 aaKnown RBP11.36□□□□□ -0.59
SHE-203ENST00000555188 CEP162Q5TB80 1403 aa11.34□□□□□ -0.59
SHE-203ENST00000555188 NPHP1O15259 732 aa11.34□□□□□ -0.59
SHE-203ENST00000555188 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
SHE-203ENST00000555188 PNNQ9H307 717 aaKnown RBP11.33□□□□□ -0.6
SHE-203ENST00000555188 CCER2I3L3R5 266 aa11.32□□□□□ -0.6
SHE-203ENST00000555188 CLIP1P30622 1438 aa11.32□□□□□ -0.6
SHE-203ENST00000555188 RGS3P49796 1198 aa11.31□□□□□ -0.6
SHE-203ENST00000555188 IPO9Q96P70 1041 aaKnown RBP11.31□□□□□ -0.6
SHE-203ENST00000555188 CHIC2Q9UKJ5 165 aa11.3□□□□□ -0.6
SHE-203ENST00000555188 RSPH6AQ9H0K4 717 aa11.29□□□□□ -0.6
SHE-203ENST00000555188 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
SHE-203ENST00000555188 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
SHE-203ENST00000555188 MSNP26038 577 aaKnown RBP11.28□□□□□ -0.6
SHE-203ENST00000555188 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
SHE-203ENST00000555188 PPP1R15AO75807 674 aaPredicted RBP11.26□□□□□ -0.61
SHE-203ENST00000555188 HSP90AA2PQ14568 343 aaPredicted RBP11.26□□□□□ -0.61
SHE-203ENST00000555188 TPRNQ4KMQ1 711 aa11.26□□□□□ -0.61
SHE-203ENST00000555188 SOX12O15370 315 aa11.24□□□□□ -0.61
SHE-203ENST00000555188 FANCIQ9NVI1 1328 aa11.24□□□□□ -0.61
SHE-203ENST00000555188 SIN3AQ96ST3 1273 aa11.24□□□□□ -0.61
SHE-203ENST00000555188 MYH16Q9H6N6 1097 aa11.23□□□□□ -0.61
SHE-203ENST00000555188 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
SHE-203ENST00000555188 PHF23Q9BUL5 403 aaPredicted RBP11.22□□□□□ -0.61
SHE-203ENST00000555188 ZCCHC6Q5VYS8 1495 aaKnown RBP11.22□□□□□ -0.61
SHE-203ENST00000555188 ARID3AQ99856 593 aa11.21□□□□□ -0.61
SHE-203ENST00000555188 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
SHE-203ENST00000555188 GOLGA3Q08378 1498 aa11.2□□□□□ -0.62
SHE-203ENST00000555188 CHMP7Q8WUX9 453 aaPredicted RBP11.2□□□□□ -0.62
SHE-203ENST00000555188 HSP90AB1P08238 724 aaKnown RBP11.2□□□□□ -0.62
SHE-203ENST00000555188 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
SHE-203ENST00000555188 TNIKQ9UKE5 1360 aa11.19□□□□□ -0.62
SHE-203ENST00000555188 PLCB2Q00722 1185 aa11.19□□□□□ -0.62
SHE-203ENST00000555188 GZF1Q9H116 711 aaPredicted RBP11.18□□□□□ -0.62
SHE-203ENST00000555188 CHAF1AQ13111 956 aaPredicted RBP11.18□□□□□ -0.62
SHE-203ENST00000555188 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
SHE-203ENST00000555188 GOLGA6L3A6NEY3 463 aa11.18□□□□□ -0.62
SHE-203ENST00000555188 CCDC9Q9Y3X0 531 aaKnown RBP11.17□□□□□ -0.62
SHE-203ENST00000555188 GSE1Q14687 1217 aa11.17□□□□□ -0.62
SHE-203ENST00000555188 HSCBQ8IWL3 235 aa11.17□□□□□ -0.62
SHE-203ENST00000555188 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
SHE-203ENST00000555188 EEA1Q15075 1411 aa11.16□□□□□ -0.62
SHE-203ENST00000555188 SLKQ9H2G2 1235 aaPredicted RBP11.16□□□□□ -0.62
SHE-203ENST00000555188 RRP7BPQ9NSQ0 103 aa11.15□□□□□ -0.62
SHE-203ENST00000555188 MTUS2Q5JR59 1369 aa11.14□□□□□ -0.63
SHE-203ENST00000555188 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
SHE-203ENST00000555188 PKNOX2Q96KN3 472 aa11.12□□□□□ -0.63
SHE-203ENST00000555188 CASC1Q6TDU7 716 aa11.11□□□□□ -0.63
SHE-203ENST00000555188 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
SHE-203ENST00000555188 FRAT1Q92837 279 aaPredicted RBP11.11□□□□□ -0.63
SHE-203ENST00000555188 GBP4Q96PP9 640 aa11.09□□□□□ -0.63
SHE-203ENST00000555188 ZRSR1Q15695 479 aaKnown RBP11.09□□□□□ -0.63
SHE-203ENST00000555188 RGL3Q3MIN7 710 aa11.08□□□□□ -0.64
SHE-203ENST00000555188 RCAN3Q9UKA8 241 aa11.08□□□□□ -0.64
SHE-203ENST00000555188 PTMSP20962 102 aa11.08□□□□□ -0.64
SHE-203ENST00000555188 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
SHE-203ENST00000555188 KNSTRNQ9Y448 316 aa11.07□□□□□ -0.64
SHE-203ENST00000555188 TNNT3P45378 269 aaPredicted RBP11.07□□□□□ -0.64
SHE-203ENST00000555188 KIAA2012Q0VF49 1180 aa11.07□□□□□ -0.64
SHE-203ENST00000555188 NUDCQ9Y266 331 aa11.07□□□□□ -0.64
SHE-203ENST00000555188 CCNB3Q8WWL7 1395 aa11.06□□□□□ -0.64
SHE-203ENST00000555188 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
SHE-203ENST00000555188 GOLGA6L6A8MZA4 724 aa11.05□□□□□ -0.64
SHE-203ENST00000555188 HSPA5P11021 654 aaKnown RBP11.05□□□□□ -0.64
SHE-203ENST00000555188 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
SHE-203ENST00000555188 ISY1Q9ULR0 285 aaKnown RBP11.05□□□□□ -0.64
SHE-203ENST00000555188 ZNF330Q9Y3S2 320 aaPredicted RBP11.05□□□□□ -0.64
SHE-203ENST00000555188 PDE4AP27815 886 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms