RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
LINC00661-206ENST00000552608 IQGAP2Q13576 1575 aa17.28■□□□□ 0.36
LINC00661-206ENST00000552608 CHD1O14646 1710 aa17.27■□□□□ 0.36
LINC00661-206ENST00000552608 RANGAP1P46060 587 aaPredicted RBP17.27■□□□□ 0.36
LINC00661-206ENST00000552608 FBLN2P98095 1184 aa17.25■□□□□ 0.35
LINC00661-206ENST00000552608 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
LINC00661-206ENST00000552608 ARHGAP35Q9NRY4 1499 aa17.24■□□□□ 0.35
LINC00661-206ENST00000552608 CEP170Q5SW79 1584 aa17.22■□□□□ 0.35
LINC00661-206ENST00000552608 VPS8Q8N3P4 1428 aa17.21■□□□□ 0.35
LINC00661-206ENST00000552608 SAMD9Q5K651 1589 aa17.21■□□□□ 0.35
LINC00661-206ENST00000552608 NUP160Q12769 1436 aa17.21■□□□□ 0.34
LINC00661-206ENST00000552608 ARAP1Q96P48 1450 aa17.19■□□□□ 0.34
LINC00661-206ENST00000552608 UGGT2Q9NYU1 1516 aa17.17■□□□□ 0.34
LINC00661-206ENST00000552608 APLP2Q06481 763 aa17.12■□□□□ 0.33
LINC00661-206ENST00000552608 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
LINC00661-206ENST00000552608 FHOD3Q2V2M9 1422 aa17.1■□□□□ 0.33
LINC00661-206ENST00000552608 KIAA0556O60303 1618 aa17.1■□□□□ 0.33
LINC00661-206ENST00000552608 CARMIL2Q6F5E8 1435 aa17.08■□□□□ 0.32
LINC00661-206ENST00000552608 P3H3Q8IVL6 736 aa17.07■□□□□ 0.32
LINC00661-206ENST00000552608 SHROOM2Q13796 1616 aa17.04■□□□□ 0.32
LINC00661-206ENST00000552608 PCF11O94913 1555 aaKnown RBP17.04■□□□□ 0.32
LINC00661-206ENST00000552608 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
LINC00661-206ENST00000552608 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
LINC00661-206ENST00000552608 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
LINC00661-206ENST00000552608 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.32
LINC00661-206ENST00000552608 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
LINC00661-206ENST00000552608 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
LINC00661-206ENST00000552608 MAP3K1Q13233 1512 aa16.99■□□□□ 0.31
LINC00661-206ENST00000552608 HECW1Q76N89 1606 aa16.99■□□□□ 0.31
LINC00661-206ENST00000552608 TIAM1Q13009 1591 aa16.97■□□□□ 0.31
LINC00661-206ENST00000552608 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.31
LINC00661-206ENST00000552608 RAPGEF6Q8TEU7 1601 aa16.94■□□□□ 0.3
LINC00661-206ENST00000552608 ATP1B4Q9UN42 357 aaPredicted RBP16.93■□□□□ 0.3
LINC00661-206ENST00000552608 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
LINC00661-206ENST00000552608 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
LINC00661-206ENST00000552608 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
LINC00661-206ENST00000552608 LRRIQ1Q96JM4 1722 aa16.9■□□□□ 0.3
LINC00661-206ENST00000552608 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
LINC00661-206ENST00000552608 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
LINC00661-206ENST00000552608 PTPRGP23470 1445 aa16.86■□□□□ 0.29
LINC00661-206ENST00000552608 LRRC9Q6ZRR7 1453 aa16.85■□□□□ 0.29
LINC00661-206ENST00000552608 EPRSP07814 1512 aaKnown RBP16.84■□□□□ 0.29
LINC00661-206ENST00000552608 ABCA8O94911 1581 aa16.84■□□□□ 0.29
LINC00661-206ENST00000552608 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
LINC00661-206ENST00000552608 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
LINC00661-206ENST00000552608 NUP153P49790 1475 aaKnown RBP16.8■□□□□ 0.28
LINC00661-206ENST00000552608 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
LINC00661-206ENST00000552608 SUPT6HQ7KZ85 1726 aaKnown RBP16.79■□□□□ 0.28
LINC00661-206ENST00000552608 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
LINC00661-206ENST00000552608 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
LINC00661-206ENST00000552608 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
LINC00661-206ENST00000552608 UACAQ9BZF9 1416 aa16.78■□□□□ 0.28
LINC00661-206ENST00000552608 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.28
LINC00661-206ENST00000552608 CDK11AQ9UQ88 783 aaPredicted RBP16.77■□□□□ 0.28
LINC00661-206ENST00000552608 ABCC2Q92887 1545 aa16.75■□□□□ 0.27
LINC00661-206ENST00000552608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
LINC00661-206ENST00000552608 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
LINC00661-206ENST00000552608 UHRF1BP1LA0JNW5 1464 aa16.72■□□□□ 0.27
LINC00661-206ENST00000552608 ADCY10Q96PN6 1610 aa16.68■□□□□ 0.26
LINC00661-206ENST00000552608 MAGI3Q5TCQ9 1506 aa16.68■□□□□ 0.26
LINC00661-206ENST00000552608 ATP10BO94823 1461 aa16.67■□□□□ 0.26
LINC00661-206ENST00000552608 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
LINC00661-206ENST00000552608 ARID3CA6NKF2 412 aa16.67■□□□□ 0.26
LINC00661-206ENST00000552608 TROQ12816 1431 aaPredicted RBP16.66■□□□□ 0.26
LINC00661-206ENST00000552608 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
LINC00661-206ENST00000552608 PLEKHD1A6NEE1 506 aa16.65■□□□□ 0.26
LINC00661-206ENST00000552608 ZCCHC11Q5TAX3 1644 aaKnown RBP16.65■□□□□ 0.26
LINC00661-206ENST00000552608 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
LINC00661-206ENST00000552608 KIF14Q15058 1648 aa16.63■□□□□ 0.25
LINC00661-206ENST00000552608 ITSN2Q9NZM3 1697 aa16.63■□□□□ 0.25
LINC00661-206ENST00000552608 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
LINC00661-206ENST00000552608 KDM5BQ9UGL1 1544 aa16.62■□□□□ 0.25
LINC00661-206ENST00000552608 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
LINC00661-206ENST00000552608 MYOM3Q5VTT5 1437 aa16.61■□□□□ 0.25
LINC00661-206ENST00000552608 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
LINC00661-206ENST00000552608 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
LINC00661-206ENST00000552608 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
LINC00661-206ENST00000552608 FGD6Q6ZV73 1430 aa16.57■□□□□ 0.24
LINC00661-206ENST00000552608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC00661-206ENST00000552608 MIA2Q96PC5 1412 aa16.55■□□□□ 0.24
LINC00661-206ENST00000552608 NPM1P06748 294 aaKnown RBP eCLIP16.55■□□□□ 0.24
LINC00661-206ENST00000552608 PTPN23Q9H3S7 1636 aa16.55■□□□□ 0.24
LINC00661-206ENST00000552608 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.24
LINC00661-206ENST00000552608 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
LINC00661-206ENST00000552608 AEBP2Q6ZN18 517 aaPredicted RBP16.51■□□□□ 0.23
LINC00661-206ENST00000552608 TCOF1Q13428 1488 aaKnown RBP16.5■□□□□ 0.23
LINC00661-206ENST00000552608 ABCC10Q5T3U5 1492 aa16.5■□□□□ 0.23
LINC00661-206ENST00000552608 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
LINC00661-206ENST00000552608 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
LINC00661-206ENST00000552608 WDR7Q9Y4E6 1490 aa16.48■□□□□ 0.23
LINC00661-206ENST00000552608 GPATCH8Q9UKJ3 1502 aaKnown RBP16.47■□□□□ 0.23
LINC00661-206ENST00000552608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.45■□□□□ 0.22
LINC00661-206ENST00000552608 TTC37Q6PGP7 1564 aa16.44■□□□□ 0.22
LINC00661-206ENST00000552608 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
LINC00661-206ENST00000552608 CDC42BPBQ9Y5S2 1711 aa16.44■□□□□ 0.22
LINC00661-206ENST00000552608 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
LINC00661-206ENST00000552608 ASXL2Q76L83 1435 aa16.43■□□□□ 0.22
LINC00661-206ENST00000552608 ITGAEP38570 1179 aa16.42■□□□□ 0.22
LINC00661-206ENST00000552608 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
LINC00661-206ENST00000552608 CAMSAP2Q08AD1 1489 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms