RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 KIAA0586Q9BVV6 1533 aa17.36■□□□□ 0.37
PABPN1-203ENST00000553960 UGGT2Q9NYU1 1516 aa17.31■□□□□ 0.36
PABPN1-203ENST00000553960 ARHGAP35Q9NRY4 1499 aa17.31■□□□□ 0.36
PABPN1-203ENST00000553960 SAMD9Q5K651 1589 aa17.3■□□□□ 0.36
PABPN1-203ENST00000553960 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
PABPN1-203ENST00000553960 IQGAP2Q13576 1575 aa17.29■□□□□ 0.36
PABPN1-203ENST00000553960 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
PABPN1-203ENST00000553960 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
PABPN1-203ENST00000553960 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
PABPN1-203ENST00000553960 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
PABPN1-203ENST00000553960 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
PABPN1-203ENST00000553960 CHD1O14646 1710 aa17.16■□□□□ 0.34
PABPN1-203ENST00000553960 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
PABPN1-203ENST00000553960 SHROOM2Q13796 1616 aa17.16■□□□□ 0.34
PABPN1-203ENST00000553960 DISP1Q96F81 1524 aa17.14■□□□□ 0.33
PABPN1-203ENST00000553960 CLASP1Q7Z460 1538 aa17.12■□□□□ 0.33
PABPN1-203ENST00000553960 CASKIN1Q8WXD9 1431 aa17.12■□□□□ 0.33
PABPN1-203ENST00000553960 FYCO1Q9BQS8 1478 aa17.12■□□□□ 0.33
PABPN1-203ENST00000553960 KIAA0556O60303 1618 aa17.11■□□□□ 0.33
PABPN1-203ENST00000553960 CARMIL2Q6F5E8 1435 aa17.08■□□□□ 0.32
PABPN1-203ENST00000553960 JPH4Q96JJ6 628 aa17.08■□□□□ 0.32
PABPN1-203ENST00000553960 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
PABPN1-203ENST00000553960 FBLN2P98095 1184 aa17■□□□□ 0.31
PABPN1-203ENST00000553960 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
PABPN1-203ENST00000553960 PCF11O94913 1555 aaKnown RBP16.99■□□□□ 0.31
PABPN1-203ENST00000553960 TIAM1Q13009 1591 aa16.99■□□□□ 0.31
PABPN1-203ENST00000553960 CCDC18Q5T9S5 1454 aa16.99■□□□□ 0.31
PABPN1-203ENST00000553960 HECW1Q76N89 1606 aa16.96■□□□□ 0.31
PABPN1-203ENST00000553960 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.3
PABPN1-203ENST00000553960 APLP2Q06481 763 aa16.94■□□□□ 0.3
PABPN1-203ENST00000553960 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
PABPN1-203ENST00000553960 ABCA8O94911 1581 aa16.94■□□□□ 0.3
PABPN1-203ENST00000553960 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
PABPN1-203ENST00000553960 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
PABPN1-203ENST00000553960 RAPGEF6Q8TEU7 1601 aa16.92■□□□□ 0.3
PABPN1-203ENST00000553960 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
PABPN1-203ENST00000553960 UHRF1BP1LA0JNW5 1464 aa16.88■□□□□ 0.29
PABPN1-203ENST00000553960 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
PABPN1-203ENST00000553960 LRRIQ1Q96JM4 1722 aa16.87■□□□□ 0.29
PABPN1-203ENST00000553960 NUP153P49790 1475 aaKnown RBP16.87■□□□□ 0.29
PABPN1-203ENST00000553960 P3H3Q8IVL6 736 aa16.87■□□□□ 0.29
PABPN1-203ENST00000553960 PTPRGP23470 1445 aa16.87■□□□□ 0.29
PABPN1-203ENST00000553960 ARHGEF11O15085 1522 aa16.84■□□□□ 0.29
PABPN1-203ENST00000553960 EHBP1L1Q8N3D4 1523 aa16.84■□□□□ 0.29
PABPN1-203ENST00000553960 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
PABPN1-203ENST00000553960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
PABPN1-203ENST00000553960 UACAQ9BZF9 1416 aa16.81■□□□□ 0.28
PABPN1-203ENST00000553960 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
PABPN1-203ENST00000553960 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
PABPN1-203ENST00000553960 ABCC2Q92887 1545 aa16.8■□□□□ 0.28
PABPN1-203ENST00000553960 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
PABPN1-203ENST00000553960 CDK11AQ9UQ88 783 aaPredicted RBP16.77■□□□□ 0.28
PABPN1-203ENST00000553960 KDM5BQ9UGL1 1544 aa16.75■□□□□ 0.27
PABPN1-203ENST00000553960 ATP10BO94823 1461 aa16.75■□□□□ 0.27
PABPN1-203ENST00000553960 ADCY10Q96PN6 1610 aa16.75■□□□□ 0.27
PABPN1-203ENST00000553960 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
PABPN1-203ENST00000553960 MTUS2Q5JR59 1369 aa16.74■□□□□ 0.27
PABPN1-203ENST00000553960 TROQ12816 1431 aaPredicted RBP16.73■□□□□ 0.27
PABPN1-203ENST00000553960 MAGI3Q5TCQ9 1506 aa16.73■□□□□ 0.27
PABPN1-203ENST00000553960 CDK13Q14004 1512 aaKnown RBP16.71■□□□□ 0.27
PABPN1-203ENST00000553960 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
PABPN1-203ENST00000553960 NCOA2Q15596 1464 aa16.69■□□□□ 0.26
PABPN1-203ENST00000553960 MYOM3Q5VTT5 1437 aa16.67■□□□□ 0.26
PABPN1-203ENST00000553960 PHLDB1Q86UU1 1377 aa16.66■□□□□ 0.26
PABPN1-203ENST00000553960 CCNB3Q8WWL7 1395 aa16.66■□□□□ 0.26
PABPN1-203ENST00000553960 TCOF1Q13428 1488 aaKnown RBP16.65■□□□□ 0.26
PABPN1-203ENST00000553960 FGD6Q6ZV73 1430 aa16.64■□□□□ 0.25
PABPN1-203ENST00000553960 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
PABPN1-203ENST00000553960 ABCC10Q5T3U5 1492 aa16.62■□□□□ 0.25
PABPN1-203ENST00000553960 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
PABPN1-203ENST00000553960 ATP1B4Q9UN42 357 aaPredicted RBP16.61■□□□□ 0.25
PABPN1-203ENST00000553960 KIF14Q15058 1648 aa16.59■□□□□ 0.25
PABPN1-203ENST00000553960 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
PABPN1-203ENST00000553960 PPARGC1BQ86YN6 1023 aaKnown RBP16.59■□□□□ 0.25
PABPN1-203ENST00000553960 ITSN2Q9NZM3 1697 aa16.59■□□□□ 0.25
PABPN1-203ENST00000553960 ARAP3Q8WWN8 1544 aa16.58■□□□□ 0.24
PABPN1-203ENST00000553960 GPATCH8Q9UKJ3 1502 aaKnown RBP16.55■□□□□ 0.24
PABPN1-203ENST00000553960 HRCP23327 699 aa16.54■□□□□ 0.24
PABPN1-203ENST00000553960 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
PABPN1-203ENST00000553960 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.24
PABPN1-203ENST00000553960 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.24
PABPN1-203ENST00000553960 PTPN23Q9H3S7 1636 aa16.52■□□□□ 0.24
PABPN1-203ENST00000553960 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.24
PABPN1-203ENST00000553960 WDR7Q9Y4E6 1490 aa16.52■□□□□ 0.23
PABPN1-203ENST00000553960 MAPKBP1O60336 1514 aa16.51■□□□□ 0.23
PABPN1-203ENST00000553960 CDC42BPAQ5VT25 1732 aa16.5■□□□□ 0.23
PABPN1-203ENST00000553960 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
PABPN1-203ENST00000553960 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
PABPN1-203ENST00000553960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.48■□□□□ 0.23
PABPN1-203ENST00000553960 ABCA9Q8IUA7 1624 aa16.48■□□□□ 0.23
PABPN1-203ENST00000553960 PLCH2O75038 1416 aa16.45■□□□□ 0.22
PABPN1-203ENST00000553960 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
PABPN1-203ENST00000553960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
PABPN1-203ENST00000553960 HNRNPUL2Q1KMD3 747 aaKnown RBP16.45■□□□□ 0.22
PABPN1-203ENST00000553960 RSPH4AQ5TD94 716 aa16.45■□□□□ 0.22
PABPN1-203ENST00000553960 DNMT1P26358 1616 aaKnown RBP16.45■□□□□ 0.22
PABPN1-203ENST00000553960 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
PABPN1-203ENST00000553960 ARHGEF5Q12774 1597 aa16.44■□□□□ 0.22
PABPN1-203ENST00000553960 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
PABPN1-203ENST00000553960 ROCK1Q13464 1354 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms