RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
BEST3-212ENST00000553096 RANGAP1P46060 587 aaPredicted RBP11□□□□□ -0.65
BEST3-212ENST00000553096 ARHGAP35Q9NRY4 1499 aa10.99□□□□□ -0.65
BEST3-212ENST00000553096 MRC2Q9UBG0 1479 aa10.98□□□□□ -0.65
BEST3-212ENST00000553096 ABCA5Q8WWZ7 1642 aa10.97□□□□□ -0.65
BEST3-212ENST00000553096 CTTNBP2Q8WZ74 1663 aa10.97□□□□□ -0.65
BEST3-212ENST00000553096 GTF3C3Q9Y5Q9 886 aa10.97□□□□□ -0.65
BEST3-212ENST00000553096 CUL7Q14999 1698 aa10.96□□□□□ -0.65
BEST3-212ENST00000553096 CARMIL1Q5VZK9 1371 aa10.95□□□□□ -0.66
BEST3-212ENST00000553096 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
BEST3-212ENST00000553096 EIF5BO60841 1220 aaKnown RBP10.93□□□□□ -0.66
BEST3-212ENST00000553096 WDR62O43379 1518 aa10.92□□□□□ -0.66
BEST3-212ENST00000553096 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
BEST3-212ENST00000553096 PBRM1Q86U86 1689 aa10.9□□□□□ -0.66
BEST3-212ENST00000553096 CFAP43Q8NDM7 1665 aa10.88□□□□□ -0.67
BEST3-212ENST00000553096 PCF11O94913 1555 aaKnown RBP10.88□□□□□ -0.67
BEST3-212ENST00000553096 KANK4Q5T7N3 995 aaPredicted RBP10.88□□□□□ -0.67
BEST3-212ENST00000553096 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
BEST3-212ENST00000553096 LRRIQ1Q96JM4 1722 aa10.86□□□□□ -0.67
BEST3-212ENST00000553096 GAPVD1Q14C86 1478 aa10.84□□□□□ -0.67
BEST3-212ENST00000553096 TDRD9Q8NDG6 1382 aaKnown RBP10.83□□□□□ -0.68
BEST3-212ENST00000553096 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
BEST3-212ENST00000553096 SAMD9Q5K651 1589 aa10.83□□□□□ -0.68
BEST3-212ENST00000553096 EFCAB5A4FU69 1503 aa10.82□□□□□ -0.68
BEST3-212ENST00000553096 MAP3K1Q13233 1512 aa10.82□□□□□ -0.68
BEST3-212ENST00000553096 RRBP1Q9P2E9 1410 aaKnown RBP10.81□□□□□ -0.68
BEST3-212ENST00000553096 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
BEST3-212ENST00000553096 FHOD3Q2V2M9 1422 aa10.8□□□□□ -0.68
BEST3-212ENST00000553096 ADAMTS12P58397 1594 aa10.79□□□□□ -0.68
BEST3-212ENST00000553096 ZNF608Q9ULD9 1512 aaPredicted RBP10.78□□□□□ -0.68
BEST3-212ENST00000553096 CLSPNQ9HAW4 1339 aa10.78□□□□□ -0.68
BEST3-212ENST00000553096 LRRC9Q6ZRR7 1453 aa10.77□□□□□ -0.68
BEST3-212ENST00000553096 SNAPC4Q5SXM2 1469 aa10.77□□□□□ -0.69
BEST3-212ENST00000553096 FYCO1Q9BQS8 1478 aa10.76□□□□□ -0.69
BEST3-212ENST00000553096 IFT140Q96RY7 1462 aa10.76□□□□□ -0.69
BEST3-212ENST00000553096 AQRO60306 1485 aaKnown RBP eCLIP10.75□□□□□ -0.69
BEST3-212ENST00000553096 P3H3Q8IVL6 736 aa10.75□□□□□ -0.69
BEST3-212ENST00000553096 FHAD1B1AJZ9 1412 aa10.75□□□□□ -0.69
BEST3-212ENST00000553096 CASKIN1Q8WXD9 1431 aa10.73□□□□□ -0.69
BEST3-212ENST00000553096 DNAJC5Q9H3Z4 198 aa10.73□□□□□ -0.69
BEST3-212ENST00000553096 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
BEST3-212ENST00000553096 PHLDB1Q86UU1 1377 aa10.72□□□□□ -0.69
BEST3-212ENST00000553096 CCNB3Q8WWL7 1395 aa10.72□□□□□ -0.69
BEST3-212ENST00000553096 MIER1Q8N108 512 aa10.71□□□□□ -0.69
BEST3-212ENST00000553096 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.69
BEST3-212ENST00000553096 IQGAP2Q13576 1575 aa10.7□□□□□ -0.7
BEST3-212ENST00000553096 GRIN2BQ13224 1484 aa10.7□□□□□ -0.7
BEST3-212ENST00000553096 FBLN2P98095 1184 aa10.68□□□□□ -0.7
BEST3-212ENST00000553096 DHX57Q6P158 1386 aaKnown RBP10.67□□□□□ -0.7
BEST3-212ENST00000553096 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
BEST3-212ENST00000553096 MAGI3Q5TCQ9 1506 aa10.66□□□□□ -0.7
BEST3-212ENST00000553096 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
BEST3-212ENST00000553096 UGGT2Q9NYU1 1516 aa10.63□□□□□ -0.71
BEST3-212ENST00000553096 SUPT6HQ7KZ85 1726 aaKnown RBP10.63□□□□□ -0.71
BEST3-212ENST00000553096 HECW1Q76N89 1606 aa10.62□□□□□ -0.71
BEST3-212ENST00000553096 KIAA0556O60303 1618 aa10.62□□□□□ -0.71
BEST3-212ENST00000553096 MAPKBP1O60336 1514 aa10.61□□□□□ -0.71
BEST3-212ENST00000553096 CEP170Q5SW79 1584 aa10.61□□□□□ -0.71
BEST3-212ENST00000553096 ARHGEF11O15085 1522 aa10.61□□□□□ -0.71
BEST3-212ENST00000553096 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
BEST3-212ENST00000553096 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
BEST3-212ENST00000553096 EHBP1L1Q8N3D4 1523 aa10.61□□□□□ -0.71
BEST3-212ENST00000553096 DISP1Q96F81 1524 aa10.6□□□□□ -0.71
BEST3-212ENST00000553096 RAB3GAP2Q9H2M9 1393 aa10.59□□□□□ -0.71
BEST3-212ENST00000553096 ITGAEP38570 1179 aa10.59□□□□□ -0.71
BEST3-212ENST00000553096 CHMP7Q8WUX9 453 aaPredicted RBP10.59□□□□□ -0.71
BEST3-212ENST00000553096 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
BEST3-212ENST00000553096 FGD6Q6ZV73 1430 aa10.58□□□□□ -0.72
BEST3-212ENST00000553096 NCOA2Q15596 1464 aa10.58□□□□□ -0.72
BEST3-212ENST00000553096 MAGI1Q96QZ7 1491 aaPredicted RBP10.57□□□□□ -0.72
BEST3-212ENST00000553096 CCDC18Q5T9S5 1454 aa10.57□□□□□ -0.72
BEST3-212ENST00000553096 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
BEST3-212ENST00000553096 KIAA0586Q9BVV6 1533 aa10.57□□□□□ -0.72
BEST3-212ENST00000553096 PTPN23Q9H3S7 1636 aa10.56□□□□□ -0.72
BEST3-212ENST00000553096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.55□□□□□ -0.72
BEST3-212ENST00000553096 SETD5Q9C0A6 1442 aa10.55□□□□□ -0.72
BEST3-212ENST00000553096 ANO8Q9HCE9 1232 aaPredicted RBP10.55□□□□□ -0.72
BEST3-212ENST00000553096 CHD1O14646 1710 aa10.55□□□□□ -0.72
BEST3-212ENST00000553096 PTPRKQ15262 1439 aa10.55□□□□□ -0.72
BEST3-212ENST00000553096 RAPGEF6Q8TEU7 1601 aa10.54□□□□□ -0.72
BEST3-212ENST00000553096 MTUS2Q5JR59 1369 aa10.54□□□□□ -0.72
BEST3-212ENST00000553096 UBE2Q2Q8WVN8 375 aa10.54□□□□□ -0.72
BEST3-212ENST00000553096 SYNJ2O15056 1496 aa10.54□□□□□ -0.72
BEST3-212ENST00000553096 FAM50AQ14320 339 aaKnown RBP10.54□□□□□ -0.72
BEST3-212ENST00000553096 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
BEST3-212ENST00000553096 ANP32EQ9BTT0 268 aa10.53□□□□□ -0.72
BEST3-212ENST00000553096 SUPT16HQ9Y5B9 1047 aaKnown RBP10.53□□□□□ -0.72
BEST3-212ENST00000553096 PODXL2Q9NZ53 605 aa10.52□□□□□ -0.73
BEST3-212ENST00000553096 GCC2Q8IWJ2 1684 aa10.51□□□□□ -0.73
BEST3-212ENST00000553096 NUP153P49790 1475 aaKnown RBP10.51□□□□□ -0.73
BEST3-212ENST00000553096 TCOF1Q13428 1488 aaKnown RBP10.5□□□□□ -0.73
BEST3-212ENST00000553096 NUP160Q12769 1436 aa10.5□□□□□ -0.73
BEST3-212ENST00000553096 KDM6BO15054 1643 aa10.48□□□□□ -0.73
BEST3-212ENST00000553096 HFM1A2PYH4 1435 aa10.47□□□□□ -0.73
BEST3-212ENST00000553096 ADCY10Q96PN6 1610 aa10.46□□□□□ -0.73
BEST3-212ENST00000553096 NAIPQ13075 1403 aa10.45□□□□□ -0.74
BEST3-212ENST00000553096 KIF14Q15058 1648 aa10.45□□□□□ -0.74
BEST3-212ENST00000553096 ARID3CA6NKF2 412 aa10.45□□□□□ -0.74
BEST3-212ENST00000553096 PLB1Q6P1J6 1458 aa10.45□□□□□ -0.74
BEST3-212ENST00000553096 CYB5RLQ6IPT4 315 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms