RNA–Protein interactions for RNA: ENST00000552387.1

ITGA5-209, Transcript of integrin subunit alpha 5, humanhuman

TSL 2

Gene ITGA5, Length 1,333 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-209ENST00000552387 SHROOM2Q13796 1616 aa19.09■□□□□ 0.65
ITGA5-209ENST00000552387 KIAA0586Q9BVV6 1533 aa19.07■□□□□ 0.64
ITGA5-209ENST00000552387 CTTNBP2Q8WZ74 1663 aa19.06■□□□□ 0.64
ITGA5-209ENST00000552387 ERCC6L2Q5T890 1561 aa19.05■□□□□ 0.64
ITGA5-209ENST00000552387 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
ITGA5-209ENST00000552387 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
ITGA5-209ENST00000552387 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
ITGA5-209ENST00000552387 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
ITGA5-209ENST00000552387 IQGAP2Q13576 1575 aa19.03■□□□□ 0.64
ITGA5-209ENST00000552387 GOLGA3Q08378 1498 aa18.99■□□□□ 0.63
ITGA5-209ENST00000552387 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
ITGA5-209ENST00000552387 PRG4Q92954 1404 aaPredicted RBP18.95■□□□□ 0.62
ITGA5-209ENST00000552387 JPH4Q96JJ6 628 aa18.95■□□□□ 0.62
ITGA5-209ENST00000552387 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
ITGA5-209ENST00000552387 UGGT2Q9NYU1 1516 aa18.94■□□□□ 0.62
ITGA5-209ENST00000552387 DISP1Q96F81 1524 aa18.91■□□□□ 0.62
ITGA5-209ENST00000552387 KIAA0556O60303 1618 aa18.88■□□□□ 0.61
ITGA5-209ENST00000552387 SAMD9Q5K651 1589 aa18.84■□□□□ 0.61
ITGA5-209ENST00000552387 UBTFP17480 764 aaKnown RBP18.82■□□□□ 0.6
ITGA5-209ENST00000552387 CARMIL2Q6F5E8 1435 aa18.79■□□□□ 0.6
ITGA5-209ENST00000552387 LOC105371045A0A1W2PR82 267 aa18.77■□□□□ 0.6
ITGA5-209ENST00000552387 TNIKQ9UKE5 1360 aa18.77■□□□□ 0.6
ITGA5-209ENST00000552387 CYB5RLQ6IPT4 315 aa18.75■□□□□ 0.59
ITGA5-209ENST00000552387 EFCAB5A4FU69 1503 aa18.75■□□□□ 0.59
ITGA5-209ENST00000552387 RANGAP1P46060 587 aaPredicted RBP18.74■□□□□ 0.59
ITGA5-209ENST00000552387 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
ITGA5-209ENST00000552387 PTPRGP23470 1445 aa18.72■□□□□ 0.59
ITGA5-209ENST00000552387 FHOD3Q2V2M9 1422 aa18.72■□□□□ 0.59
ITGA5-209ENST00000552387 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
ITGA5-209ENST00000552387 ADCY10Q96PN6 1610 aa18.7■□□□□ 0.58
ITGA5-209ENST00000552387 TTBK1Q5TCY1 1321 aaPredicted RBP18.68■□□□□ 0.58
ITGA5-209ENST00000552387 ABCA8O94911 1581 aa18.66■□□□□ 0.58
ITGA5-209ENST00000552387 CLIP1P30622 1438 aa18.65■□□□□ 0.58
ITGA5-209ENST00000552387 CEP162Q5TB80 1403 aa18.65■□□□□ 0.58
ITGA5-209ENST00000552387 PLB1Q6P1J6 1458 aa18.65■□□□□ 0.58
ITGA5-209ENST00000552387 ABCC2Q92887 1545 aa18.62■□□□□ 0.57
ITGA5-209ENST00000552387 UACAQ9BZF9 1416 aa18.62■□□□□ 0.57
ITGA5-209ENST00000552387 UHRF1BP1LA0JNW5 1464 aa18.62■□□□□ 0.57
ITGA5-209ENST00000552387 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.57
ITGA5-209ENST00000552387 RAPGEF6Q8TEU7 1601 aa18.58■□□□□ 0.57
ITGA5-209ENST00000552387 KDM5BQ9UGL1 1544 aa18.54■□□□□ 0.56
ITGA5-209ENST00000552387 ZCCHC11Q5TAX3 1644 aaKnown RBP18.54■□□□□ 0.56
ITGA5-209ENST00000552387 NUP153P49790 1475 aaKnown RBP18.53■□□□□ 0.56
ITGA5-209ENST00000552387 PCF11O94913 1555 aaKnown RBP18.53■□□□□ 0.56
ITGA5-209ENST00000552387 FMN1Q68DA7 1419 aa18.51■□□□□ 0.55
ITGA5-209ENST00000552387 LRRIQ1Q96JM4 1722 aa18.5■□□□□ 0.55
ITGA5-209ENST00000552387 MAPKBP1O60336 1514 aa18.48■□□□□ 0.55
ITGA5-209ENST00000552387 HECW1Q76N89 1606 aa18.47■□□□□ 0.55
ITGA5-209ENST00000552387 ATP10BO94823 1461 aa18.47■□□□□ 0.55
ITGA5-209ENST00000552387 ARID3CA6NKF2 412 aa18.46■□□□□ 0.55
ITGA5-209ENST00000552387 CDK13Q14004 1512 aaKnown RBP18.45■□□□□ 0.54
ITGA5-209ENST00000552387 CASKIN1Q8WXD9 1431 aa18.44■□□□□ 0.54
ITGA5-209ENST00000552387 FYCO1Q9BQS8 1478 aa18.42■□□□□ 0.54
ITGA5-209ENST00000552387 ASXL2Q76L83 1435 aa18.42■□□□□ 0.54
ITGA5-209ENST00000552387 EPRSP07814 1512 aaKnown RBP18.41■□□□□ 0.54
ITGA5-209ENST00000552387 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
ITGA5-209ENST00000552387 KIF13AQ9H1H9 1805 aa18.39■□□□□ 0.53
ITGA5-209ENST00000552387 DIP2BQ9P265 1576 aa18.38■□□□□ 0.53
ITGA5-209ENST00000552387 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
ITGA5-209ENST00000552387 WDR7Q9Y4E6 1490 aa18.37■□□□□ 0.53
ITGA5-209ENST00000552387 ABCC10Q5T3U5 1492 aa18.35■□□□□ 0.53
ITGA5-209ENST00000552387 MAGI3Q5TCQ9 1506 aa18.33■□□□□ 0.53
ITGA5-209ENST00000552387 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.53
ITGA5-209ENST00000552387 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
ITGA5-209ENST00000552387 CCDC18Q5T9S5 1454 aa18.32■□□□□ 0.52
ITGA5-209ENST00000552387 CFAP43Q8NDM7 1665 aa18.3■□□□□ 0.52
ITGA5-209ENST00000552387 GLI2P10070 1586 aa18.29■□□□□ 0.52
ITGA5-209ENST00000552387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.52
ITGA5-209ENST00000552387 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.52
ITGA5-209ENST00000552387 TIAM1Q13009 1591 aa18.26■□□□□ 0.51
ITGA5-209ENST00000552387 KIF14Q15058 1648 aa18.26■□□□□ 0.51
ITGA5-209ENST00000552387 MAP3K4Q9Y6R4 1608 aa18.25■□□□□ 0.51
ITGA5-209ENST00000552387 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
ITGA5-209ENST00000552387 PPRC1Q5VV67 1664 aaKnown RBP18.24■□□□□ 0.51
ITGA5-209ENST00000552387 TROQ12816 1431 aaPredicted RBP18.24■□□□□ 0.51
ITGA5-209ENST00000552387 FAM69CQ0P6D2 419 aa18.23■□□□□ 0.51
ITGA5-209ENST00000552387 ABCA9Q8IUA7 1624 aa18.23■□□□□ 0.51
ITGA5-209ENST00000552387 TTC37Q6PGP7 1564 aa18.23■□□□□ 0.51
ITGA5-209ENST00000552387 KCNH8Q96L42 1107 aa18.22■□□□□ 0.51
ITGA5-209ENST00000552387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.21■□□□□ 0.51
ITGA5-209ENST00000552387 PLEKHD1A6NEE1 506 aa18.21■□□□□ 0.51
ITGA5-209ENST00000552387 TSPOAP1O95153 1857 aa18.19■□□□□ 0.5
ITGA5-209ENST00000552387 MAP3K1Q13233 1512 aa18.19■□□□□ 0.5
ITGA5-209ENST00000552387 EHBP1L1Q8N3D4 1523 aa18.17■□□□□ 0.5
ITGA5-209ENST00000552387 LRRC9Q6ZRR7 1453 aa18.14■□□□□ 0.49
ITGA5-209ENST00000552387 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.49
ITGA5-209ENST00000552387 KANK4Q5T7N3 995 aaPredicted RBP18.13■□□□□ 0.49
ITGA5-209ENST00000552387 CD109Q6YHK3 1445 aa18.12■□□□□ 0.49
ITGA5-209ENST00000552387 MTUS2Q5JR59 1369 aa18.12■□□□□ 0.49
ITGA5-209ENST00000552387 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
ITGA5-209ENST00000552387 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
ITGA5-209ENST00000552387 SUPT6HQ7KZ85 1726 aaKnown RBP18.08■□□□□ 0.48
ITGA5-209ENST00000552387 PREX2Q70Z35 1606 aa18.07■□□□□ 0.48
ITGA5-209ENST00000552387 CDC42BPBQ9Y5S2 1711 aa18.07■□□□□ 0.48
ITGA5-209ENST00000552387 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
ITGA5-209ENST00000552387 PLCH2O75038 1416 aa18.05■□□□□ 0.48
ITGA5-209ENST00000552387 ARAP3Q8WWN8 1544 aa18.05■□□□□ 0.48
ITGA5-209ENST00000552387 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
ITGA5-209ENST00000552387 TEX14Q8IWB6 1497 aa18.03■□□□□ 0.48
ITGA5-209ENST00000552387 COL17A1Q9UMD9 1497 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms