RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 CTTNBP2Q8WZ74 1663 aa31.53■■■□□ 2.64
PSEN1-207ENST00000553599 UBTFP17480 764 aaKnown RBP31.49■■■□□ 2.63
PSEN1-207ENST00000553599 IQGAP2Q13576 1575 aa31.48■■■□□ 2.63
PSEN1-207ENST00000553599 SHROOM2Q13796 1616 aa31.42■■■□□ 2.62
PSEN1-207ENST00000553599 EHMT2Q96KQ7 1210 aa31.41■■■□□ 2.62
PSEN1-207ENST00000553599 JPH4Q96JJ6 628 aa31.4■■■□□ 2.62
PSEN1-207ENST00000553599 TNIKQ9UKE5 1360 aa31.39■■■□□ 2.62
PSEN1-207ENST00000553599 UGGT2Q9NYU1 1516 aa31.35■■■□□ 2.61
PSEN1-207ENST00000553599 LOC105371045A0A1W2PR82 267 aa31.32■■■□□ 2.6
PSEN1-207ENST00000553599 PRG4Q92954 1404 aaPredicted RBP31.28■■■□□ 2.6
PSEN1-207ENST00000553599 CARMIL2Q6F5E8 1435 aa31.25■■■□□ 2.59
PSEN1-207ENST00000553599 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
PSEN1-207ENST00000553599 EFCAB5A4FU69 1503 aa31.2■■■□□ 2.59
PSEN1-207ENST00000553599 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
PSEN1-207ENST00000553599 DISP1Q96F81 1524 aa31.19■■■□□ 2.58
PSEN1-207ENST00000553599 SAMD9Q5K651 1589 aa31.17■■■□□ 2.58
PSEN1-207ENST00000553599 KIAA0556O60303 1618 aa31.16■■■□□ 2.58
PSEN1-207ENST00000553599 ERCC6L2Q5T890 1561 aa31.13■■■□□ 2.57
PSEN1-207ENST00000553599 RIMBP3CA6NJZ7 1639 aa31.11■■■□□ 2.57
PSEN1-207ENST00000553599 RIMBP3BA6NNM3 1639 aa31.11■■■□□ 2.57
PSEN1-207ENST00000553599 RIMBP3Q9UFD9 1639 aa31.11■■■□□ 2.57
PSEN1-207ENST00000553599 CLIP1P30622 1438 aa31.09■■■□□ 2.57
PSEN1-207ENST00000553599 CEP162Q5TB80 1403 aa31.09■■■□□ 2.57
PSEN1-207ENST00000553599 RANGAP1P46060 587 aaPredicted RBP31.09■■■□□ 2.57
PSEN1-207ENST00000553599 ARHGAP35Q9NRY4 1499 aa31.06■■■□□ 2.56
PSEN1-207ENST00000553599 PTPRGP23470 1445 aa31■■■□□ 2.55
PSEN1-207ENST00000553599 ARAP1Q96P48 1450 aa30.97■■■□□ 2.55
PSEN1-207ENST00000553599 P3H3Q8IVL6 736 aa30.97■■■□□ 2.55
PSEN1-207ENST00000553599 FHOD3Q2V2M9 1422 aa30.96■■■□□ 2.55
PSEN1-207ENST00000553599 FMN1Q68DA7 1419 aa30.9■■■□□ 2.54
PSEN1-207ENST00000553599 CYB5RLQ6IPT4 315 aa30.84■■■□□ 2.53
PSEN1-207ENST00000553599 TTBK1Q5TCY1 1321 aaPredicted RBP30.83■■■□□ 2.53
PSEN1-207ENST00000553599 UACAQ9BZF9 1416 aa30.82■■■□□ 2.52
PSEN1-207ENST00000553599 ABCA8O94911 1581 aa30.79■■■□□ 2.52
PSEN1-207ENST00000553599 UHRF1BP1LA0JNW5 1464 aa30.79■■■□□ 2.52
PSEN1-207ENST00000553599 ABCC2Q92887 1545 aa30.76■■■□□ 2.51
PSEN1-207ENST00000553599 PLB1Q6P1J6 1458 aa30.76■■■□□ 2.51
PSEN1-207ENST00000553599 RAPGEF6Q8TEU7 1601 aa30.75■■■□□ 2.51
PSEN1-207ENST00000553599 VPS8Q8N3P4 1428 aa30.71■■■□□ 2.51
PSEN1-207ENST00000553599 CASKIN1Q8WXD9 1431 aa30.7■■■□□ 2.5
PSEN1-207ENST00000553599 ADCY10Q96PN6 1610 aa30.69■■■□□ 2.5
PSEN1-207ENST00000553599 FYCO1Q9BQS8 1478 aa30.67■■■□□ 2.5
PSEN1-207ENST00000553599 HECW1Q76N89 1606 aa30.65■■■□□ 2.5
PSEN1-207ENST00000553599 PCF11O94913 1555 aaKnown RBP30.63■■■□□ 2.49
PSEN1-207ENST00000553599 NUP153P49790 1475 aaKnown RBP30.63■■■□□ 2.49
PSEN1-207ENST00000553599 KDM5BQ9UGL1 1544 aa30.62■■■□□ 2.49
PSEN1-207ENST00000553599 NPM1P06748 294 aaKnown RBP eCLIP30.6■■■□□ 2.49
PSEN1-207ENST00000553599 ATP1B4Q9UN42 357 aaPredicted RBP30.54■■■□□ 2.48
PSEN1-207ENST00000553599 CCDC18Q5T9S5 1454 aa30.54■■■□□ 2.48
PSEN1-207ENST00000553599 EPRSP07814 1512 aaKnown RBP30.53■■■□□ 2.48
PSEN1-207ENST00000553599 ATP10BO94823 1461 aa30.53■■■□□ 2.48
PSEN1-207ENST00000553599 ZCCHC11Q5TAX3 1644 aaKnown RBP30.51■■■□□ 2.48
PSEN1-207ENST00000553599 MAPKBP1O60336 1514 aa30.46■■■□□ 2.47
PSEN1-207ENST00000553599 LRRIQ1Q96JM4 1722 aa30.44■■■□□ 2.46
PSEN1-207ENST00000553599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.43■■■□□ 2.46
PSEN1-207ENST00000553599 HNRNPUL2Q1KMD3 747 aaKnown RBP30.43■■■□□ 2.46
PSEN1-207ENST00000553599 CDK13Q14004 1512 aaKnown RBP30.42■■■□□ 2.46
PSEN1-207ENST00000553599 ARID3CA6NKF2 412 aa30.42■■■□□ 2.46
PSEN1-207ENST00000553599 CDK11AQ9UQ88 783 aaPredicted RBP30.42■■■□□ 2.46
PSEN1-207ENST00000553599 MAP3K1Q13233 1512 aa30.42■■■□□ 2.46
PSEN1-207ENST00000553599 APLP2Q06481 763 aa30.38■■■□□ 2.45
PSEN1-207ENST00000553599 ASXL2Q76L83 1435 aa30.37■■■□□ 2.45
PSEN1-207ENST00000553599 PLEKHD1A6NEE1 506 aa30.36■■■□□ 2.45
PSEN1-207ENST00000553599 CFAP43Q8NDM7 1665 aa30.36■■■□□ 2.45
PSEN1-207ENST00000553599 TIAM1Q13009 1591 aa30.35■■■□□ 2.45
PSEN1-207ENST00000553599 WDR7Q9Y4E6 1490 aa30.34■■■□□ 2.45
PSEN1-207ENST00000553599 TROQ12816 1431 aaPredicted RBP30.28■■■□□ 2.44
PSEN1-207ENST00000553599 MTUS2Q5JR59 1369 aa30.24■■■□□ 2.43
PSEN1-207ENST00000553599 EHBP1L1Q8N3D4 1523 aa30.22■■■□□ 2.43
PSEN1-207ENST00000553599 ABCC10Q5T3U5 1492 aa30.21■■■□□ 2.43
PSEN1-207ENST00000553599 LRRC9Q6ZRR7 1453 aa30.21■■■□□ 2.43
PSEN1-207ENST00000553599 MAGI3Q5TCQ9 1506 aa30.21■■■□□ 2.43
PSEN1-207ENST00000553599 GLI2P10070 1586 aa30.16■■■□□ 2.42
PSEN1-207ENST00000553599 KIF14Q15058 1648 aa30.16■■■□□ 2.42
PSEN1-207ENST00000553599 KCNH8Q96L42 1107 aa30.16■■■□□ 2.42
PSEN1-207ENST00000553599 DIP2BQ9P265 1576 aa30.15■■■□□ 2.42
PSEN1-207ENST00000553599 KANK4Q5T7N3 995 aaPredicted RBP30.12■■■□□ 2.41
PSEN1-207ENST00000553599 FAM69CQ0P6D2 419 aa30.09■■■□□ 2.41
PSEN1-207ENST00000553599 ABCA9Q8IUA7 1624 aa30.09■■■□□ 2.41
PSEN1-207ENST00000553599 SUPT6HQ7KZ85 1726 aaKnown RBP30.08■■■□□ 2.41
PSEN1-207ENST00000553599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.06■■■□□ 2.4
PSEN1-207ENST00000553599 KIF13AQ9H1H9 1805 aa30.06■■■□□ 2.4
PSEN1-207ENST00000553599 NCOA2Q15596 1464 aa30.02■■■□□ 2.4
PSEN1-207ENST00000553599 MAP3K4Q9Y6R4 1608 aa30.01■■■□□ 2.39
PSEN1-207ENST00000553599 TRHP20396 242 aaPredicted RBP30.01■■■□□ 2.39
PSEN1-207ENST00000553599 TTC37Q6PGP7 1564 aa30■■■□□ 2.39
PSEN1-207ENST00000553599 CD109Q6YHK3 1445 aa29.99■■■□□ 2.39
PSEN1-207ENST00000553599 ARAP3Q8WWN8 1544 aa29.96■■■□□ 2.39
PSEN1-207ENST00000553599 CCNB3Q8WWL7 1395 aa29.95■■■□□ 2.39
PSEN1-207ENST00000553599 MYO5CQ9NQX4 1742 aa29.94■■■□□ 2.38
PSEN1-207ENST00000553599 PLCH2O75038 1416 aa29.93■■■□□ 2.38
PSEN1-207ENST00000553599 GPATCH8Q9UKJ3 1502 aaKnown RBP29.91■■■□□ 2.38
PSEN1-207ENST00000553599 ITSN2Q9NZM3 1697 aa29.9■■■□□ 2.38
PSEN1-207ENST00000553599 PREX2Q70Z35 1606 aa29.89■■■□□ 2.38
PSEN1-207ENST00000553599 CDC42BPAQ5VT25 1732 aa29.88■■■□□ 2.37
PSEN1-207ENST00000553599 TEX14Q8IWB6 1497 aa29.88■■■□□ 2.37
PSEN1-207ENST00000553599 MYOM3Q5VTT5 1437 aa29.86■■■□□ 2.37
PSEN1-207ENST00000553599 PPARGC1BQ86YN6 1023 aaKnown RBP29.85■■■□□ 2.37
PSEN1-207ENST00000553599 CFAP74Q9C0B2 1584 aa29.83■■■□□ 2.37
PSEN1-207ENST00000553599 PHLDB1Q86UU1 1377 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms