RNA–Protein interactions for RNA: ENST00000554683.1

CNIH1-204, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3

Gene CNIH1, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-204ENST00000554683 NUP160Q12769 1436 aa18.16■□□□□ 0.5
CNIH1-204ENST00000554683 RIMBP3CA6NJZ7 1639 aa18.09■□□□□ 0.49
CNIH1-204ENST00000554683 RIMBP3BA6NNM3 1639 aa18.09■□□□□ 0.49
CNIH1-204ENST00000554683 RIMBP3Q9UFD9 1639 aa18.09■□□□□ 0.49
CNIH1-204ENST00000554683 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.49
CNIH1-204ENST00000554683 SHROOM2Q13796 1616 aa18.08■□□□□ 0.48
CNIH1-204ENST00000554683 ARHGEF11O15085 1522 aa18.08■□□□□ 0.48
CNIH1-204ENST00000554683 EEA1Q15075 1411 aa18.06■□□□□ 0.48
CNIH1-204ENST00000554683 PRXQ9BXM0 1461 aa18.03■□□□□ 0.48
CNIH1-204ENST00000554683 RAPGEF2Q9Y4G8 1499 aa18.03■□□□□ 0.48
CNIH1-204ENST00000554683 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
CNIH1-204ENST00000554683 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
CNIH1-204ENST00000554683 KIF21BO75037 1637 aa17.96■□□□□ 0.47
CNIH1-204ENST00000554683 IQGAP2Q13576 1575 aa17.96■□□□□ 0.46
CNIH1-204ENST00000554683 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.46
CNIH1-204ENST00000554683 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
CNIH1-204ENST00000554683 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
CNIH1-204ENST00000554683 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
CNIH1-204ENST00000554683 UGGT2Q9NYU1 1516 aa17.86■□□□□ 0.45
CNIH1-204ENST00000554683 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
CNIH1-204ENST00000554683 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
CNIH1-204ENST00000554683 KIAA0556O60303 1618 aa17.8■□□□□ 0.44
CNIH1-204ENST00000554683 DISP1Q96F81 1524 aa17.8■□□□□ 0.44
CNIH1-204ENST00000554683 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
CNIH1-204ENST00000554683 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
CNIH1-204ENST00000554683 CARMIL2Q6F5E8 1435 aa17.73■□□□□ 0.43
CNIH1-204ENST00000554683 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
CNIH1-204ENST00000554683 ADCY10Q96PN6 1610 aa17.69■□□□□ 0.42
CNIH1-204ENST00000554683 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
CNIH1-204ENST00000554683 TNIKQ9UKE5 1360 aa17.67■□□□□ 0.42
CNIH1-204ENST00000554683 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
CNIH1-204ENST00000554683 EFCAB5A4FU69 1503 aa17.66■□□□□ 0.42
CNIH1-204ENST00000554683 PTPRGP23470 1445 aa17.63■□□□□ 0.41
CNIH1-204ENST00000554683 ABCC2Q92887 1545 aa17.6■□□□□ 0.41
CNIH1-204ENST00000554683 ABCA8O94911 1581 aa17.58■□□□□ 0.41
CNIH1-204ENST00000554683 UHRF1BP1LA0JNW5 1464 aa17.58■□□□□ 0.41
CNIH1-204ENST00000554683 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
CNIH1-204ENST00000554683 UBTFP17480 764 aaKnown RBP17.56■□□□□ 0.4
CNIH1-204ENST00000554683 UACAQ9BZF9 1416 aa17.55■□□□□ 0.4
CNIH1-204ENST00000554683 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
CNIH1-204ENST00000554683 ARHGAP35Q9NRY4 1499 aa17.55■□□□□ 0.4
CNIH1-204ENST00000554683 FHOD3Q2V2M9 1422 aa17.55■□□□□ 0.4
CNIH1-204ENST00000554683 MAPKBP1O60336 1514 aa17.54■□□□□ 0.4
CNIH1-204ENST00000554683 ZCCHC11Q5TAX3 1644 aaKnown RBP17.52■□□□□ 0.4
CNIH1-204ENST00000554683 RAPGEF6Q8TEU7 1601 aa17.52■□□□□ 0.4
CNIH1-204ENST00000554683 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
CNIH1-204ENST00000554683 KDM5BQ9UGL1 1544 aa17.5■□□□□ 0.39
CNIH1-204ENST00000554683 KIF13AQ9H1H9 1805 aa17.47■□□□□ 0.39
CNIH1-204ENST00000554683 RANGAP1P46060 587 aaPredicted RBP17.47■□□□□ 0.39
CNIH1-204ENST00000554683 P3H3Q8IVL6 736 aa17.47■□□□□ 0.39
CNIH1-204ENST00000554683 DIP2BQ9P265 1576 aa17.44■□□□□ 0.38
CNIH1-204ENST00000554683 CLIP1P30622 1438 aa17.43■□□□□ 0.38
CNIH1-204ENST00000554683 NUP153P49790 1475 aaKnown RBP17.43■□□□□ 0.38
CNIH1-204ENST00000554683 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
CNIH1-204ENST00000554683 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
CNIH1-204ENST00000554683 HECW1Q76N89 1606 aa17.4■□□□□ 0.38
CNIH1-204ENST00000554683 CEP162Q5TB80 1403 aa17.4■□□□□ 0.38
CNIH1-204ENST00000554683 MAPK8IP2Q13387 824 aaPredicted RBP17.4■□□□□ 0.38
CNIH1-204ENST00000554683 ASXL2Q76L83 1435 aa17.38■□□□□ 0.37
CNIH1-204ENST00000554683 LRRIQ1Q96JM4 1722 aa17.38■□□□□ 0.37
CNIH1-204ENST00000554683 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
CNIH1-204ENST00000554683 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
CNIH1-204ENST00000554683 ATP10BO94823 1461 aa17.36■□□□□ 0.37
CNIH1-204ENST00000554683 WDR7Q9Y4E6 1490 aa17.36■□□□□ 0.37
CNIH1-204ENST00000554683 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
CNIH1-204ENST00000554683 GLI2P10070 1586 aa17.33■□□□□ 0.37
CNIH1-204ENST00000554683 CDK13Q14004 1512 aaKnown RBP17.32■□□□□ 0.36
CNIH1-204ENST00000554683 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
CNIH1-204ENST00000554683 FYCO1Q9BQS8 1478 aa17.31■□□□□ 0.36
CNIH1-204ENST00000554683 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
CNIH1-204ENST00000554683 MAP3K4Q9Y6R4 1608 aa17.3■□□□□ 0.36
CNIH1-204ENST00000554683 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
CNIH1-204ENST00000554683 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
CNIH1-204ENST00000554683 PPRC1Q5VV67 1664 aaKnown RBP17.28■□□□□ 0.36
CNIH1-204ENST00000554683 ARID3CA6NKF2 412 aa17.27■□□□□ 0.36
CNIH1-204ENST00000554683 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
CNIH1-204ENST00000554683 TSPOAP1O95153 1857 aa17.26■□□□□ 0.35
CNIH1-204ENST00000554683 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
CNIH1-204ENST00000554683 ABCA9Q8IUA7 1624 aa17.24■□□□□ 0.35
CNIH1-204ENST00000554683 FAM69CQ0P6D2 419 aa17.22■□□□□ 0.35
CNIH1-204ENST00000554683 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
CNIH1-204ENST00000554683 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
CNIH1-204ENST00000554683 MAGI3Q5TCQ9 1506 aa17.18■□□□□ 0.34
CNIH1-204ENST00000554683 KCNA4P22459 653 aa17.18■□□□□ 0.34
CNIH1-204ENST00000554683 TTC37Q6PGP7 1564 aa17.18■□□□□ 0.34
CNIH1-204ENST00000554683 KIF14Q15058 1648 aa17.18■□□□□ 0.34
CNIH1-204ENST00000554683 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
CNIH1-204ENST00000554683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
CNIH1-204ENST00000554683 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.33
CNIH1-204ENST00000554683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
CNIH1-204ENST00000554683 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
CNIH1-204ENST00000554683 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
CNIH1-204ENST00000554683 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
CNIH1-204ENST00000554683 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
CNIH1-204ENST00000554683 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
CNIH1-204ENST00000554683 CD109Q6YHK3 1445 aa17.11■□□□□ 0.33
CNIH1-204ENST00000554683 PLEKHD1A6NEE1 506 aa17.1■□□□□ 0.33
CNIH1-204ENST00000554683 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
CNIH1-204ENST00000554683 EHBP1L1Q8N3D4 1523 aa17.1■□□□□ 0.33
CNIH1-204ENST00000554683 KDM6BO15054 1643 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms