RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 TNIKQ9UKE5 1360 aa14.56□□□□□ -0.08
MARK3-207ENST00000553942 ADAMTS12P58397 1594 aa14.55□□□□□ -0.08
MARK3-207ENST00000553942 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
MARK3-207ENST00000553942 CUL7Q14999 1698 aa14.53□□□□□ -0.08
MARK3-207ENST00000553942 GRIN2AQ12879 1464 aa14.49□□□□□ -0.09
MARK3-207ENST00000553942 CLIP1P30622 1438 aa14.49□□□□□ -0.09
MARK3-207ENST00000553942 SYNJ2O15056 1496 aa14.49□□□□□ -0.09
MARK3-207ENST00000553942 MAGI1Q96QZ7 1491 aaPredicted RBP14.48□□□□□ -0.09
MARK3-207ENST00000553942 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
MARK3-207ENST00000553942 CHD1O14646 1710 aa14.45□□□□□ -0.1
MARK3-207ENST00000553942 ARHGAP35Q9NRY4 1499 aa14.42□□□□□ -0.1
MARK3-207ENST00000553942 ARID3CA6NKF2 412 aa14.42□□□□□ -0.1
MARK3-207ENST00000553942 ATP1B4Q9UN42 357 aaPredicted RBP14.42□□□□□ -0.1
MARK3-207ENST00000553942 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
MARK3-207ENST00000553942 FHOD3Q2V2M9 1422 aa14.42□□□□□ -0.1
MARK3-207ENST00000553942 CTTNBP2Q8WZ74 1663 aa14.39□□□□□ -0.11
MARK3-207ENST00000553942 JPH4Q96JJ6 628 aa14.38□□□□□ -0.11
MARK3-207ENST00000553942 IQGAP2Q13576 1575 aa14.35□□□□□ -0.11
MARK3-207ENST00000553942 NUP160Q12769 1436 aa14.35□□□□□ -0.11
MARK3-207ENST00000553942 KIAA0586Q9BVV6 1533 aa14.34□□□□□ -0.11
MARK3-207ENST00000553942 ERCC6L2Q5T890 1561 aa14.32□□□□□ -0.12
MARK3-207ENST00000553942 OSCARQ8IYS5 282 aa14.29□□□□□ -0.12
MARK3-207ENST00000553942 DISP1Q96F81 1524 aa14.29□□□□□ -0.12
MARK3-207ENST00000553942 PRG4Q92954 1404 aaPredicted RBP14.28□□□□□ -0.12
MARK3-207ENST00000553942 VPS8Q8N3P4 1428 aa14.28□□□□□ -0.12
MARK3-207ENST00000553942 KANK4Q5T7N3 995 aaPredicted RBP14.26□□□□□ -0.13
MARK3-207ENST00000553942 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
MARK3-207ENST00000553942 UGGT2Q9NYU1 1516 aa14.23□□□□□ -0.13
MARK3-207ENST00000553942 KIAA0556O60303 1618 aa14.22□□□□□ -0.13
MARK3-207ENST00000553942 CLASP1Q7Z460 1538 aa14.21□□□□□ -0.13
MARK3-207ENST00000553942 PCF11O94913 1555 aaKnown RBP14.21□□□□□ -0.13
MARK3-207ENST00000553942 PLB1Q6P1J6 1458 aa14.2□□□□□ -0.14
MARK3-207ENST00000553942 EFCAB5A4FU69 1503 aa14.19□□□□□ -0.14
MARK3-207ENST00000553942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
MARK3-207ENST00000553942 APLP2Q06481 763 aa14.18□□□□□ -0.14
MARK3-207ENST00000553942 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
MARK3-207ENST00000553942 PCGF6Q9BYE7 350 aa14.16□□□□□ -0.14
MARK3-207ENST00000553942 CARMIL2Q6F5E8 1435 aa14.16□□□□□ -0.14
MARK3-207ENST00000553942 CDK13Q14004 1512 aaKnown RBP14.14□□□□□ -0.15
MARK3-207ENST00000553942 PTPRGP23470 1445 aa14.14□□□□□ -0.15
MARK3-207ENST00000553942 FMN1Q68DA7 1419 aa14.14□□□□□ -0.15
MARK3-207ENST00000553942 SHROOM2Q13796 1616 aa14.13□□□□□ -0.15
MARK3-207ENST00000553942 LRRIQ1Q96JM4 1722 aa14.13□□□□□ -0.15
MARK3-207ENST00000553942 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
MARK3-207ENST00000553942 CYB5RLQ6IPT4 315 aa14.1□□□□□ -0.15
MARK3-207ENST00000553942 NUP153P49790 1475 aaKnown RBP14.08□□□□□ -0.16
MARK3-207ENST00000553942 FYCO1Q9BQS8 1478 aa14.06□□□□□ -0.16
MARK3-207ENST00000553942 MAGI3Q5TCQ9 1506 aa14.06□□□□□ -0.16
MARK3-207ENST00000553942 RAPGEF6Q8TEU7 1601 aa14.05□□□□□ -0.16
MARK3-207ENST00000553942 EPRSP07814 1512 aaKnown RBP14.05□□□□□ -0.16
MARK3-207ENST00000553942 TIAM1Q13009 1591 aa14.05□□□□□ -0.16
MARK3-207ENST00000553942 ARHGEF11O15085 1522 aa14.04□□□□□ -0.16
MARK3-207ENST00000553942 KCNH8Q96L42 1107 aa14.02□□□□□ -0.17
MARK3-207ENST00000553942 MTUS2Q5JR59 1369 aa14.02□□□□□ -0.17
MARK3-207ENST00000553942 UACAQ9BZF9 1416 aa14.02□□□□□ -0.17
MARK3-207ENST00000553942 LRRC9Q6ZRR7 1453 aa14.02□□□□□ -0.17
MARK3-207ENST00000553942 ITGAEP38570 1179 aa14.01□□□□□ -0.17
MARK3-207ENST00000553942 ABCA8O94911 1581 aa14.01□□□□□ -0.17
MARK3-207ENST00000553942 ATP10BO94823 1461 aa14.01□□□□□ -0.17
MARK3-207ENST00000553942 HECW1Q76N89 1606 aa14□□□□□ -0.17
MARK3-207ENST00000553942 TRIM26Q12899 539 aaPredicted RBP14□□□□□ -0.17
MARK3-207ENST00000553942 PHLDB1Q86UU1 1377 aa13.99□□□□□ -0.17
MARK3-207ENST00000553942 RIMBP3CA6NJZ7 1639 aa13.98□□□□□ -0.17
MARK3-207ENST00000553942 RIMBP3BA6NNM3 1639 aa13.98□□□□□ -0.17
MARK3-207ENST00000553942 RIMBP3Q9UFD9 1639 aa13.98□□□□□ -0.17
MARK3-207ENST00000553942 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
MARK3-207ENST00000553942 CFAP43Q8NDM7 1665 aa13.96□□□□□ -0.17
MARK3-207ENST00000553942 ADCY10Q96PN6 1610 aa13.95□□□□□ -0.18
MARK3-207ENST00000553942 ABCC2Q92887 1545 aa13.94□□□□□ -0.18
MARK3-207ENST00000553942 PLEKHD1A6NEE1 506 aa13.93□□□□□ -0.18
MARK3-207ENST00000553942 FAM50AQ14320 339 aaKnown RBP13.93□□□□□ -0.18
MARK3-207ENST00000553942 ZNF644Q9H582 1327 aaPredicted RBP13.91□□□□□ -0.18
MARK3-207ENST00000553942 CCDC18Q5T9S5 1454 aa13.91□□□□□ -0.18
MARK3-207ENST00000553942 KIF14Q15058 1648 aa13.91□□□□□ -0.18
MARK3-207ENST00000553942 NCOA2Q15596 1464 aa13.91□□□□□ -0.18
MARK3-207ENST00000553942 ZNF777Q9ULD5 760 aaPredicted RBP13.9□□□□□ -0.18
MARK3-207ENST00000553942 ZCCHC11Q5TAX3 1644 aaKnown RBP13.89□□□□□ -0.19
MARK3-207ENST00000553942 MAP3K1Q13233 1512 aa13.88□□□□□ -0.19
MARK3-207ENST00000553942 CDK11AQ9UQ88 783 aaPredicted RBP13.88□□□□□ -0.19
MARK3-207ENST00000553942 TROQ12816 1431 aaPredicted RBP13.86□□□□□ -0.19
MARK3-207ENST00000553942 EHBP1L1Q8N3D4 1523 aa13.86□□□□□ -0.19
MARK3-207ENST00000553942 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
MARK3-207ENST00000553942 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
MARK3-207ENST00000553942 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
MARK3-207ENST00000553942 UHRF1BP1LA0JNW5 1464 aa13.83□□□□□ -0.2
MARK3-207ENST00000553942 ASXL2Q76L83 1435 aa13.83□□□□□ -0.2
MARK3-207ENST00000553942 CHIC2Q9UKJ5 165 aa13.83□□□□□ -0.2
MARK3-207ENST00000553942 CCNB3Q8WWL7 1395 aa13.82□□□□□ -0.2
MARK3-207ENST00000553942 SUPT6HQ7KZ85 1726 aaKnown RBP13.82□□□□□ -0.2
MARK3-207ENST00000553942 FGD6Q6ZV73 1430 aa13.8□□□□□ -0.2
MARK3-207ENST00000553942 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
MARK3-207ENST00000553942 CFDP1Q9UEE9 299 aaPredicted RBP13.8□□□□□ -0.2
MARK3-207ENST00000553942 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
MARK3-207ENST00000553942 TTC37Q6PGP7 1564 aa13.79□□□□□ -0.2
MARK3-207ENST00000553942 RRBP1Q9P2E9 1410 aaKnown RBP13.78□□□□□ -0.2
MARK3-207ENST00000553942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.78□□□□□ -0.2
MARK3-207ENST00000553942 GPATCH8Q9UKJ3 1502 aaKnown RBP13.78□□□□□ -0.2
MARK3-207ENST00000553942 HNRNPMP52272 730 aaKnown RBP eCLIP13.77□□□□□ -0.212e-7■■■■■ 29.2
MARK3-207ENST00000553942 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.21
MARK3-207ENST00000553942 WDR7Q9Y4E6 1490 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms