RNA–Protein interactions for RNA: ENST00000554569.1

RIPK3-203, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-203ENST00000554569 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
RIPK3-203ENST00000554569 CCNB3Q8WWL7 1395 aa15.25■□□□□ 0.03
RIPK3-203ENST00000554569 RAD54L2Q9Y4B4 1467 aa15.24■□□□□ 0.03
RIPK3-203ENST00000554569 CUL7Q14999 1698 aa15.24■□□□□ 0.03
RIPK3-203ENST00000554569 NESP48681 1621 aa15.23■□□□□ 0.03
RIPK3-203ENST00000554569 EFCAB5A4FU69 1503 aa15.22■□□□□ 0.03
RIPK3-203ENST00000554569 TIAM1Q13009 1591 aa15.22■□□□□ 0.03
RIPK3-203ENST00000554569 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.03
RIPK3-203ENST00000554569 DHX57Q6P158 1386 aaKnown RBP15.21■□□□□ 0.02
RIPK3-203ENST00000554569 URB2Q14146 1524 aaKnown RBP15.19■□□□□ 0.02
RIPK3-203ENST00000554569 LRRC9Q6ZRR7 1453 aa15.19■□□□□ 0.02
RIPK3-203ENST00000554569 CASKIN1Q8WXD9 1431 aa15.16■□□□□ 0.02
RIPK3-203ENST00000554569 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
RIPK3-203ENST00000554569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.13■□□□□ 0.01
RIPK3-203ENST00000554569 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
RIPK3-203ENST00000554569 WDR97A6NE52 1622 aa15.13■□□□□ 0.01
RIPK3-203ENST00000554569 FMN1Q68DA7 1419 aa15.12■□□□□ 0.01
RIPK3-203ENST00000554569 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
RIPK3-203ENST00000554569 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
RIPK3-203ENST00000554569 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
RIPK3-203ENST00000554569 CFAP43Q8NDM7 1665 aa15.1■□□□□ 0.01
RIPK3-203ENST00000554569 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0
RIPK3-203ENST00000554569 FHOD3Q2V2M9 1422 aa15.08■□□□□ 0
RIPK3-203ENST00000554569 SETD5Q9C0A6 1442 aa15.08■□□□□ 0
RIPK3-203ENST00000554569 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
RIPK3-203ENST00000554569 CTTNBP2Q8WZ74 1663 aa15.07■□□□□ 0
RIPK3-203ENST00000554569 PHLDB1Q86UU1 1377 aa15.07■□□□□ 0
RIPK3-203ENST00000554569 P3H3Q8IVL6 736 aa15.06■□□□□ 0
RIPK3-203ENST00000554569 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
RIPK3-203ENST00000554569 RAB3GAP2Q9H2M9 1393 aa15.04■□□□□ -0
RIPK3-203ENST00000554569 SAMD9Q5K651 1589 aa15.03■□□□□ -0
RIPK3-203ENST00000554569 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
RIPK3-203ENST00000554569 TIMELESSQ9UNS1 1208 aa15.01□□□□□ -0.01
RIPK3-203ENST00000554569 SNAPC4Q5SXM2 1469 aa15.01□□□□□ -0.01
RIPK3-203ENST00000554569 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
RIPK3-203ENST00000554569 ATP1B4Q9UN42 357 aaPredicted RBP15□□□□□ -0.01
RIPK3-203ENST00000554569 ITGAEP38570 1179 aa14.99□□□□□ -0.01
RIPK3-203ENST00000554569 FAM50AQ14320 339 aaKnown RBP14.99□□□□□ -0.01
RIPK3-203ENST00000554569 MRC2Q9UBG0 1479 aa14.99□□□□□ -0.01
RIPK3-203ENST00000554569 NEUROD1Q13562 356 aa14.98□□□□□ -0.01
RIPK3-203ENST00000554569 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
RIPK3-203ENST00000554569 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
RIPK3-203ENST00000554569 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
RIPK3-203ENST00000554569 MIER1Q8N108 512 aa14.95□□□□□ -0.02
RIPK3-203ENST00000554569 MTUS2Q5JR59 1369 aa14.94□□□□□ -0.02
RIPK3-203ENST00000554569 FGD6Q6ZV73 1430 aa14.93□□□□□ -0.02
RIPK3-203ENST00000554569 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
RIPK3-203ENST00000554569 CCDC18Q5T9S5 1454 aa14.92□□□□□ -0.02
RIPK3-203ENST00000554569 IFT140Q96RY7 1462 aa14.92□□□□□ -0.02
RIPK3-203ENST00000554569 EHBP1L1Q8N3D4 1523 aa14.89□□□□□ -0.03
RIPK3-203ENST00000554569 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
RIPK3-203ENST00000554569 MYOM3Q5VTT5 1437 aa14.88□□□□□ -0.03
RIPK3-203ENST00000554569 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
RIPK3-203ENST00000554569 MAPK8IP2Q13387 824 aaPredicted RBP14.87□□□□□ -0.03
RIPK3-203ENST00000554569 NCOA2Q15596 1464 aa14.87□□□□□ -0.03
RIPK3-203ENST00000554569 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
RIPK3-203ENST00000554569 PELP1Q8IZL8 1130 aaKnown RBP14.86□□□□□ -0.03
RIPK3-203ENST00000554569 PBRM1Q86U86 1689 aa14.86□□□□□ -0.03
RIPK3-203ENST00000554569 IQGAP2Q13576 1575 aa14.85□□□□□ -0.03
RIPK3-203ENST00000554569 ARHGEF11O15085 1522 aa14.85□□□□□ -0.03
RIPK3-203ENST00000554569 WDR62O43379 1518 aa14.85□□□□□ -0.03
RIPK3-203ENST00000554569 UGGT2Q9NYU1 1516 aa14.85□□□□□ -0.03
RIPK3-203ENST00000554569 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
RIPK3-203ENST00000554569 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.03
RIPK3-203ENST00000554569 GTF3C3Q9Y5Q9 886 aa14.83□□□□□ -0.04
RIPK3-203ENST00000554569 HECW1Q76N89 1606 aa14.83□□□□□ -0.04
RIPK3-203ENST00000554569 TCOF1Q13428 1488 aaKnown RBP14.82□□□□□ -0.04
RIPK3-203ENST00000554569 KIAA0586Q9BVV6 1533 aa14.82□□□□□ -0.04
RIPK3-203ENST00000554569 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
RIPK3-203ENST00000554569 UACAQ9BZF9 1416 aa14.8□□□□□ -0.04
RIPK3-203ENST00000554569 EPRSP07814 1512 aaKnown RBP14.78□□□□□ -0.04
RIPK3-203ENST00000554569 PTPRKQ15262 1439 aa14.78□□□□□ -0.04
RIPK3-203ENST00000554569 PPP1R15AO75807 674 aaPredicted RBP14.78□□□□□ -0.04
RIPK3-203ENST00000554569 NAIPQ13075 1403 aa14.77□□□□□ -0.04
RIPK3-203ENST00000554569 AKNAQ7Z591 1439 aa14.77□□□□□ -0.04
RIPK3-203ENST00000554569 SIN3AQ96ST3 1273 aa14.77□□□□□ -0.05
RIPK3-203ENST00000554569 LRRIQ1Q96JM4 1722 aa14.76□□□□□ -0.05
RIPK3-203ENST00000554569 PTPN23Q9H3S7 1636 aa14.75□□□□□ -0.05
RIPK3-203ENST00000554569 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
RIPK3-203ENST00000554569 MAGI3Q5TCQ9 1506 aa14.74□□□□□ -0.05
RIPK3-203ENST00000554569 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
RIPK3-203ENST00000554569 GRIN2AQ12879 1464 aa14.72□□□□□ -0.05
RIPK3-203ENST00000554569 MAGI1Q96QZ7 1491 aaPredicted RBP14.72□□□□□ -0.05
RIPK3-203ENST00000554569 CDK11AQ9UQ88 783 aaPredicted RBP14.72□□□□□ -0.05
RIPK3-203ENST00000554569 DISP1Q96F81 1524 aa14.71□□□□□ -0.06
RIPK3-203ENST00000554569 KIAA0556O60303 1618 aa14.69□□□□□ -0.06
RIPK3-203ENST00000554569 TONSLQ96HA7 1378 aa14.69□□□□□ -0.06
RIPK3-203ENST00000554569 DMRT2Q9Y5R5 561 aa14.68□□□□□ -0.06
RIPK3-203ENST00000554569 ERCC6Q03468 1493 aa14.68□□□□□ -0.06
RIPK3-203ENST00000554569 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
RIPK3-203ENST00000554569 SYNJ2O15056 1496 aa14.67□□□□□ -0.06
RIPK3-203ENST00000554569 EIF4G3O43432 1585 aaKnown RBP14.65□□□□□ -0.06
RIPK3-203ENST00000554569 CDK13Q14004 1512 aaKnown RBP14.65□□□□□ -0.06
RIPK3-203ENST00000554569 CHMP7Q8WUX9 453 aaPredicted RBP14.64□□□□□ -0.07
RIPK3-203ENST00000554569 NUP153P49790 1475 aaKnown RBP14.63□□□□□ -0.07
RIPK3-203ENST00000554569 CARMIL2Q6F5E8 1435 aa14.63□□□□□ -0.07
RIPK3-203ENST00000554569 RAPGEF6Q8TEU7 1601 aa14.63□□□□□ -0.07
RIPK3-203ENST00000554569 GCC2Q8IWJ2 1684 aa14.62□□□□□ -0.07
RIPK3-203ENST00000554569 NUP160Q12769 1436 aa14.61□□□□□ -0.07
RIPK3-203ENST00000554569 RRP7BPQ9NSQ0 103 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms