RNA–Protein interactions for RNA: ENST00000553772.5

COCH-206, Transcript of cochlin, humanhuman

TSL 4

Gene COCH, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-206ENST00000553772 RIMBP3Q9UFD9 1639 aa33.23■■■□□ 2.91
COCH-206ENST00000553772 KIAA0586Q9BVV6 1533 aa33.23■■■□□ 2.91
COCH-206ENST00000553772 SHROOM2Q13796 1616 aa33.21■■■□□ 2.91
COCH-206ENST00000553772 FAM9AQ8IZU1 332 aaPredicted RBP33.13■■■□□ 2.89
COCH-206ENST00000553772 JPH4Q96JJ6 628 aa33.11■■■□□ 2.89
COCH-206ENST00000553772 KIF21BO75037 1637 aa33.06■■■□□ 2.88
COCH-206ENST00000553772 IQGAP2Q13576 1575 aa33.06■■■□□ 2.88
COCH-206ENST00000553772 CTTNBP2Q8WZ74 1663 aa33.04■■■□□ 2.88
COCH-206ENST00000553772 PRG4Q92954 1404 aaPredicted RBP33.01■■■□□ 2.87
COCH-206ENST00000553772 ARAP1Q96P48 1450 aa33■■■□□ 2.87
COCH-206ENST00000553772 ERCC6L2Q5T890 1561 aa32.98■■■□□ 2.87
COCH-206ENST00000553772 UGGT2Q9NYU1 1516 aa32.92■■■□□ 2.86
COCH-206ENST00000553772 CYB5RLQ6IPT4 315 aa32.88■■■□□ 2.85
COCH-206ENST00000553772 GOLGA3Q08378 1498 aa32.86■■■□□ 2.85
COCH-206ENST00000553772 CARMIL2Q6F5E8 1435 aa32.85■■■□□ 2.85
COCH-206ENST00000553772 DISP1Q96F81 1524 aa32.8■■■□□ 2.84
COCH-206ENST00000553772 KIAA0556O60303 1618 aa32.74■■■□□ 2.83
COCH-206ENST00000553772 TNIKQ9UKE5 1360 aa32.72■■■□□ 2.83
COCH-206ENST00000553772 UBTFP17480 764 aaKnown RBP32.69■■■□□ 2.82
COCH-206ENST00000553772 PTPRGP23470 1445 aa32.66■■■□□ 2.82
COCH-206ENST00000553772 SAMD9Q5K651 1589 aa32.63■■■□□ 2.81
COCH-206ENST00000553772 EHMT2Q96KQ7 1210 aa32.61■■■□□ 2.81
COCH-206ENST00000553772 EFCAB5A4FU69 1503 aa32.55■■■□□ 2.8
COCH-206ENST00000553772 ADCY10Q96PN6 1610 aa32.49■■■□□ 2.79
COCH-206ENST00000553772 UACAQ9BZF9 1416 aa32.47■■■□□ 2.79
COCH-206ENST00000553772 UHRF1BP1LA0JNW5 1464 aa32.47■■■□□ 2.79
COCH-206ENST00000553772 TTBK1Q5TCY1 1321 aaPredicted RBP32.46■■■□□ 2.79
COCH-206ENST00000553772 RANGAP1P46060 587 aaPredicted RBP32.44■■■□□ 2.78
COCH-206ENST00000553772 P3H3Q8IVL6 736 aa32.43■■■□□ 2.78
COCH-206ENST00000553772 ABCC2Q92887 1545 aa32.41■■■□□ 2.78
COCH-206ENST00000553772 ABCA8O94911 1581 aa32.38■■■□□ 2.77
COCH-206ENST00000553772 ARHGAP35Q9NRY4 1499 aa32.37■■■□□ 2.77
COCH-206ENST00000553772 FHOD3Q2V2M9 1422 aa32.37■■■□□ 2.77
COCH-206ENST00000553772 PLB1Q6P1J6 1458 aa32.35■■■□□ 2.77
COCH-206ENST00000553772 NPM1P06748 294 aaKnown RBP eCLIP32.35■■■□□ 2.77
COCH-206ENST00000553772 KDM5BQ9UGL1 1544 aa32.3■■■□□ 2.76
COCH-206ENST00000553772 MAPKBP1O60336 1514 aa32.29■■■□□ 2.76
COCH-206ENST00000553772 LOC105371045A0A1W2PR82 267 aa32.26■■■□□ 2.75
COCH-206ENST00000553772 CLIP1P30622 1438 aa32.26■■■□□ 2.75
COCH-206ENST00000553772 RAPGEF6Q8TEU7 1601 aa32.25■■■□□ 2.75
COCH-206ENST00000553772 FMN1Q68DA7 1419 aa32.23■■■□□ 2.75
COCH-206ENST00000553772 ZCCHC11Q5TAX3 1644 aaKnown RBP32.2■■■□□ 2.75
COCH-206ENST00000553772 CEP162Q5TB80 1403 aa32.17■■■□□ 2.74
COCH-206ENST00000553772 NUP153P49790 1475 aaKnown RBP32.12■■■□□ 2.73
COCH-206ENST00000553772 ASXL2Q76L83 1435 aa32.1■■■□□ 2.73
COCH-206ENST00000553772 TRHP20396 242 aaPredicted RBP32.1■■■□□ 2.73
COCH-206ENST00000553772 ATP10BO94823 1461 aa32.09■■■□□ 2.73
COCH-206ENST00000553772 ABCC10Q5T3U5 1492 aa32.08■■■□□ 2.73
COCH-206ENST00000553772 KIF13AQ9H1H9 1805 aa32.05■■■□□ 2.72
COCH-206ENST00000553772 HECW1Q76N89 1606 aa32.04■■■□□ 2.72
COCH-206ENST00000553772 DIP2BQ9P265 1576 aa32.02■■■□□ 2.72
COCH-206ENST00000553772 WDR7Q9Y4E6 1490 aa32■■■□□ 2.71
COCH-206ENST00000553772 CASKIN1Q8WXD9 1431 aa32■■■□□ 2.71
COCH-206ENST00000553772 PCF11O94913 1555 aaKnown RBP31.95■■■□□ 2.71
COCH-206ENST00000553772 ARID3CA6NKF2 412 aa31.95■■■□□ 2.71
COCH-206ENST00000553772 GLI2P10070 1586 aa31.94■■■□□ 2.7
COCH-206ENST00000553772 FAM69CQ0P6D2 419 aa31.94■■■□□ 2.7
COCH-206ENST00000553772 FYCO1Q9BQS8 1478 aa31.94■■■□□ 2.7
COCH-206ENST00000553772 EPRSP07814 1512 aaKnown RBP31.94■■■□□ 2.7
COCH-206ENST00000553772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.9■■■□□ 2.7
COCH-206ENST00000553772 HNRNPUL2Q1KMD3 747 aaKnown RBP31.9■■■□□ 2.7
COCH-206ENST00000553772 ATP1B4Q9UN42 357 aaPredicted RBP31.88■■■□□ 2.69
COCH-206ENST00000553772 CDK13Q14004 1512 aaKnown RBP31.88■■■□□ 2.69
COCH-206ENST00000553772 LRRIQ1Q96JM4 1722 aa31.87■■■□□ 2.69
COCH-206ENST00000553772 CCDC18Q5T9S5 1454 aa31.86■■■□□ 2.69
COCH-206ENST00000553772 PLEKHD1A6NEE1 506 aa31.84■■■□□ 2.69
COCH-206ENST00000553772 MAP3K4Q9Y6R4 1608 aa31.79■■■□□ 2.68
COCH-206ENST00000553772 VPS8Q8N3P4 1428 aa31.79■■■□□ 2.68
COCH-206ENST00000553772 CDK11AQ9UQ88 783 aaPredicted RBP31.79■■■□□ 2.68
COCH-206ENST00000553772 KCNH8Q96L42 1107 aa31.78■■■□□ 2.68
COCH-206ENST00000553772 CFAP43Q8NDM7 1665 aa31.76■■■□□ 2.67
COCH-206ENST00000553772 TSPOAP1O95153 1857 aa31.72■■■□□ 2.67
COCH-206ENST00000553772 ABCA9Q8IUA7 1624 aa31.72■■■□□ 2.67
COCH-206ENST00000553772 TROQ12816 1431 aaPredicted RBP31.68■■■□□ 2.66
COCH-206ENST00000553772 PPRC1Q5VV67 1664 aaKnown RBP31.68■■■□□ 2.66
COCH-206ENST00000553772 CD109Q6YHK3 1445 aa31.66■■■□□ 2.66
COCH-206ENST00000553772 MAGI3Q5TCQ9 1506 aa31.64■■■□□ 2.66
COCH-206ENST00000553772 TEX14Q8IWB6 1497 aa31.62■■■□□ 2.65
COCH-206ENST00000553772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.61■■■□□ 2.656e-7■■□□□ 11.4
COCH-206ENST00000553772 KIF14Q15058 1648 aa31.6■■■□□ 2.65
COCH-206ENST00000553772 TTC37Q6PGP7 1564 aa31.56■■■□□ 2.64
COCH-206ENST00000553772 MAP3K1Q13233 1512 aa31.55■■■□□ 2.64
COCH-206ENST00000553772 TIAM1Q13009 1591 aa31.54■■■□□ 2.64
COCH-206ENST00000553772 MTUS2Q5JR59 1369 aa31.5■■■□□ 2.63
COCH-206ENST00000553772 EHBP1L1Q8N3D4 1523 aa31.49■■■□□ 2.63
COCH-206ENST00000553772 PHLDB1Q86UU1 1377 aa31.46■■■□□ 2.63
COCH-206ENST00000553772 MYO5CQ9NQX4 1742 aa31.46■■■□□ 2.63
COCH-206ENST00000553772 ARAP3Q8WWN8 1544 aa31.45■■■□□ 2.63
COCH-206ENST00000553772 PLCH2O75038 1416 aa31.44■■■□□ 2.62
COCH-206ENST00000553772 NEO1Q92859 1461 aa31.44■■■□□ 2.62
COCH-206ENST00000553772 KDM6BO15054 1643 aa31.43■■■□□ 2.62
COCH-206ENST00000553772 CFAP74Q9C0B2 1584 aa31.4■■■□□ 2.62
COCH-206ENST00000553772 LRRC9Q6ZRR7 1453 aa31.4■■■□□ 2.62
COCH-206ENST00000553772 APLP2Q06481 763 aa31.38■■■□□ 2.61
COCH-206ENST00000553772 FANCAO15360 1455 aa31.38■■■□□ 2.61
COCH-206ENST00000553772 CDC42BPAQ5VT25 1732 aa31.35■■■□□ 2.61
COCH-206ENST00000553772 SUPT6HQ7KZ85 1726 aaKnown RBP31.35■■■□□ 2.61
COCH-206ENST00000553772 PREX2Q70Z35 1606 aa31.35■■■□□ 2.61
COCH-206ENST00000553772 CDC42BPBQ9Y5S2 1711 aa31.34■■■□□ 2.61
COCH-206ENST00000553772 COL17A1Q9UMD9 1497 aaPredicted RBP31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms