RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 BCANQ96GW7 911 aa22.97■■□□□ 1.27
PPP4R3A-205ENST00000554684 KANK4Q5T7N3 995 aaPredicted RBP22.94■■□□□ 1.26
PPP4R3A-205ENST00000554684 CFDP1Q9UEE9 299 aaPredicted RBP22.94■■□□□ 1.26
PPP4R3A-205ENST00000554684 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
PPP4R3A-205ENST00000554684 ESF1Q9H501 851 aaKnown RBP22.91■■□□□ 1.26
PPP4R3A-205ENST00000554684 FGD5Q6ZNL6 1462 aa22.88■■□□□ 1.25
PPP4R3A-205ENST00000554684 AQRO60306 1485 aaKnown RBP eCLIP22.88■■□□□ 1.258e-8■■■■□ 23.2
PPP4R3A-205ENST00000554684 TRHP20396 242 aaPredicted RBP22.88■■□□□ 1.25
PPP4R3A-205ENST00000554684 JPH4Q96JJ6 628 aa22.88■■□□□ 1.25
PPP4R3A-205ENST00000554684 NEFLP07196 543 aa22.86■■□□□ 1.25
PPP4R3A-205ENST00000554684 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
PPP4R3A-205ENST00000554684 UNC13AQ9UPW8 1703 aa22.81■■□□□ 1.24
PPP4R3A-205ENST00000554684 KDM2AQ9Y2K7 1162 aa22.79■■□□□ 1.24
PPP4R3A-205ENST00000554684 FHOD3Q2V2M9 1422 aa22.79■■□□□ 1.24
PPP4R3A-205ENST00000554684 HIRIP3Q9BW71 556 aaPredicted RBP22.78■■□□□ 1.24
PPP4R3A-205ENST00000554684 CFTRP13569 1480 aa22.78■■□□□ 1.24
PPP4R3A-205ENST00000554684 STAG3Q9UJ98 1225 aa22.78■■□□□ 1.24
PPP4R3A-205ENST00000554684 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
PPP4R3A-205ENST00000554684 IGF1RP08069 1367 aa22.77■■□□□ 1.24
PPP4R3A-205ENST00000554684 TONSLQ96HA7 1378 aa22.69■■□□□ 1.22
PPP4R3A-205ENST00000554684 RGL3Q3MIN7 710 aa22.69■■□□□ 1.22
PPP4R3A-205ENST00000554684 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
PPP4R3A-205ENST00000554684 ARID4BQ4LE39 1312 aaPredicted RBP22.68■■□□□ 1.22
PPP4R3A-205ENST00000554684 FHAD1B1AJZ9 1412 aa22.64■■□□□ 1.22
PPP4R3A-205ENST00000554684 MLECQ14165 292 aa22.64■■□□□ 1.21
PPP4R3A-205ENST00000554684 CARMIL2Q6F5E8 1435 aa22.63■■□□□ 1.21
PPP4R3A-205ENST00000554684 ANP32CO43423 234 aa22.63■■□□□ 1.21
PPP4R3A-205ENST00000554684 OSCARQ8IYS5 282 aa22.63■■□□□ 1.21
PPP4R3A-205ENST00000554684 CCNB3Q8WWL7 1395 aa22.63■■□□□ 1.21
PPP4R3A-205ENST00000554684 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
PPP4R3A-205ENST00000554684 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
PPP4R3A-205ENST00000554684 DDX10Q13206 875 aaKnown RBP22.6■■□□□ 1.21
PPP4R3A-205ENST00000554684 GTF3C3Q9Y5Q9 886 aa22.6■■□□□ 1.21
PPP4R3A-205ENST00000554684 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.2
PPP4R3A-205ENST00000554684 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
PPP4R3A-205ENST00000554684 CUX1P39880 1505 aa22.51■■□□□ 1.19
PPP4R3A-205ENST00000554684 FOXD1Q16676 465 aa22.51■■□□□ 1.19
PPP4R3A-205ENST00000554684 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
PPP4R3A-205ENST00000554684 MIER1Q8N108 512 aa22.5■■□□□ 1.19
PPP4R3A-205ENST00000554684 HNRNPMP52272 730 aaKnown RBP eCLIP22.48■■□□□ 1.19
PPP4R3A-205ENST00000554684 ACIN1Q9UKV3 1341 aaKnown RBP22.48■■□□□ 1.19
PPP4R3A-205ENST00000554684 GGT6Q6P531 493 aa22.47■■□□□ 1.19
PPP4R3A-205ENST00000554684 FMN1Q68DA7 1419 aa22.46■■□□□ 1.19
PPP4R3A-205ENST00000554684 PTPRGP23470 1445 aa22.45■■□□□ 1.18
PPP4R3A-205ENST00000554684 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
PPP4R3A-205ENST00000554684 PLEKHG5O94827 1062 aa22.42■■□□□ 1.18
PPP4R3A-205ENST00000554684 EFCAB2Q5VUJ9 269 aa22.34■■□□□ 1.17
PPP4R3A-205ENST00000554684 GRIN2BQ13224 1484 aa22.33■■□□□ 1.16
PPP4R3A-205ENST00000554684 ARHGAP35Q9NRY4 1499 aa22.32■■□□□ 1.16
PPP4R3A-205ENST00000554684 PPP1R15AO75807 674 aaPredicted RBP22.31■■□□□ 1.16
PPP4R3A-205ENST00000554684 ZNF644Q9H582 1327 aaPredicted RBP22.3■■□□□ 1.16
PPP4R3A-205ENST00000554684 RAB3GAP2Q9H2M9 1393 aa22.28■■□□□ 1.16
PPP4R3A-205ENST00000554684 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
PPP4R3A-205ENST00000554684 SETD5Q9C0A6 1442 aa22.27■■□□□ 1.15
PPP4R3A-205ENST00000554684 SENP3-EIF4A1A0A087X0R7 540 aa22.26■■□□□ 1.15
PPP4R3A-205ENST00000554684 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
PPP4R3A-205ENST00000554684 KIF21BO75037 1637 aa22.25■■□□□ 1.15
PPP4R3A-205ENST00000554684 SNAPC4Q5SXM2 1469 aa22.25■■□□□ 1.15
PPP4R3A-205ENST00000554684 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
PPP4R3A-205ENST00000554684 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
PPP4R3A-205ENST00000554684 KIF3BO15066 747 aa22.24■■□□□ 1.15
PPP4R3A-205ENST00000554684 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
PPP4R3A-205ENST00000554684 PKD2Q13563 968 aa22.22■■□□□ 1.15
PPP4R3A-205ENST00000554684 SALL2Q9Y467 1007 aaPredicted RBP22.22■■□□□ 1.15
PPP4R3A-205ENST00000554684 SLC24A1O60721 1099 aa22.22■■□□□ 1.15
PPP4R3A-205ENST00000554684 ERICH6Q7L0X2 663 aa22.22■■□□□ 1.15
PPP4R3A-205ENST00000554684 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
PPP4R3A-205ENST00000554684 PRXQ9BXM0 1461 aa22.21■■□□□ 1.15
PPP4R3A-205ENST00000554684 EIF4G2P78344 907 aaKnown RBP eCLIP22.21■■□□□ 1.15
PPP4R3A-205ENST00000554684 ARAP1Q96P48 1450 aa22.19■■□□□ 1.14
PPP4R3A-205ENST00000554684 LAMC3Q9Y6N6 1575 aa22.19■■□□□ 1.14
PPP4R3A-205ENST00000554684 PRG4Q92954 1404 aaPredicted RBP22.19■■□□□ 1.14
PPP4R3A-205ENST00000554684 FAM69CQ0P6D2 419 aa22.18■■□□□ 1.14
PPP4R3A-205ENST00000554684 DCAF11Q8TEB1 546 aa22.18■■□□□ 1.14
PPP4R3A-205ENST00000554684 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
PPP4R3A-205ENST00000554684 FAM9BQ8IZU0 186 aa22.16■■□□□ 1.14
PPP4R3A-205ENST00000554684 HNRNPUQ00839 825 aaKnown RBP eCLIP22.14■■□□□ 1.14
PPP4R3A-205ENST00000554684 SPAG9O60271 1321 aaKnown RBP22.14■■□□□ 1.13
PPP4R3A-205ENST00000554684 NUP155O75694 1391 aa22.13■■□□□ 1.13
PPP4R3A-205ENST00000554684 NUTM2DQ5VT03 806 aaPredicted RBP22.12■■□□□ 1.13
PPP4R3A-205ENST00000554684 TMC1Q8TDI8 760 aa22.12■■□□□ 1.13
PPP4R3A-205ENST00000554684 C14orf37Q86TY3 774 aa22.12■■□□□ 1.13
PPP4R3A-205ENST00000554684 SAFB2Q14151 953 aaKnown RBP eCLIP22.11■■□□□ 1.13
PPP4R3A-205ENST00000554684 MYT1Q01538 1121 aa22.1■■□□□ 1.13
PPP4R3A-205ENST00000554684 CARD11Q9BXL7 1154 aa22.1■■□□□ 1.13
PPP4R3A-205ENST00000554684 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
PPP4R3A-205ENST00000554684 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
PPP4R3A-205ENST00000554684 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
PPP4R3A-205ENST00000554684 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
PPP4R3A-205ENST00000554684 BCL11AQ9H165 835 aa22.06■■□□□ 1.12
PPP4R3A-205ENST00000554684 DHX57Q6P158 1386 aaKnown RBP22.05■■□□□ 1.12
PPP4R3A-205ENST00000554684 AFAP1Q8N556 730 aa22.05■■□□□ 1.12
PPP4R3A-205ENST00000554684 PHLDB1Q86UU1 1377 aa22.03■■□□□ 1.12
PPP4R3A-205ENST00000554684 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
PPP4R3A-205ENST00000554684 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
PPP4R3A-205ENST00000554684 MRS2Q9HD23 443 aa22.02■■□□□ 1.12
PPP4R3A-205ENST00000554684 ANKRD30AQ9BXX3 1397 aa22■■□□□ 1.11
PPP4R3A-205ENST00000554684 STK26Q9P289 416 aa21.99■■□□□ 1.11
PPP4R3A-205ENST00000554684 ZBTB7CA1YPR0 619 aa21.99■■□□□ 1.11
PPP4R3A-205ENST00000554684 WASHC2CQ9Y4E1 1318 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms