RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
AL049839.2-201ENST00000553947 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
AL049839.2-201ENST00000553947 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
AL049839.2-201ENST00000553947 KIF21AQ7Z4S6 1674 aa13.36□□□□□ -0.27
AL049839.2-201ENST00000553947 TDRD9Q8NDG6 1382 aaKnown RBP13.35□□□□□ -0.27
AL049839.2-201ENST00000553947 RRBP1Q9P2E9 1410 aaKnown RBP13.34□□□□□ -0.27
AL049839.2-201ENST00000553947 CUL7Q14999 1698 aa13.33□□□□□ -0.28
AL049839.2-201ENST00000553947 TIAM1Q13009 1591 aa13.32□□□□□ -0.28
AL049839.2-201ENST00000553947 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
AL049839.2-201ENST00000553947 FHOD3Q2V2M9 1422 aa13.3□□□□□ -0.28
AL049839.2-201ENST00000553947 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
AL049839.2-201ENST00000553947 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
AL049839.2-201ENST00000553947 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
AL049839.2-201ENST00000553947 ANP32EQ9BTT0 268 aa13.28□□□□□ -0.28
AL049839.2-201ENST00000553947 MAP3K1Q13233 1512 aa13.28□□□□□ -0.28
AL049839.2-201ENST00000553947 CTTNBP2Q8WZ74 1663 aa13.27□□□□□ -0.28
AL049839.2-201ENST00000553947 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.29
AL049839.2-201ENST00000553947 LRRC9Q6ZRR7 1453 aa13.27□□□□□ -0.29
AL049839.2-201ENST00000553947 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.29
AL049839.2-201ENST00000553947 ATP1B4Q9UN42 357 aaPredicted RBP13.26□□□□□ -0.29
AL049839.2-201ENST00000553947 TARBP1Q13395 1621 aaKnown RBP13.25□□□□□ -0.29
AL049839.2-201ENST00000553947 DHX57Q6P158 1386 aaKnown RBP13.25□□□□□ -0.29
AL049839.2-201ENST00000553947 ITGAEP38570 1179 aa13.25□□□□□ -0.29
AL049839.2-201ENST00000553947 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
AL049839.2-201ENST00000553947 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
AL049839.2-201ENST00000553947 CFAP43Q8NDM7 1665 aa13.23□□□□□ -0.29
AL049839.2-201ENST00000553947 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
AL049839.2-201ENST00000553947 CASKIN1Q8WXD9 1431 aa13.2□□□□□ -0.3
AL049839.2-201ENST00000553947 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
AL049839.2-201ENST00000553947 AQRO60306 1485 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■□□ 18.4
AL049839.2-201ENST00000553947 MRC2Q9UBG0 1479 aa13.18□□□□□ -0.3
AL049839.2-201ENST00000553947 SAMD9Q5K651 1589 aa13.17□□□□□ -0.3
AL049839.2-201ENST00000553947 SNAPC4Q5SXM2 1469 aa13.17□□□□□ -0.3
AL049839.2-201ENST00000553947 FMN1Q68DA7 1419 aa13.16□□□□□ -0.3
AL049839.2-201ENST00000553947 PBRM1Q86U86 1689 aa13.15□□□□□ -0.3
AL049839.2-201ENST00000553947 CLSPNQ9HAW4 1339 aa13.15□□□□□ -0.3
AL049839.2-201ENST00000553947 FAM50AQ14320 339 aaKnown RBP13.15□□□□□ -0.3
AL049839.2-201ENST00000553947 RAB3GAP2Q9H2M9 1393 aa13.14□□□□□ -0.31
AL049839.2-201ENST00000553947 LRRIQ1Q96JM4 1722 aa13.13□□□□□ -0.31
AL049839.2-201ENST00000553947 ZNF608Q9ULD9 1512 aaPredicted RBP13.12□□□□□ -0.31
AL049839.2-201ENST00000553947 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
AL049839.2-201ENST00000553947 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
AL049839.2-201ENST00000553947 WDR62O43379 1518 aa13.09□□□□□ -0.31
AL049839.2-201ENST00000553947 SETD5Q9C0A6 1442 aa13.09□□□□□ -0.31
AL049839.2-201ENST00000553947 IFT140Q96RY7 1462 aa13.07□□□□□ -0.32
AL049839.2-201ENST00000553947 MTUS2Q5JR59 1369 aa13.07□□□□□ -0.32
AL049839.2-201ENST00000553947 MAPKBP1O60336 1514 aa13.07□□□□□ -0.32
AL049839.2-201ENST00000553947 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
AL049839.2-201ENST00000553947 FGD6Q6ZV73 1430 aa13.05□□□□□ -0.32
AL049839.2-201ENST00000553947 ERICH6Q7L0X2 663 aa13.04□□□□□ -0.32
AL049839.2-201ENST00000553947 MAGI3Q5TCQ9 1506 aa13.03□□□□□ -0.32
AL049839.2-201ENST00000553947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.03□□□□□ -0.32
AL049839.2-201ENST00000553947 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
AL049839.2-201ENST00000553947 MIER1Q8N108 512 aa13.02□□□□□ -0.32
AL049839.2-201ENST00000553947 THOC2Q8NI27 1593 aaKnown RBP13.02□□□□□ -0.32
AL049839.2-201ENST00000553947 TSHZ2Q9NRE2 1034 aa13.02□□□□□ -0.33
AL049839.2-201ENST00000553947 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
AL049839.2-201ENST00000553947 PTPRKQ15262 1439 aa13.01□□□□□ -0.33
AL049839.2-201ENST00000553947 EIF4G3O43432 1585 aaKnown RBP13□□□□□ -0.33
AL049839.2-201ENST00000553947 EHBP1L1Q8N3D4 1523 aa12.99□□□□□ -0.33
AL049839.2-201ENST00000553947 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
AL049839.2-201ENST00000553947 UGGT2Q9NYU1 1516 aa12.98□□□□□ -0.33
AL049839.2-201ENST00000553947 ARID3CA6NKF2 412 aa12.98□□□□□ -0.33
AL049839.2-201ENST00000553947 SUPT6HQ7KZ85 1726 aaKnown RBP12.98□□□□□ -0.33
AL049839.2-201ENST00000553947 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
AL049839.2-201ENST00000553947 SUPT16HQ9Y5B9 1047 aaKnown RBP12.97□□□□□ -0.33
AL049839.2-201ENST00000553947 EPRSP07814 1512 aaKnown RBP12.97□□□□□ -0.33
AL049839.2-201ENST00000553947 CDK13Q14004 1512 aaKnown RBP12.97□□□□□ -0.33
AL049839.2-201ENST00000553947 HECW1Q76N89 1606 aa12.97□□□□□ -0.33
AL049839.2-201ENST00000553947 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
AL049839.2-201ENST00000553947 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
AL049839.2-201ENST00000553947 GRIN2AQ12879 1464 aa12.96□□□□□ -0.33
AL049839.2-201ENST00000553947 KIAA0586Q9BVV6 1533 aa12.96□□□□□ -0.34
AL049839.2-201ENST00000553947 DISP1Q96F81 1524 aa12.95□□□□□ -0.34
AL049839.2-201ENST00000553947 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
AL049839.2-201ENST00000553947 KIAA0556O60303 1618 aa12.93□□□□□ -0.34
AL049839.2-201ENST00000553947 HFM1A2PYH4 1435 aa12.92□□□□□ -0.34
AL049839.2-201ENST00000553947 NAIPQ13075 1403 aa12.9□□□□□ -0.34
AL049839.2-201ENST00000553947 CEP170Q5SW79 1584 aa12.9□□□□□ -0.35
AL049839.2-201ENST00000553947 MAGI1Q96QZ7 1491 aaPredicted RBP12.9□□□□□ -0.35
AL049839.2-201ENST00000553947 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.35
AL049839.2-201ENST00000553947 FBLN2P98095 1184 aa12.89□□□□□ -0.35
AL049839.2-201ENST00000553947 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
AL049839.2-201ENST00000553947 NUP153P49790 1475 aaKnown RBP12.88□□□□□ -0.35
AL049839.2-201ENST00000553947 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
AL049839.2-201ENST00000553947 CHIC2Q9UKJ5 165 aa12.87□□□□□ -0.35
AL049839.2-201ENST00000553947 RRP7BPQ9NSQ0 103 aa12.87□□□□□ -0.35
AL049839.2-201ENST00000553947 UACAQ9BZF9 1416 aa12.86□□□□□ -0.35
AL049839.2-201ENST00000553947 RAPGEF6Q8TEU7 1601 aa12.85□□□□□ -0.35
AL049839.2-201ENST00000553947 MIA2Q96PC5 1412 aa12.83□□□□□ -0.36
AL049839.2-201ENST00000553947 PLB1Q6P1J6 1458 aa12.82□□□□□ -0.36
AL049839.2-201ENST00000553947 NUP160Q12769 1436 aa12.82□□□□□ -0.36
AL049839.2-201ENST00000553947 PPP1R15AO75807 674 aaPredicted RBP12.82□□□□□ -0.36
AL049839.2-201ENST00000553947 KDM6BO15054 1643 aa12.82□□□□□ -0.36
AL049839.2-201ENST00000553947 BCANQ96GW7 911 aa12.82□□□□□ -0.36
AL049839.2-201ENST00000553947 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
AL049839.2-201ENST00000553947 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
AL049839.2-201ENST00000553947 ZNF644Q9H582 1327 aaPredicted RBP12.81□□□□□ -0.36
AL049839.2-201ENST00000553947 PRG4Q92954 1404 aaPredicted RBP12.8□□□□□ -0.36
AL049839.2-201ENST00000553947 GCC2Q8IWJ2 1684 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms