RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
MMP19-209ENST00000552872 GRIN2AQ12879 1464 aa16.21■□□□□ 0.19
MMP19-209ENST00000552872 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.19
MMP19-209ENST00000552872 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
MMP19-209ENST00000552872 TTBK1Q5TCY1 1321 aaPredicted RBP16.18■□□□□ 0.18
MMP19-209ENST00000552872 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
MMP19-209ENST00000552872 TNIKQ9UKE5 1360 aa16.16■□□□□ 0.18
MMP19-209ENST00000552872 CEP162Q5TB80 1403 aa16.16■□□□□ 0.18
MMP19-209ENST00000552872 CTTNBP2Q8WZ74 1663 aa16.14■□□□□ 0.17
MMP19-209ENST00000552872 CLIP1P30622 1438 aa16.09■□□□□ 0.17
MMP19-209ENST00000552872 IQGAP2Q13576 1575 aa16.06■□□□□ 0.16
MMP19-209ENST00000552872 NUP160Q12769 1436 aa16.06■□□□□ 0.16
MMP19-209ENST00000552872 PPARGC1BQ86YN6 1023 aaKnown RBP16.04■□□□□ 0.16
MMP19-209ENST00000552872 FHOD3Q2V2M9 1422 aa16.03■□□□□ 0.16
MMP19-209ENST00000552872 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
MMP19-209ENST00000552872 KIAA0586Q9BVV6 1533 aa16.03■□□□□ 0.16
MMP19-209ENST00000552872 JPH4Q96JJ6 628 aa16.02■□□□□ 0.16
MMP19-209ENST00000552872 ARAP1Q96P48 1450 aa16.01■□□□□ 0.15
MMP19-209ENST00000552872 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
MMP19-209ENST00000552872 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
MMP19-209ENST00000552872 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
MMP19-209ENST00000552872 ATP1B4Q9UN42 357 aaPredicted RBP15.99■□□□□ 0.15
MMP19-209ENST00000552872 PRG4Q92954 1404 aaPredicted RBP15.95■□□□□ 0.14
MMP19-209ENST00000552872 CLASP1Q7Z460 1538 aa15.95■□□□□ 0.14
MMP19-209ENST00000552872 DISP1Q96F81 1524 aa15.95■□□□□ 0.14
MMP19-209ENST00000552872 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
MMP19-209ENST00000552872 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
MMP19-209ENST00000552872 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
MMP19-209ENST00000552872 KIAA0556O60303 1618 aa15.91■□□□□ 0.14
MMP19-209ENST00000552872 SHROOM2Q13796 1616 aa15.87■□□□□ 0.13
MMP19-209ENST00000552872 EFCAB5A4FU69 1503 aa15.87■□□□□ 0.13
MMP19-209ENST00000552872 VPS8Q8N3P4 1428 aa15.85■□□□□ 0.13
MMP19-209ENST00000552872 CARMIL2Q6F5E8 1435 aa15.84■□□□□ 0.13
MMP19-209ENST00000552872 PCF11O94913 1555 aaKnown RBP15.84■□□□□ 0.13
MMP19-209ENST00000552872 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
MMP19-209ENST00000552872 PTPRGP23470 1445 aa15.79■□□□□ 0.12
MMP19-209ENST00000552872 LRRIQ1Q96JM4 1722 aa15.78■□□□□ 0.12
MMP19-209ENST00000552872 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.77■□□□□ 0.12
MMP19-209ENST00000552872 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.12
MMP19-209ENST00000552872 FMN1Q68DA7 1419 aa15.76■□□□□ 0.11
MMP19-209ENST00000552872 ARHGEF11O15085 1522 aa15.76■□□□□ 0.11
MMP19-209ENST00000552872 KANK4Q5T7N3 995 aaPredicted RBP15.76■□□□□ 0.11
MMP19-209ENST00000552872 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
MMP19-209ENST00000552872 CDK13Q14004 1512 aaKnown RBP15.74■□□□□ 0.11
MMP19-209ENST00000552872 APLP2Q06481 763 aa15.73■□□□□ 0.11
MMP19-209ENST00000552872 RIMBP3CA6NJZ7 1639 aa15.73■□□□□ 0.11
MMP19-209ENST00000552872 RIMBP3BA6NNM3 1639 aa15.73■□□□□ 0.11
MMP19-209ENST00000552872 RIMBP3Q9UFD9 1639 aa15.73■□□□□ 0.11
MMP19-209ENST00000552872 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
MMP19-209ENST00000552872 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
MMP19-209ENST00000552872 NUP153P49790 1475 aaKnown RBP15.7■□□□□ 0.1
MMP19-209ENST00000552872 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
MMP19-209ENST00000552872 FYCO1Q9BQS8 1478 aa15.69■□□□□ 0.1
MMP19-209ENST00000552872 ABCA8O94911 1581 aa15.67■□□□□ 0.1
MMP19-209ENST00000552872 UACAQ9BZF9 1416 aa15.66■□□□□ 0.1
MMP19-209ENST00000552872 HECW1Q76N89 1606 aa15.66■□□□□ 0.1
MMP19-209ENST00000552872 EPRSP07814 1512 aaKnown RBP15.66■□□□□ 0.1
MMP19-209ENST00000552872 TIAM1Q13009 1591 aa15.65■□□□□ 0.1
MMP19-209ENST00000552872 ADCY10Q96PN6 1610 aa15.64■□□□□ 0.09
MMP19-209ENST00000552872 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
MMP19-209ENST00000552872 ATP10BO94823 1461 aa15.62■□□□□ 0.09
MMP19-209ENST00000552872 CFAP43Q8NDM7 1665 aa15.61■□□□□ 0.09
MMP19-209ENST00000552872 ABCC2Q92887 1545 aa15.6■□□□□ 0.09
MMP19-209ENST00000552872 KCNH8Q96L42 1107 aa15.6■□□□□ 0.09
MMP19-209ENST00000552872 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
MMP19-209ENST00000552872 LRRC9Q6ZRR7 1453 aa15.58■□□□□ 0.09
MMP19-209ENST00000552872 ZCCHC11Q5TAX3 1644 aaKnown RBP15.57■□□□□ 0.08
MMP19-209ENST00000552872 CCDC18Q5T9S5 1454 aa15.55■□□□□ 0.08
MMP19-209ENST00000552872 KIF14Q15058 1648 aa15.53■□□□□ 0.08
MMP19-209ENST00000552872 PLEKHD1A6NEE1 506 aa15.52■□□□□ 0.08
MMP19-209ENST00000552872 PHLDB1Q86UU1 1377 aa15.51■□□□□ 0.07
MMP19-209ENST00000552872 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
MMP19-209ENST00000552872 UHRF1BP1LA0JNW5 1464 aa15.5■□□□□ 0.07
MMP19-209ENST00000552872 KDM5BQ9UGL1 1544 aa15.5■□□□□ 0.07
MMP19-209ENST00000552872 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
MMP19-209ENST00000552872 CDK11AQ9UQ88 783 aaPredicted RBP15.48■□□□□ 0.07
MMP19-209ENST00000552872 MAP3K1Q13233 1512 aa15.48■□□□□ 0.07
MMP19-209ENST00000552872 NCOA2Q15596 1464 aa15.48■□□□□ 0.07
MMP19-209ENST00000552872 ITGAEP38570 1179 aa15.47■□□□□ 0.07
MMP19-209ENST00000552872 ASXL2Q76L83 1435 aa15.47■□□□□ 0.07
MMP19-209ENST00000552872 EHBP1L1Q8N3D4 1523 aa15.46■□□□□ 0.07
MMP19-209ENST00000552872 TROQ12816 1431 aaPredicted RBP15.46■□□□□ 0.06
MMP19-209ENST00000552872 SUPT6HQ7KZ85 1726 aaKnown RBP15.45■□□□□ 0.06
MMP19-209ENST00000552872 ZEB1P37275 1124 aaPredicted RBP15.44■□□□□ 0.06
MMP19-209ENST00000552872 ZNF777Q9ULD5 760 aaPredicted RBP15.43■□□□□ 0.06
MMP19-209ENST00000552872 FAM50AQ14320 339 aaKnown RBP15.43■□□□□ 0.06
MMP19-209ENST00000552872 ZNF644Q9H582 1327 aaPredicted RBP15.42■□□□□ 0.06
MMP19-209ENST00000552872 TTC37Q6PGP7 1564 aa15.41■□□□□ 0.06
MMP19-209ENST00000552872 WDR7Q9Y4E6 1490 aa15.41■□□□□ 0.06
MMP19-209ENST00000552872 CCNB3Q8WWL7 1395 aa15.39■□□□□ 0.05
MMP19-209ENST00000552872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.38■□□□□ 0.05
MMP19-209ENST00000552872 CDC42BPAQ5VT25 1732 aa15.36■□□□□ 0.05
MMP19-209ENST00000552872 MYOM3Q5VTT5 1437 aa15.35■□□□□ 0.05
MMP19-209ENST00000552872 ABCC10Q5T3U5 1492 aa15.35■□□□□ 0.05
MMP19-209ENST00000552872 PRKCSHP14314 528 aaPredicted RBP15.35■□□□□ 0.05
MMP19-209ENST00000552872 CFDP1Q9UEE9 299 aaPredicted RBP15.35■□□□□ 0.05
MMP19-209ENST00000552872 GPATCH8Q9UKJ3 1502 aaKnown RBP15.35■□□□□ 0.05
MMP19-209ENST00000552872 FAM69CQ0P6D2 419 aa15.34■□□□□ 0.05
MMP19-209ENST00000552872 FGD6Q6ZV73 1430 aa15.34■□□□□ 0.05
MMP19-209ENST00000552872 TSPOAP1O95153 1857 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms