RNA–Protein interactions for RNA: ENST00000553630.1

CALM1-206, Transcript of calmodulin 1, humanhuman

TSL 5

Gene CALM1, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-206ENST00000553630 CLIP1P30622 1438 aa28.92■■■□□ 2.22
CALM1-206ENST00000553630 CHD1O14646 1710 aa28.91■■■□□ 2.22
CALM1-206ENST00000553630 CHMP7Q8WUX9 453 aaPredicted RBP28.88■■■□□ 2.21
CALM1-206ENST00000553630 FBLN2P98095 1184 aa28.87■■■□□ 2.21
CALM1-206ENST00000553630 CEP170Q5SW79 1584 aa28.85■■■□□ 2.21
CALM1-206ENST00000553630 IQGAP2Q13576 1575 aa28.8■■■□□ 2.2
CALM1-206ENST00000553630 ARHGAP35Q9NRY4 1499 aa28.77■■■□□ 2.2
CALM1-206ENST00000553630 NUP160Q12769 1436 aa28.76■■■□□ 2.2
CALM1-206ENST00000553630 ARAP1Q96P48 1450 aa28.75■■■□□ 2.19
CALM1-206ENST00000553630 KIAA0586Q9BVV6 1533 aa28.73■■■□□ 2.19
CALM1-206ENST00000553630 EFCAB5A4FU69 1503 aa28.69■■■□□ 2.18
CALM1-206ENST00000553630 SAMD9Q5K651 1589 aa28.68■■■□□ 2.18
CALM1-206ENST00000553630 UGGT2Q9NYU1 1516 aa28.63■■■□□ 2.17
CALM1-206ENST00000553630 P3H3Q8IVL6 736 aa28.6■■■□□ 2.17
CALM1-206ENST00000553630 FHOD3Q2V2M9 1422 aa28.6■■■□□ 2.17
CALM1-206ENST00000553630 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
CALM1-206ENST00000553630 KIAA0556O60303 1618 aa28.53■■■□□ 2.16
CALM1-206ENST00000553630 CLASP1Q7Z460 1538 aa28.52■■■□□ 2.16
CALM1-206ENST00000553630 DISP1Q96F81 1524 aa28.52■■■□□ 2.16
CALM1-206ENST00000553630 SHROOM2Q13796 1616 aa28.47■■■□□ 2.15
CALM1-206ENST00000553630 JPH4Q96JJ6 628 aa28.45■■■□□ 2.15
CALM1-206ENST00000553630 PCF11O94913 1555 aaKnown RBP28.44■■■□□ 2.14
CALM1-206ENST00000553630 PRG4Q92954 1404 aaPredicted RBP28.37■■■□□ 2.13
CALM1-206ENST00000553630 FMN1Q68DA7 1419 aa28.36■■■□□ 2.13
CALM1-206ENST00000553630 CARMIL2Q6F5E8 1435 aa28.36■■■□□ 2.13
CALM1-206ENST00000553630 PPARGC1BQ86YN6 1023 aaKnown RBP28.34■■■□□ 2.13
CALM1-206ENST00000553630 ERCC6L2Q5T890 1561 aa28.34■■■□□ 2.13
CALM1-206ENST00000553630 FYCO1Q9BQS8 1478 aa28.31■■■□□ 2.12
CALM1-206ENST00000553630 CASKIN1Q8WXD9 1431 aa28.31■■■□□ 2.12
CALM1-206ENST00000553630 TTBK1Q5TCY1 1321 aaPredicted RBP28.3■■■□□ 2.12
CALM1-206ENST00000553630 OSCARQ8IYS5 282 aa28.27■■■□□ 2.12
CALM1-206ENST00000553630 LRRIQ1Q96JM4 1722 aa28.27■■■□□ 2.12
CALM1-206ENST00000553630 CFAP43Q8NDM7 1665 aa28.23■■■□□ 2.11
CALM1-206ENST00000553630 ATP1B4Q9UN42 357 aaPredicted RBP28.22■■■□□ 2.11
CALM1-206ENST00000553630 TIAM1Q13009 1591 aa28.21■■■□□ 2.11
CALM1-206ENST00000553630 APLP2Q06481 763 aa28.21■■■□□ 2.11
CALM1-206ENST00000553630 HECW1Q76N89 1606 aa28.21■■■□□ 2.11
CALM1-206ENST00000553630 RAPGEF6Q8TEU7 1601 aa28.2■■■□□ 2.1
CALM1-206ENST00000553630 PLB1Q6P1J6 1458 aa28.16■■■□□ 2.1
CALM1-206ENST00000553630 MAP3K1Q13233 1512 aa28.14■■■□□ 2.1
CALM1-206ENST00000553630 ABCA8O94911 1581 aa28.13■■■□□ 2.09
CALM1-206ENST00000553630 PTPRGP23470 1445 aa28.12■■■□□ 2.09
CALM1-206ENST00000553630 KANK4Q5T7N3 995 aaPredicted RBP28.1■■■□□ 2.09
CALM1-206ENST00000553630 NUP153P49790 1475 aaKnown RBP28.1■■■□□ 2.09
CALM1-206ENST00000553630 CDK13Q14004 1512 aaKnown RBP28.08■■■□□ 2.09
CALM1-206ENST00000553630 EPRSP07814 1512 aaKnown RBP28.07■■■□□ 2.08
CALM1-206ENST00000553630 CCDC18Q5T9S5 1454 aa28.06■■■□□ 2.08
CALM1-206ENST00000553630 ARID3CA6NKF2 412 aa28.05■■■□□ 2.08
CALM1-206ENST00000553630 LRRC9Q6ZRR7 1453 aa28.04■■■□□ 2.08
CALM1-206ENST00000553630 MAGI3Q5TCQ9 1506 aa27.98■■■□□ 2.07
CALM1-206ENST00000553630 UACAQ9BZF9 1416 aa27.97■■■□□ 2.07
CALM1-206ENST00000553630 ABCC2Q92887 1545 aa27.95■■■□□ 2.06
CALM1-206ENST00000553630 ARHGEF11O15085 1522 aa27.93■■■□□ 2.06
CALM1-206ENST00000553630 EHBP1L1Q8N3D4 1523 aa27.92■■■□□ 2.06
CALM1-206ENST00000553630 TRIM26Q12899 539 aaPredicted RBP27.92■■■□□ 2.06
CALM1-206ENST00000553630 MTUS2Q5JR59 1369 aa27.89■■■□□ 2.06
CALM1-206ENST00000553630 ATP10BO94823 1461 aa27.88■■■□□ 2.05
CALM1-206ENST00000553630 ADCY10Q96PN6 1610 aa27.87■■■□□ 2.05
CALM1-206ENST00000553630 RIMBP3CA6NJZ7 1639 aa27.86■■■□□ 2.05
CALM1-206ENST00000553630 RIMBP3BA6NNM3 1639 aa27.86■■■□□ 2.05
CALM1-206ENST00000553630 RIMBP3Q9UFD9 1639 aa27.86■■■□□ 2.05
CALM1-206ENST00000553630 UHRF1BP1LA0JNW5 1464 aa27.86■■■□□ 2.05
CALM1-206ENST00000553630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.85■■■□□ 2.05
CALM1-206ENST00000553630 HNRNPUL2Q1KMD3 747 aaKnown RBP27.85■■■□□ 2.05
CALM1-206ENST00000553630 PCGF6Q9BYE7 350 aa27.85■■■□□ 2.05
CALM1-206ENST00000553630 SUPT6HQ7KZ85 1726 aaKnown RBP27.84■■■□□ 2.05
CALM1-206ENST00000553630 ZCCHC11Q5TAX3 1644 aaKnown RBP27.81■■■□□ 2.04
CALM1-206ENST00000553630 PHLDB1Q86UU1 1377 aa27.78■■■□□ 2.04
CALM1-206ENST00000553630 NCOA2Q15596 1464 aa27.77■■■□□ 2.04
CALM1-206ENST00000553630 KDM5BQ9UGL1 1544 aa27.75■■■□□ 2.03
CALM1-206ENST00000553630 TROQ12816 1431 aaPredicted RBP27.75■■■□□ 2.03
CALM1-206ENST00000553630 KIF14Q15058 1648 aa27.74■■■□□ 2.03
CALM1-206ENST00000553630 CDK11AQ9UQ88 783 aaPredicted RBP27.73■■■□□ 2.03
CALM1-206ENST00000553630 RRBP1Q9P2E9 1410 aaKnown RBP27.68■■■□□ 2.02
CALM1-206ENST00000553630 PLEKHD1A6NEE1 506 aa27.66■■■□□ 2.02
CALM1-206ENST00000553630 MYOM3Q5VTT5 1437 aa27.62■■■□□ 2.01
CALM1-206ENST00000553630 CCNB3Q8WWL7 1395 aa27.6■■■□□ 2.01
CALM1-206ENST00000553630 FGD6Q6ZV73 1430 aa27.6■■■□□ 2.01
CALM1-206ENST00000553630 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
CALM1-206ENST00000553630 ABCC10Q5T3U5 1492 aa27.56■■■□□ 2
CALM1-206ENST00000553630 CDC42BPAQ5VT25 1732 aa27.54■■■□□ 2
CALM1-206ENST00000553630 ITSN2Q9NZM3 1697 aa27.54■■■□□ 2
CALM1-206ENST00000553630 TTC37Q6PGP7 1564 aa27.53■■■□□ 2
CALM1-206ENST00000553630 PTPN23Q9H3S7 1636 aa27.53■■■□□ 2
CALM1-206ENST00000553630 WDR7Q9Y4E6 1490 aa27.52■■■□□ 2
CALM1-206ENST00000553630 ASXL2Q76L83 1435 aa27.5■■□□□ 1.99
CALM1-206ENST00000553630 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.5■■□□□ 1.994e-10■■■■□ 20.8
CALM1-206ENST00000553630 GPATCH8Q9UKJ3 1502 aaKnown RBP27.49■■□□□ 1.99
CALM1-206ENST00000553630 FAM50AQ14320 339 aaKnown RBP27.49■■□□□ 1.99
CALM1-206ENST00000553630 KCNH8Q96L42 1107 aa27.48■■□□□ 1.99
CALM1-206ENST00000553630 NPM1P06748 294 aaKnown RBP eCLIP27.47■■□□□ 1.99
CALM1-206ENST00000553630 MIA2Q96PC5 1412 aa27.44■■□□□ 1.98
CALM1-206ENST00000553630 PREX2Q70Z35 1606 aa27.44■■□□□ 1.98
CALM1-206ENST00000553630 TCOF1Q13428 1488 aaKnown RBP27.44■■□□□ 1.98
CALM1-206ENST00000553630 MYO5CQ9NQX4 1742 aa27.43■■□□□ 1.98
CALM1-206ENST00000553630 CDC42BPBQ9Y5S2 1711 aa27.42■■□□□ 1.98
CALM1-206ENST00000553630 ITGAEP38570 1179 aa27.4■■□□□ 1.98
CALM1-206ENST00000553630 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.4■■□□□ 1.981e-7■■■■□ 24.1
CALM1-206ENST00000553630 MAPKBP1O60336 1514 aa27.38■■□□□ 1.97
CALM1-206ENST00000553630 CAMSAP2Q08AD1 1489 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms