RNA–Protein interactions for RNA: ENST00000552818.1

PFKM-229, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-229ENST00000552818 TNIKQ9UKE5 1360 aa15.57■□□□□ 0.08
PFKM-229ENST00000552818 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
PFKM-229ENST00000552818 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.08
PFKM-229ENST00000552818 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
PFKM-229ENST00000552818 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
PFKM-229ENST00000552818 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
PFKM-229ENST00000552818 CARMIL1Q5VZK9 1371 aa15.5■□□□□ 0.07
PFKM-229ENST00000552818 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
PFKM-229ENST00000552818 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
PFKM-229ENST00000552818 SLC24A1O60721 1099 aa15.43■□□□□ 0.06
PFKM-229ENST00000552818 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
PFKM-229ENST00000552818 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
PFKM-229ENST00000552818 FHAD1B1AJZ9 1412 aa15.39■□□□□ 0.05
PFKM-229ENST00000552818 CLIP1P30622 1438 aa15.38■□□□□ 0.05
PFKM-229ENST00000552818 ARAP1Q96P48 1450 aa15.37■□□□□ 0.05
PFKM-229ENST00000552818 MAGI1Q96QZ7 1491 aaPredicted RBP15.36■□□□□ 0.05
PFKM-229ENST00000552818 ARHGAP35Q9NRY4 1499 aa15.34■□□□□ 0.05
PFKM-229ENST00000552818 RTN4Q9NQC3 1192 aaKnown RBP15.33■□□□□ 0.04
PFKM-229ENST00000552818 CHD1O14646 1710 aa15.33■□□□□ 0.04
PFKM-229ENST00000552818 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
PFKM-229ENST00000552818 SAMD9Q5K651 1589 aa15.32■□□□□ 0.04
PFKM-229ENST00000552818 CEP170Q5SW79 1584 aa15.31■□□□□ 0.04
PFKM-229ENST00000552818 SYNJ2O15056 1496 aa15.3■□□□□ 0.04
PFKM-229ENST00000552818 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
PFKM-229ENST00000552818 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
PFKM-229ENST00000552818 AMER1Q5JTC6 1135 aaPredicted RBP15.26■□□□□ 0.03
PFKM-229ENST00000552818 EFCAB5A4FU69 1503 aa15.26■□□□□ 0.03
PFKM-229ENST00000552818 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
PFKM-229ENST00000552818 NUP160Q12769 1436 aa15.23■□□□□ 0.03
PFKM-229ENST00000552818 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.03
PFKM-229ENST00000552818 KIAA0586Q9BVV6 1533 aa15.2■□□□□ 0.02
PFKM-229ENST00000552818 LRRIQ1Q96JM4 1722 aa15.2■□□□□ 0.02
PFKM-229ENST00000552818 RANGAP1P46060 587 aaPredicted RBP15.19■□□□□ 0.02
PFKM-229ENST00000552818 PCF11O94913 1555 aaKnown RBP15.19■□□□□ 0.02
PFKM-229ENST00000552818 FHOD3Q2V2M9 1422 aa15.17■□□□□ 0.02
PFKM-229ENST00000552818 KIAA0556O60303 1618 aa15.16■□□□□ 0.02
PFKM-229ENST00000552818 DISP1Q96F81 1524 aa15.15■□□□□ 0.02
PFKM-229ENST00000552818 CFAP43Q8NDM7 1665 aa15.14■□□□□ 0.01
PFKM-229ENST00000552818 RNF216Q9NWF9 866 aaPredicted RBP15.14■□□□□ 0.01
PFKM-229ENST00000552818 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
PFKM-229ENST00000552818 MSH5O43196 834 aa15.11■□□□□ 0.01
PFKM-229ENST00000552818 CLASP1Q7Z460 1538 aa15.11■□□□□ 0.01
PFKM-229ENST00000552818 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
PFKM-229ENST00000552818 TIAM1Q13009 1591 aa15.07■□□□□ 0
PFKM-229ENST00000552818 FYCO1Q9BQS8 1478 aa15.07■□□□□ 0
PFKM-229ENST00000552818 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
PFKM-229ENST00000552818 P3H3Q8IVL6 736 aa15.05■□□□□ -0
PFKM-229ENST00000552818 CASKIN1Q8WXD9 1431 aa15.05■□□□□ -0
PFKM-229ENST00000552818 MAP3K1Q13233 1512 aa15.05■□□□□ -0
PFKM-229ENST00000552818 PPARGC1BQ86YN6 1023 aaKnown RBP15.04■□□□□ -0
PFKM-229ENST00000552818 FBLN2P98095 1184 aa15.03■□□□□ -0
PFKM-229ENST00000552818 FMN1Q68DA7 1419 aa15.02■□□□□ -0
PFKM-229ENST00000552818 ERCC6L2Q5T890 1561 aa15.01□□□□□ -0.01
PFKM-229ENST00000552818 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
PFKM-229ENST00000552818 RAPGEF6Q8TEU7 1601 aa14.99□□□□□ -0.01
PFKM-229ENST00000552818 KANK4Q5T7N3 995 aaPredicted RBP14.96□□□□□ -0.01
PFKM-229ENST00000552818 ABCA8O94911 1581 aa14.95□□□□□ -0.02
PFKM-229ENST00000552818 JPH4Q96JJ6 628 aa14.95□□□□□ -0.02
PFKM-229ENST00000552818 MAGI3Q5TCQ9 1506 aa14.95□□□□□ -0.02
PFKM-229ENST00000552818 LRRC9Q6ZRR7 1453 aa14.95□□□□□ -0.02
PFKM-229ENST00000552818 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
PFKM-229ENST00000552818 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
PFKM-229ENST00000552818 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
PFKM-229ENST00000552818 NUP153P49790 1475 aaKnown RBP14.93□□□□□ -0.02
PFKM-229ENST00000552818 CDK13Q14004 1512 aaKnown RBP14.92□□□□□ -0.02
PFKM-229ENST00000552818 PCGF6Q9BYE7 350 aa14.91□□□□□ -0.02
PFKM-229ENST00000552818 EPRSP07814 1512 aaKnown RBP14.91□□□□□ -0.02
PFKM-229ENST00000552818 CARMIL2Q6F5E8 1435 aa14.91□□□□□ -0.02
PFKM-229ENST00000552818 TTBK1Q5TCY1 1321 aaPredicted RBP14.91□□□□□ -0.02
PFKM-229ENST00000552818 PLB1Q6P1J6 1458 aa14.9□□□□□ -0.02
PFKM-229ENST00000552818 FKBP8Q14318 412 aa14.89□□□□□ -0.03
PFKM-229ENST00000552818 CCDC18Q5T9S5 1454 aa14.89□□□□□ -0.03
PFKM-229ENST00000552818 ARHGEF11O15085 1522 aa14.86□□□□□ -0.03
PFKM-229ENST00000552818 EHBP1L1Q8N3D4 1523 aa14.86□□□□□ -0.03
PFKM-229ENST00000552818 HOXD11P31277 338 aaPredicted RBP14.84□□□□□ -0.03
PFKM-229ENST00000552818 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.03
PFKM-229ENST00000552818 APLP2Q06481 763 aa14.83□□□□□ -0.04
PFKM-229ENST00000552818 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
PFKM-229ENST00000552818 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
PFKM-229ENST00000552818 ADCY10Q96PN6 1610 aa14.81□□□□□ -0.04
PFKM-229ENST00000552818 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
PFKM-229ENST00000552818 ABCC2Q92887 1545 aa14.78□□□□□ -0.04
PFKM-229ENST00000552818 PTPRGP23470 1445 aa14.78□□□□□ -0.04
PFKM-229ENST00000552818 KIF14Q15058 1648 aa14.77□□□□□ -0.04
PFKM-229ENST00000552818 NCOA2Q15596 1464 aa14.77□□□□□ -0.04
PFKM-229ENST00000552818 ATP1B4Q9UN42 357 aaPredicted RBP14.77□□□□□ -0.05
PFKM-229ENST00000552818 DMRT2Q9Y5R5 561 aa14.77□□□□□ -0.05
PFKM-229ENST00000552818 ATP10BO94823 1461 aa14.76□□□□□ -0.05
PFKM-229ENST00000552818 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
PFKM-229ENST00000552818 ZCCHC11Q5TAX3 1644 aaKnown RBP14.75□□□□□ -0.05
PFKM-229ENST00000552818 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
PFKM-229ENST00000552818 UHRF1BP1LA0JNW5 1464 aa14.74□□□□□ -0.05
PFKM-229ENST00000552818 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
PFKM-229ENST00000552818 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
PFKM-229ENST00000552818 CDC42BPAQ5VT25 1732 aa14.72□□□□□ -0.05
PFKM-229ENST00000552818 ARID3CA6NKF2 412 aa14.71□□□□□ -0.05
PFKM-229ENST00000552818 TROQ12816 1431 aaPredicted RBP14.7□□□□□ -0.06
PFKM-229ENST00000552818 CCNB3Q8WWL7 1395 aa14.7□□□□□ -0.06
PFKM-229ENST00000552818 MYOM3Q5VTT5 1437 aa14.69□□□□□ -0.06
PFKM-229ENST00000552818 FGD6Q6ZV73 1430 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms