RNA–Protein interactions for RNA: ENST00000555188.5

SHE-203, Transcript of Src homology 2 domain containing E, humanhuman

TSL 1 (best)

Gene SHE, Length 6,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-203ENST00000555188 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
SHE-203ENST00000555188 EHMT2Q96KQ7 1210 aa14.17□□□□□ -0.14
SHE-203ENST00000555188 PELP1Q8IZL8 1130 aaKnown RBP14.05□□□□□ -0.16
SHE-203ENST00000555188 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
SHE-203ENST00000555188 MYT1Q01538 1121 aa13.89□□□□□ -0.19
SHE-203ENST00000555188 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
SHE-203ENST00000555188 CENPBP07199 599 aaPredicted RBP13.6□□□□□ -0.23
SHE-203ENST00000555188 SHROOM4Q9ULL8 1493 aa13.54□□□□□ -0.24
SHE-203ENST00000555188 TTBK1Q5TCY1 1321 aaPredicted RBP13.49□□□□□ -0.25
SHE-203ENST00000555188 ZEB1P37275 1124 aaPredicted RBP13.47□□□□□ -0.25
SHE-203ENST00000555188 RANGAP1P46060 587 aaPredicted RBP13.47□□□□□ -0.25
SHE-203ENST00000555188 NISCHQ9Y2I1 1504 aa13.45□□□□□ -0.26
SHE-203ENST00000555188 ERICH6Q7L0X2 663 aa13.42□□□□□ -0.26
SHE-203ENST00000555188 HRCP23327 699 aa13.35□□□□□ -0.27
SHE-203ENST00000555188 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.28
SHE-203ENST00000555188 ATP1B4Q9UN42 357 aaPredicted RBP13.24□□□□□ -0.29
SHE-203ENST00000555188 YTHDC1Q96MU7 727 aaKnown RBP13.2□□□□□ -0.3
SHE-203ENST00000555188 CHIC1Q5VXU3 224 aa13.2□□□□□ -0.3
SHE-203ENST00000555188 FAM9AQ8IZU1 332 aaPredicted RBP13.14□□□□□ -0.31
SHE-203ENST00000555188 APLP2Q06481 763 aa13.12□□□□□ -0.31
SHE-203ENST00000555188 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
SHE-203ENST00000555188 NEFLP07196 543 aa13.05□□□□□ -0.32
SHE-203ENST00000555188 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.32
SHE-203ENST00000555188 MYT1LQ9UL68 1186 aa12.98□□□□□ -0.33
SHE-203ENST00000555188 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
SHE-203ENST00000555188 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
SHE-203ENST00000555188 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
SHE-203ENST00000555188 CNGB1Q14028 1251 aaPredicted RBP12.74□□□□□ -0.37
SHE-203ENST00000555188 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
SHE-203ENST00000555188 LOC105371045A0A1W2PR82 267 aa12.67□□□□□ -0.38
SHE-203ENST00000555188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
SHE-203ENST00000555188 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
SHE-203ENST00000555188 ACIN1Q9UKV3 1341 aaKnown RBP12.64□□□□□ -0.39
SHE-203ENST00000555188 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
SHE-203ENST00000555188 UBTFP17480 764 aaKnown RBP12.61□□□□□ -0.39
SHE-203ENST00000555188 DAXXQ9UER7 740 aaPredicted RBP12.6□□□□□ -0.39
SHE-203ENST00000555188 POLR3GLQ9BT43 218 aa12.59□□□□□ -0.39
SHE-203ENST00000555188 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
SHE-203ENST00000555188 BCANQ96GW7 911 aa12.49□□□□□ -0.41
SHE-203ENST00000555188 SCAF1Q9H7N4 1312 aaKnown RBP12.45□□□□□ -0.42
SHE-203ENST00000555188 ITGAEP38570 1179 aa12.45□□□□□ -0.42
SHE-203ENST00000555188 CDK11AQ9UQ88 783 aaPredicted RBP12.37□□□□□ -0.43
SHE-203ENST00000555188 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
SHE-203ENST00000555188 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
SHE-203ENST00000555188 BCL11AQ9H165 835 aa12.33□□□□□ -0.44
SHE-203ENST00000555188 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
SHE-203ENST00000555188 FBLN2P98095 1184 aa12.31□□□□□ -0.44
SHE-203ENST00000555188 EIF5BO60841 1220 aaKnown RBP12.27□□□□□ -0.45
SHE-203ENST00000555188 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
SHE-203ENST00000555188 SENP3Q9H4L4 574 aaPredicted RBP12.22□□□□□ -0.45
SHE-203ENST00000555188 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
SHE-203ENST00000555188 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
SHE-203ENST00000555188 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
SHE-203ENST00000555188 ANP32AP39687 249 aaKnown RBP12.16□□□□□ -0.46
SHE-203ENST00000555188 ANP32CO43423 234 aa12.15□□□□□ -0.46
SHE-203ENST00000555188 FKBP8Q14318 412 aa12.15□□□□□ -0.46
SHE-203ENST00000555188 ANP32EQ9BTT0 268 aa12.14□□□□□ -0.47
SHE-203ENST00000555188 GLIPR1L2Q4G1C9 344 aa12.13□□□□□ -0.47
SHE-203ENST00000555188 DCAF1Q9Y4B6 1507 aa12.08□□□□□ -0.48
SHE-203ENST00000555188 A0A0G2JS52 829 aa12.08□□□□□ -0.48
SHE-203ENST00000555188 NBR1Q14596 966 aa12.05□□□□□ -0.48
SHE-203ENST00000555188 NPM2Q86SE8 214 aaKnown RBP12.03□□□□□ -0.48
SHE-203ENST00000555188 MIER1Q8N108 512 aa11.97□□□□□ -0.49
SHE-203ENST00000555188 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
SHE-203ENST00000555188 FAM50AQ14320 339 aaKnown RBP11.93□□□□□ -0.5
SHE-203ENST00000555188 ZNF326Q5BKZ1 582 aaKnown RBP11.93□□□□□ -0.5
SHE-203ENST00000555188 HNRNPUQ00839 825 aaKnown RBP eCLIP11.87□□□□□ -0.51
SHE-203ENST00000555188 ABCC9O60706 1549 aa11.86□□□□□ -0.51
SHE-203ENST00000555188 TRIM52Q96A61 297 aa11.85□□□□□ -0.51
SHE-203ENST00000555188 ZBTB7CA1YPR0 619 aa11.84□□□□□ -0.51
SHE-203ENST00000555188 DDX10Q13206 875 aaKnown RBP11.82□□□□□ -0.52
SHE-203ENST00000555188 P3H3Q8IVL6 736 aa11.82□□□□□ -0.52
SHE-203ENST00000555188 ANP32BQ92688 251 aaKnown RBP11.82□□□□□ -0.52
SHE-203ENST00000555188 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
SHE-203ENST00000555188 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
SHE-203ENST00000555188 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
SHE-203ENST00000555188 SUPT16HQ9Y5B9 1047 aaKnown RBP11.78□□□□□ -0.52
SHE-203ENST00000555188 CHGAP10645 457 aaKnown RBP11.77□□□□□ -0.52
SHE-203ENST00000555188 ESF1Q9H501 851 aaKnown RBP11.77□□□□□ -0.53
SHE-203ENST00000555188 CANXP27824 592 aaKnown RBP11.76□□□□□ -0.53
SHE-203ENST00000555188 ARXQ96QS3 562 aa11.75□□□□□ -0.53
SHE-203ENST00000555188 ZNF777Q9ULD5 760 aaPredicted RBP11.75□□□□□ -0.53
SHE-203ENST00000555188 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
SHE-203ENST00000555188 FAM9BQ8IZU0 186 aa11.74□□□□□ -0.53
SHE-203ENST00000555188 CCDC180Q9P1Z9 1646 aa11.73□□□□□ -0.53
SHE-203ENST00000555188 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
SHE-203ENST00000555188 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
SHE-203ENST00000555188 DEKP35659 375 aaKnown RBP11.71□□□□□ -0.53
SHE-203ENST00000555188 NEFMP07197 916 aa11.71□□□□□ -0.54
SHE-203ENST00000555188 UPF2Q9HAU5 1272 aaKnown RBP11.69□□□□□ -0.54
SHE-203ENST00000555188 TRHP20396 242 aaPredicted RBP11.69□□□□□ -0.54
SHE-203ENST00000555188 HSP90AA1P07900 732 aaKnown RBP11.67□□□□□ -0.54
SHE-203ENST00000555188 NOP58Q9Y2X3 529 aaKnown RBP11.67□□□□□ -0.54
SHE-203ENST00000555188 ERICH6BQ5W0A0 696 aa11.67□□□□□ -0.54
SHE-203ENST00000555188 RBM19Q9Y4C8 960 aaKnown RBP11.65□□□□□ -0.54
SHE-203ENST00000555188 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
SHE-203ENST00000555188 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
SHE-203ENST00000555188 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
SHE-203ENST00000555188 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
SHE-203ENST00000555188 MRS2Q9HD23 443 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms